Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17i04
(788 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023603-1|AAY85003.1| 206|Drosophila melanogaster IP06581p pro... 81 2e-15
AE014297-2612|AAF55622.1| 200|Drosophila melanogaster CG14286-P... 81 2e-15
AE014134-625|AAF51094.1| 676|Drosophila melanogaster CG3213-PA ... 33 0.44
BT028796-1|ABI34177.1| 516|Drosophila melanogaster IP16073p pro... 31 2.4
AE013599-120|AAF57300.2| 516|Drosophila melanogaster CG7882-PA,... 31 2.4
AE013599-119|AAM68334.1| 586|Drosophila melanogaster CG7882-PB,... 31 2.4
AY058630-1|AAL13859.1| 487|Drosophila melanogaster LD32783p pro... 30 4.1
AF025540-1|AAC14018.1| 487|Drosophila melanogaster zinc finger ... 30 4.1
AE014134-2742|AAF53549.1| 487|Drosophila melanogaster CG4694-PA... 30 4.1
BT011041-1|AAR31112.1| 517|Drosophila melanogaster SD19826p pro... 29 5.5
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 29 5.5
AY129439-1|AAM76181.1| 751|Drosophila melanogaster LD08185p pro... 29 5.5
AY119103-1|AAM50963.1| 853|Drosophila melanogaster RE06730p pro... 29 5.5
AY060663-1|AAL28211.1| 517|Drosophila melanogaster GH08870p pro... 29 5.5
AE014297-4069|AAF56667.1| 517|Drosophila melanogaster CG6070-PA... 29 5.5
AE014297-2882|AAF55818.1| 853|Drosophila melanogaster CG3822-PA... 29 5.5
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 29 5.5
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 29 5.5
AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-P... 29 9.6
AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-P... 29 9.6
>BT023603-1|AAY85003.1| 206|Drosophila melanogaster IP06581p
protein.
Length = 206
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Frame = -1
Query: 758 LHNKGKSTSLQKPCKID---KHESEGVDPE----ESLRQFQLELCWCIQQLERTLNEKKG 600
+H + + S+ KP I K + +P + + QF++ELCWC+QQL+ L+ K
Sbjct: 7 MHKRRTAKSINKPPPIQGAIKKPTPVAEPPSIDADLVTQFEVELCWCVQQLQTALDSGKL 66
Query: 599 NEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKL 459
+K ++T K + VL ++ P+IRKRQ+M+ GDYRAKM EE+KL
Sbjct: 67 AQKVAEDTAKNIKVLTSSTAPLIRKRQVMKLALGDYRAKMQQEEQKL 113
>AE014297-2612|AAF55622.1| 200|Drosophila melanogaster CG14286-PA
protein.
Length = 200
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Frame = -1
Query: 758 LHNKGKSTSLQKPCKID---KHESEGVDPE----ESLRQFQLELCWCIQQLERTLNEKKG 600
+H + + S+ KP I K + +P + + QF++ELCWC+QQL+ L+ K
Sbjct: 1 MHKRRTAKSINKPPPIQGAIKKPTPVAEPPSIDADLVTQFEVELCWCVQQLQTALDSGKL 60
Query: 599 NEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKL 459
+K ++T K + VL ++ P+IRKRQ+M+ GDYRAKM EE+KL
Sbjct: 61 AQKVAEDTAKNIKVLTSSTAPLIRKRQVMKLALGDYRAKMQQEEQKL 107
>AE014134-625|AAF51094.1| 676|Drosophila melanogaster CG3213-PA
protein.
Length = 676
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -1
Query: 725 KPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNN 546
K CK + VD L Q Q+EL +LE L ++ +QL+ T L L+
Sbjct: 528 KACKTQMEQQPNVDVRPQLAQCQMELTQARNELEELLRQRDLFCEQLKSTQDDLDTLRTE 587
Query: 545 NQPII 531
+ II
Sbjct: 588 SAKII 592
>BT028796-1|ABI34177.1| 516|Drosophila melanogaster IP16073p
protein.
Length = 516
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 56 FFCTVFVCFFSIVILRVSLYVVIGYNRL-CVTNFVIFFCNGRNISIFYLI*SQIEIKT 226
FFC VF+ F+I++ + Y G + C+ ++ FF G F++ E+ T
Sbjct: 375 FFCAVFLLLFAIMLFFIESYSWFGMGCIGCIFLYIFFFQFGLGPMPFFIGAELFELAT 432
>AE013599-120|AAF57300.2| 516|Drosophila melanogaster CG7882-PA,
isoform A protein.
Length = 516
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 56 FFCTVFVCFFSIVILRVSLYVVIGYNRL-CVTNFVIFFCNGRNISIFYLI*SQIEIKT 226
FFC VF+ F+I++ + Y G + C+ ++ FF G F++ E+ T
Sbjct: 375 FFCAVFLLLFAIMLFFIESYSWFGMGCIGCIFLYIFFFQFGLGPMPFFIGAELFELAT 432
>AE013599-119|AAM68334.1| 586|Drosophila melanogaster CG7882-PB,
isoform B protein.
Length = 586
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 56 FFCTVFVCFFSIVILRVSLYVVIGYNRL-CVTNFVIFFCNGRNISIFYLI*SQIEIKT 226
FFC VF+ F+I++ + Y G + C+ ++ FF G F++ E+ T
Sbjct: 445 FFCAVFLLLFAIMLFFIESYSWFGMGCIGCIFLYIFFFQFGLGPMPFFIGAELFELAT 502
>AY058630-1|AAL13859.1| 487|Drosophila melanogaster LD32783p
protein.
Length = 487
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/89 (21%), Positives = 41/89 (46%)
Frame = -1
Query: 725 KPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNN 546
+P + +H +PE+S R F+ L C +R N K+ +E + + + +
Sbjct: 109 RPYDLKRHLMVHNNPEKSHRTFKCSL--CTYSSDRKANLKRHHELRHSGIEEAIQTAEEL 166
Query: 545 NQPIIRKRQLMRTHFGDYRAKMASEEKKL 459
Q ++ ++Q+++ H Y+ + K L
Sbjct: 167 RQEMLLEKQMLKEHKLKYQITEKQDLKNL 195
>AF025540-1|AAC14018.1| 487|Drosophila melanogaster zinc finger
protein HER protein.
Length = 487
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/89 (21%), Positives = 41/89 (46%)
Frame = -1
Query: 725 KPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNN 546
+P + +H +PE+S R F+ L C +R N K+ +E + + + +
Sbjct: 109 RPYDLKRHLMVHNNPEKSHRTFKCSL--CTYSSDRKANLKRHHELRHSGIEEAIQTAEEL 166
Query: 545 NQPIIRKRQLMRTHFGDYRAKMASEEKKL 459
Q ++ ++Q+++ H Y+ + K L
Sbjct: 167 RQEMLLEKQMLKEHKLKYQITEKQDLKNL 195
>AE014134-2742|AAF53549.1| 487|Drosophila melanogaster CG4694-PA
protein.
Length = 487
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/89 (21%), Positives = 41/89 (46%)
Frame = -1
Query: 725 KPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNN 546
+P + +H +PE+S R F+ L C +R N K+ +E + + + +
Sbjct: 109 RPYDLKRHLMVHNNPEKSHRTFKCSL--CTYSSDRKANLKRHHELRHSGIEEAIQTAEEL 166
Query: 545 NQPIIRKRQLMRTHFGDYRAKMASEEKKL 459
Q ++ ++Q+++ H Y+ + K L
Sbjct: 167 RQEMLLEKQMLKEHKLKYQITEKQDLKNL 195
>BT011041-1|AAR31112.1| 517|Drosophila melanogaster SD19826p
protein.
Length = 517
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 68 VFVCFFSIVILRVS-LYVVIGYNRLCVTNFVI 160
VF+CF SIV+L VS +YV+I Y + + F++
Sbjct: 386 VFLCFLSIVMLVVSDVYVLITYASIVESFFIM 417
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -1
Query: 632 QLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSK 453
QL+ TLN + NE LQ+T +++ L+ N ++ + D ++K++ E KL++
Sbjct: 666 QLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQRNE-------DLQSKLSLTEVKLTQ 718
Query: 452 NVLRITLI 429
+I +
Sbjct: 719 ATQQIDAV 726
>AY129439-1|AAM76181.1| 751|Drosophila melanogaster LD08185p
protein.
Length = 751
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -1
Query: 632 QLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSK 453
QL+ TLN + NE LQ+T +++ L+ N ++ + D ++K++ E KL++
Sbjct: 293 QLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQRNE-------DLQSKLSLTEVKLTQ 345
Query: 452 NVLRITLI 429
+I +
Sbjct: 346 ATQQIDAV 353
>AY119103-1|AAM50963.1| 853|Drosophila melanogaster RE06730p
protein.
Length = 853
Score = 29.5 bits (63), Expect = 5.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 575 WKVLTVLKNNNQPIIRKRQLMRTH 504
WK T++ NN I+R ++L++ H
Sbjct: 157 WKTFTIIYENNDGIVRLQELLKAH 180
>AY060663-1|AAL28211.1| 517|Drosophila melanogaster GH08870p
protein.
Length = 517
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 68 VFVCFFSIVILRVS-LYVVIGYNRLCVTNFVI 160
VF+CF SIV+L VS +YV+I Y + + F++
Sbjct: 386 VFLCFLSIVMLVVSDVYVLITYASIVESFFIM 417
>AE014297-4069|AAF56667.1| 517|Drosophila melanogaster CG6070-PA
protein.
Length = 517
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 68 VFVCFFSIVILRVS-LYVVIGYNRLCVTNFVI 160
VF+CF SIV+L VS +YV+I Y + + F++
Sbjct: 386 VFLCFLSIVMLVVSDVYVLITYASIVESFFIM 417
>AE014297-2882|AAF55818.1| 853|Drosophila melanogaster CG3822-PA
protein.
Length = 853
Score = 29.5 bits (63), Expect = 5.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 575 WKVLTVLKNNNQPIIRKRQLMRTH 504
WK T++ NN I+R ++L++ H
Sbjct: 157 WKTFTIIYENNDGIVRLQELLKAH 180
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -1
Query: 632 QLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSK 453
QL+ TLN + NE LQ+T +++ L+ N ++ + D ++K++ E KL++
Sbjct: 629 QLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQRNE-------DLQSKLSLTEVKLTQ 681
Query: 452 NVLRITLI 429
+I +
Sbjct: 682 ATQQIDAV 689
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -1
Query: 632 QLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSK 453
QL+ TLN + NE LQ+T +++ L+ N ++ + D ++K++ E KL++
Sbjct: 666 QLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQRNE-------DLQSKLSLTEVKLTQ 718
Query: 452 NVLRITLI 429
+I +
Sbjct: 719 ATQQIDAV 726
>AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-PB,
isoform B protein.
Length = 1728
Score = 28.7 bits (61), Expect = 9.6
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = -1
Query: 713 IDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPI 534
+ K + V ++ L+ F E+ +Q R ++ +K+ + W L + Q
Sbjct: 49 VAKFRRKCVRMQQRLQDFAQEIS--DRQTARQAKRQQKVQKKTHDRWLQLEPTSHEEQQP 106
Query: 533 IRKRQLMRTHFGDYRAKMASEE 468
IRKR+++ GD A A+ E
Sbjct: 107 IRKRRMVSESDGDSTAAAAAAE 128
>AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-PA,
isoform A protein.
Length = 1918
Score = 28.7 bits (61), Expect = 9.6
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = -1
Query: 713 IDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPI 534
+ K + V ++ L+ F E+ +Q R ++ +K+ + W L + Q
Sbjct: 239 VAKFRRKCVRMQQRLQDFAQEIS--DRQTARQAKRQQKVQKKTHDRWLQLEPTSHEEQQP 296
Query: 533 IRKRQLMRTHFGDYRAKMASEE 468
IRKR+++ GD A A+ E
Sbjct: 297 IRKRRMVSESDGDSTAAAAAAE 318
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,682,026
Number of Sequences: 53049
Number of extensions: 565646
Number of successful extensions: 2020
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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