Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17h22
         (824 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030553-1|AAH30553.1|  470|Homo sapiens sphingosine kinase 1 pr...    33   1.7  
BC014439-1|AAH14439.1|  470|Homo sapiens sphingosine kinase 1 pr...    33   1.7  
BC009419-1|AAH09419.1|  398|Homo sapiens sphingosine kinase 1 pr...    33   1.7  
BC008040-1|AAH08040.1|  384|Homo sapiens SPHK1 protein protein.        33   1.7  
AY278525-1|AAP35060.1|  384|Homo sapiens sphingosine kinase 1 pr...    33   1.7  
AK023393-1|BAB14558.1|  384|Homo sapiens protein ( Homo sapiens ...    33   1.7  
AK022402-1|BAB14028.1|  384|Homo sapiens protein ( Homo sapiens ...    33   1.7  
AF266756-1|AAF73470.1|  384|Homo sapiens sphingosine kinase prot...    33   1.7  
AF238083-1|AAF73423.1|  384|Homo sapiens sphingosine kinase-1 pr...    33   1.7  
AF200328-1|AAG01980.1|  384|Homo sapiens sphingosine kinase prot...    33   1.7  
AJ245504-1|CAB92131.1|  381|Homo sapiens sphingosine kinase prot...    32   2.9  
AL513218-6|CAI12286.1| 1366|Homo sapiens zinc finger, FYVE domai...    31   6.7  
AF130419-1|AAD31694.1| 1210|Homo sapiens serine protease-like pr...    31   6.7  

>BC030553-1|AAH30553.1|  470|Homo sapiens sphingosine kinase 1
           protein.
          Length = 470

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 175 NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 216


>BC014439-1|AAH14439.1|  470|Homo sapiens sphingosine kinase 1
           protein.
          Length = 470

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 175 NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 216


>BC009419-1|AAH09419.1|  398|Homo sapiens sphingosine kinase 1
           protein.
          Length = 398

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 103 NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 144


>BC008040-1|AAH08040.1|  384|Homo sapiens SPHK1 protein protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AY278525-1|AAP35060.1|  384|Homo sapiens sphingosine kinase 1
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AK023393-1|BAB14558.1|  384|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13331 fis, clone OVARC1001809, moderately
           similar to Mus musculus sphingosine kinase (SPHK1a)
           mRNA. ).
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AK022402-1|BAB14028.1|  384|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12340 fis, clone MAMMA1002268, moderately
           similar to Mus musculus sphingosine kinase (SPHK1a)
           mRNA. ).
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AF266756-1|AAF73470.1|  384|Homo sapiens sphingosine kinase
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AF238083-1|AAF73423.1|  384|Homo sapiens sphingosine kinase-1
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AF200328-1|AAG01980.1|  384|Homo sapiens sphingosine kinase
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 89  NGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVT 130


>AJ245504-1|CAB92131.1|  381|Homo sapiens sphingosine kinase
           protein.
          Length = 381

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 518 NGLWERASWAIFEATPLCPIPSGRGTTCPRGF-HFLGCSSVS 640
           NGL ER  W      PLC +P+G G        H+ G   V+
Sbjct: 86  NGLMERPDWETAIQKPLCSLPAGSGKPLAASLNHYAGYEQVT 127


>AL513218-6|CAI12286.1| 1366|Homo sapiens zinc finger, FYVE domain
           containing 9 protein.
          Length = 1366

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +2

Query: 146 CGKRRLRYVFCYAATPLRCSATMMSTPHSNLCDVAYASLLSIRPPVETDNVSFS 307
           CGK     VFC +   L+C    M    + +C + ++ L+++  P E   V F+
Sbjct: 724 CGK-----VFCASCCSLKCKLLYMDRKEARVCVICHSVLMNVAQPREQRRVWFA 772


>AF130419-1|AAD31694.1| 1210|Homo sapiens serine protease-like
           protein isoform protein.
          Length = 1210

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +2

Query: 146 CGKRRLRYVFCYAATPLRCSATMMSTPHSNLCDVAYASLLSIRPPVETDNVSFS 307
           CGK     VFC +   L+C    M    + +C + ++ L+++  P E   V F+
Sbjct: 724 CGK-----VFCASCCSLKCKLLYMDRKEARVCVICHSVLMNVAQPREQRRVWFA 772


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,616,514
Number of Sequences: 237096
Number of extensions: 2793839
Number of successful extensions: 5905
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5905
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)