Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17h03
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 347 9e-96
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 347 9e-96
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 346 1e-95
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 345 3e-95
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 339 1e-93
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 339 1e-93
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 338 2e-93
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 332 2e-91
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 330 1e-90
12_02_1282 + 27528159-27529148,27529549-27529614 274 7e-74
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 124 9e-29
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 122 3e-28
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 112 4e-25
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 104 8e-23
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 103 2e-22
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 84 1e-16
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 83 3e-16
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 78 7e-15
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 33 0.37
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 32 0.64
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 31 0.85
08_02_0238 + 14665813-14668798,14669088-14669125 29 4.5
08_01_0311 - 2753062-2753232,2753340-2753381,2754490-2754667,275... 29 4.5
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 4.5
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 6.0
11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,406... 28 7.9
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 28 7.9
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 347 bits (852), Expect = 9e-96
Identities = 162/182 (89%), Positives = 171/182 (93%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKL Y+ALD+EQE+ TA SSSS+EKSYELPDGQVITIG E
Sbjct: 193 TERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAE 252
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 253 RFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 312
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRK
Sbjct: 313 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 372
Query: 288 CF 283
CF
Sbjct: 373 CF 374
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 347 bits (852), Expect = 9e-96
Identities = 160/182 (87%), Positives = 172/182 (94%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRD+KEKL Y+ALD++QEM TA +SSS+EKSYELPDGQVITIG E
Sbjct: 196 TERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAE 255
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 256 RFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRK
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRK 375
Query: 288 CF 283
CF
Sbjct: 376 CF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 346 bits (850), Expect = 1e-95
Identities = 159/182 (87%), Positives = 172/182 (94%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTT+AEREIVRDIKEKL YVALD+EQE+ TA +SSS+EKSYELPDGQVITIG+E
Sbjct: 196 TERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSIEKSYELPDGQVITIGSE 255
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 256 RFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRM 315
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRK
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRK 375
Query: 288 CF 283
CF
Sbjct: 376 CF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 345 bits (848), Expect = 3e-95
Identities = 160/182 (87%), Positives = 171/182 (93%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTT+AEREIVRDIKEKL YVALD+EQE+ TA +SSS+EKSYELPDGQVITIG E
Sbjct: 196 TERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSVEKSYELPDGQVITIGAE 255
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 256 RFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRK
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRK 375
Query: 288 CF 283
CF
Sbjct: 376 CF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 339 bits (834), Expect = 1e-93
Identities = 157/182 (86%), Positives = 171/182 (93%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTT+AEREIVRDIKEKL YVALD+EQE+ TA SSSS+EKSYELPDGQVITIG E
Sbjct: 196 TERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAE 255
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE +FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM
Sbjct: 256 RFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRK
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRK 375
Query: 288 CF 283
CF
Sbjct: 376 CF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 339 bits (834), Expect = 1e-93
Identities = 158/182 (86%), Positives = 167/182 (91%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKL YVALD+EQE+ TA SSSS+EKSYELPDGQVITIG E
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVITIGAE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPSF+GMEA GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGI DRM
Sbjct: 255 RFRCPEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH K
Sbjct: 315 SKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 338 bits (832), Expect = 2e-93
Identities = 160/185 (86%), Positives = 171/185 (92%), Gaps = 3/185 (1%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM---ATAASSSSLEKSYELPDGQVITI 658
TERGYSFTTTAEREIVRDIKEKL YVALD+EQE+ A A +SSS+EKSYELPDGQVITI
Sbjct: 196 TERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDGQVITI 255
Query: 657 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 478
G ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIA
Sbjct: 256 GAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIA 315
Query: 477 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 298
DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IV
Sbjct: 316 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIV 375
Query: 297 HRKCF 283
HRKCF
Sbjct: 376 HRKCF 380
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/182 (84%), Positives = 168/182 (92%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYS TT+AEREIVRDIKEKL YVALD+EQE+ T+ SSSS+EKSYE+PDGQVITIG+E
Sbjct: 195 TERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETSRSSSSVEKSYEMPDGQVITIGSE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPS +GME+ GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM
Sbjct: 255 RFRCPEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH K
Sbjct: 315 SKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 330 bits (810), Expect = 1e-90
Identities = 161/196 (82%), Positives = 171/196 (87%), Gaps = 14/196 (7%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKL YVALD+EQE+ A SSSS+EKSYELPDGQVITIG E
Sbjct: 196 TERGYSFTTTAEREIVRDIKEKLAYVALDYEQELEAAKSSSSVEKSYELPDGQVITIGAE 255
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM
Sbjct: 256 RFRCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISK 331
KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ QMWISK
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISK 375
Query: 330 QEYDESGPSIVHRKCF 283
EYDESGP+IVHRKCF
Sbjct: 376 GEYDESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 274 bits (671), Expect = 7e-74
Identities = 138/182 (75%), Positives = 147/182 (80%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRD+KEKL Y+ALDF+QEMATAA+ SS+EKSYELPDGQVITIG E
Sbjct: 196 TERGYSFTTTAEREIVRDVKEKLSYIALDFDQEMATAATGSSVEKSYELPDGQVITIGAE 255
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 256 RFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
KEITALAPS+MKIK MWI+K EYDESGPSIVHRK
Sbjct: 316 SKEITALAPSSMKIK--------------------------MWIAKAEYDESGPSIVHRK 349
Query: 288 CF 283
CF
Sbjct: 350 CF 351
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 124 bits (299), Expect = 9e-29
Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 14/177 (7%)
Frame = -1
Query: 813 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 634
S+ R I DIKE +C V E+A A ++ SYELPDGQ I +G +RF+ P
Sbjct: 296 SYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIP 352
Query: 633 EALFQPSFL-----------GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 487
+ LF PS M G+ +S+ +CDVDIRK+L ++ +LSGG++
Sbjct: 353 DILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSIL 412
Query: 486 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 325
+ +R++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 413 QLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 122 bits (295), Expect = 3e-28
Identities = 68/159 (42%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Frame = -1
Query: 738 EQEMATAASSSSLE-KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 562
E +MA A SS + + LPDGQVITI ER+ EALFQP LG+E GI S+
Sbjct: 241 EDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHILGLEDYGIVHQLVTSV 300
Query: 561 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RK 400
+ + L NT+L GGT G DR Q+E L+ S + ++ PPE +
Sbjct: 301 SNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLAR 359
Query: 399 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 283
YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 360 YSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 112 bits (269), Expect = 4e-25
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 40/196 (20%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVAL---------------DFEQEMATAASSSSLEK 694
+ RGY+ +A+ E VR+IKEKLCY++L D+++E ++ L K
Sbjct: 195 SRRGYAMNKSADFETVREIKEKLCYLSLLSHFIELKRENMYSYDYKREYQLGLETTILVK 254
Query: 693 SYELPDGQVITIGNERFRCPEALFQP--------------SFLGMEACGIHETTYNSIMK 556
SY LPDG+VI +G ERF+ PEALF P + +E G+ + + I +
Sbjct: 255 SYTLPDGRVIKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQE 314
Query: 555 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPP 409
D+D R LY + VLSGG+TMYPG+ R++KE+ L + ++++I PP
Sbjct: 315 MDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPP 374
Query: 408 ERKYSVWIGGSILASL 361
RK+ V++GG++LA +
Sbjct: 375 RRKHMVYLGGAVLAGI 390
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 104 bits (250), Expect = 8e-23
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Frame = -1
Query: 801 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE------LPDGQVITIGNERFR 640
T ++ V+D+ E Y +L E SS S +E L + + + NERF
Sbjct: 251 TYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELSQNEFV-LTNERFL 309
Query: 639 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 460
PE LF P LGM G+ E +I C ++ L+ +L+GG+T++P +R++KE
Sbjct: 310 VPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKE 369
Query: 459 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 283
+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 370 LRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
Score = 35.1 bits (77), Expect = 0.069
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -1
Query: 813 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS---LEKSYELPDG 673
S E ++ D KEKLC+V+LD ++ A SS+ SY LPDG
Sbjct: 200 SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 103 bits (247), Expect = 2e-22
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Frame = -1
Query: 783 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 604
VR IKEKLCYVA D+E E + S E+ T+ ERF+ E LFQP G
Sbjct: 315 VRTIKEKLCYVAADYEAE-----KRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGG 369
Query: 603 MEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM 433
+ A G+H+ + C +V + Y VLSGG++ PG+++R++KE+ L P+ +
Sbjct: 370 VRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAHI 429
Query: 432 K--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIVH 295
I++I PP S W G +++++STF + W I K+++ + +GPS V+
Sbjct: 430 SEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 83.8 bits (198), Expect = 1e-16
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Frame = -1
Query: 825 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS--------SSLEKSYELPDGQ 670
ERG +I R +KE CY + D +E S+++ +P
Sbjct: 234 ERGELIAPEDSLDIARRVKEMYCYTSSDIVKEFKKHDKKPDKYIKHWSAIKPKTGVP--Y 291
Query: 669 VITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTM 493
I IG ERF PE F P + + + E + + +D R+DLY N VLSGG+TM
Sbjct: 292 TIDIGYERFLGPEIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTM 351
Query: 492 YPGIADRMQKEITALAP--------------STMKIKIIAPPERKYSVWIGGSILASLST 355
+ R+Q +I + +++ ++A P + Y+ W GGS+ AS
Sbjct: 352 FKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPE 411
Query: 354 FQQMWISKQEYDESGPSI 301
F + +K+EY+E G SI
Sbjct: 412 FYESCHTKEEYEEHGASI 429
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = -1
Query: 666 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC--DVDIRKDLYANTVLSGGTTM 493
I+IG ERFRCPE LFQP +G++ GI E S+ + D +++ L + +++GG ++
Sbjct: 575 ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSL 634
Query: 492 YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 313
PG+ R++ I P +K++ + W G + A+ S F + S +Y E
Sbjct: 635 IPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREH 694
Query: 312 GPSIVHRK 289
G ++ HRK
Sbjct: 695 GENLFHRK 702
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 78.2 bits (184), Expect = 7e-15
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Frame = -1
Query: 825 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY----ELPDGQVIT- 661
ERG ++ R +KE CY D +E + + + G T
Sbjct: 265 ERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTC 324
Query: 660 -IGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 487
IG ERF PE F P + +H I +D R+ LY N VLSGG+TM+
Sbjct: 325 DIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFK 384
Query: 486 GIADRMQKEITALAPS----------------TMKIKIIAPPERKYSVWIGGSILASLST 355
R+Q+++ + + +++ +++ P ++Y+VW GGS+LAS +
Sbjct: 385 DFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAE 444
Query: 354 FQQMWISKQEYDESGPSI 301
F + +K EY+E G SI
Sbjct: 445 FYEACHTKAEYEEYGASI 462
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -1
Query: 588 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 409
I E Y I++ ++ ++ T +G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLREYLEGTESAG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 408 ERKYSVWIGGSILAS 364
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -1
Query: 738 EQEMATAASSSSLEKSY-ELPDGQ-VITIGNERFRCPEAL 625
E E++ A +K Y +L G+ V+++GNE+FRCP L
Sbjct: 7 ESELSDADIDDYADKCYMDLKSGKPVVSLGNEKFRCPFCL 46
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1
Query: 588 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 409
I E Y I++ + ++ T +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 408 ERKYS 394
ER+++
Sbjct: 379 ERQHN 383
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 379 STDPYGVLPLWRSNDLNLHCRW-GESC 456
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>08_01_0311 -
2753062-2753232,2753340-2753381,2754490-2754667,
2755021-2755118,2755964-2756098,2756280-2756444,
2756529-2756693,2757082-2757299,2758508-2758811
Length = 491
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 679 GKFVRLLEGAAGCSSGHLLLEVESDVAELLLDVTNDFPLGGGS 807
G+FV + E A G LL E+ D+ L N+ G GS
Sbjct: 414 GRFVTIEERAVADEDGQLLQEMHMDLCSLQATAKNEGSAGSGS 456
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -2
Query: 401 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 222
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 221 N 219
N
Sbjct: 272 N 272
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 248 RAAGGSGARCV*KHFLCTMEGPDS 319
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>11_01_0519 +
4066776-4066892,4067042-4067099,4067322-4067608,
4067706-4067822,4067898-4067958,4068042-4068133,
4068547-4068632,4068926-4068975,4069077-4069117,
4069222-4069392,4069875-4069942,4070088-4070148,
4070471-4070757,4072008-4072172,4072759-4072760,
4072829-4073139,4073600-4073787,4075231-4075482,
4076035-4076114,4076199-4076399,4076959-4077014,
4077137-4077328
Length = 980
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 655
T+ G F + E VR+ C D + + S SL+ +YE D + T+G
Sbjct: 402 TQMGSKFKKSLVSESVRESLHSWCKRVKDKNRHNLASRSVCSLDTTYEETDHETATVG 459
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 248 RAAGGSGARCV*KHFLCTM----EGPDSSYSCFEIHICWK 355
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,094,704
Number of Sequences: 37544
Number of extensions: 526615
Number of successful extensions: 1635
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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