Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17i04
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 2.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 2.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 3.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 5.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.5
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 22 7.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 7.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 7.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 9.9
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 21 9.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 9.9
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.4 bits (48), Expect = 2.4
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 608 KKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKNV 447
KK +KQ + KV+ L N + YR K E KKL NV
Sbjct: 77 KKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEEEAKKLGINV 130
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.4 bits (48), Expect = 2.4
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 608 KKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKNV 447
KK +KQ + KV+ L N + YR K E KKL NV
Sbjct: 77 KKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEEEAKKLGINV 130
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 617 KFALTVGYTNITRAETVVTIPRGLHLRTHV 706
K L+V +NIT + T P G + TH+
Sbjct: 385 KMTLSVNESNITWPGRLQTKPEGFMIPTHL 414
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 734 SLQKPCKIDKHESEGVD 684
+LQ+P +DK+ +EG++
Sbjct: 359 TLQRPQDVDKYPAEGLE 375
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 563 LRLSMFLAIVFRFLSFHLKFALTVGYTN 646
L+ + + + FR+L LKF+ Y N
Sbjct: 58 LQFDVHMMLQFRYLDARLKFSNIAPYLN 85
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 206 SQIEIKTERLISCSLKYRFPKK 271
+ I +K+ +LI C KY+ K+
Sbjct: 110 ADIHLKSSKLIKCFAKYKTLKE 131
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 650 LCWCIQQLERTLNEKK-GNEK 591
LC +Q LER +EK GN K
Sbjct: 132 LCDLVQGLERLFDEKNAGNNK 152
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -2
Query: 190 NGNISTVTEENNKIGNTESVIADDNIQGNSKDHNTEEAN 74
N N S NN N + A+DN GN +N +
Sbjct: 234 NTNASNNNNNNNNNNNNNNG-ANDNGNGNGASNNNNNGD 271
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/49 (22%), Positives = 23/49 (46%)
Frame = -2
Query: 226 RFNFDLTSDQIENGNISTVTEENNKIGNTESVIADDNIQGNSKDHNTEE 80
R N + +D +NGN + N N +DN + +++ H++ +
Sbjct: 494 RQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQNNQNDNNRNDNQVHHSSK 542
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 181 ISTVTEEN-NKIGNTESVIADDN 116
I V+EE+ NK+ ESV A++N
Sbjct: 15 ILAVSEESINKLRKIESVCAEEN 37
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 710 DKHESEGVDPEESLRQFQLELCWCIQQLERTLNEK 606
+K S VD L +F + + W I ++ NEK
Sbjct: 188 EKSGSNVVDVGVDLSEFYMSVEWDILEVPAVRNEK 222
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 710 DKHESEGVDPEESLRQFQLELCWCIQQLERTLNEK 606
+K S VD L +F + + W I ++ NEK
Sbjct: 188 EKSGSNVVDVGVDLSEFYMSVEWDILEVPAVRNEK 222
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 387 NWATTIFHGSYPGIYQSDSQYIFRQFF 467
NW + +F+G+ ++ Q+ F QF+
Sbjct: 170 NWLS-VFNGTGWTFHEGRKQFYFHQFY 195
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,256
Number of Sequences: 438
Number of extensions: 3802
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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