Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17h03
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 377 e-105
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 377 e-105
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 377 e-105
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 377 e-105
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 377 e-105
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 377 e-105
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 376 e-104
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 376 e-104
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 376 e-104
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 370 e-103
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 355 2e-98
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 178 5e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 171 5e-43
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 111 8e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 1e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 81 1e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 81 1e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.76
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.76
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.76
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 177/182 (97%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 177/182 (97%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 177/182 (97%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 377 bits (927), Expect = e-105
Identities = 177/182 (97%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 151 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 210
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 211 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 270
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 271 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 330
Query: 288 CF 283
CF
Sbjct: 331 CF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 377 bits (927), Expect = e-105
Identities = 177/182 (97%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 181 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 240
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 241 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 300
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 301 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
Query: 288 CF 283
CF
Sbjct: 361 CF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 377 bits (927), Expect = e-105
Identities = 177/182 (97%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 376 bits (925), Expect = e-104
Identities = 176/182 (96%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 376 bits (925), Expect = e-104
Identities = 176/182 (96%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 376 bits (925), Expect = e-104
Identities = 176/182 (96%), Positives = 181/182 (99%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 288 CF 283
CF
Sbjct: 375 CF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 370 bits (910), Expect = e-103
Identities = 175/182 (96%), Positives = 180/182 (98%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 255 RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 288 CF 283
CF
Sbjct: 374 CF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 355 bits (874), Expect = 2e-98
Identities = 167/182 (91%), Positives = 173/182 (95%)
Frame = -1
Query: 828 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 649
TERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNE
Sbjct: 194 TERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNE 253
Query: 648 RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 469
RFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRM
Sbjct: 254 RFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRM 313
Query: 468 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 289
QKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK
Sbjct: 314 QKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 288 CF 283
CF
Sbjct: 374 CF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 178 bits (433), Expect = 5e-45
Identities = 86/179 (48%), Positives = 117/179 (65%)
Frame = -1
Query: 819 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFR 640
GY F + E EIVR++KE CY+ALD T ++S++ SY LPD I I N FR
Sbjct: 201 GYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFR 255
Query: 639 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 460
PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E
Sbjct: 256 APEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
Query: 459 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 283
+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 316 MRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 171 bits (416), Expect = 5e-43
Identities = 85/185 (45%), Positives = 116/185 (62%), Gaps = 13/185 (7%)
Frame = -1
Query: 825 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 646
+RGY+F +A+ E VR +KEKLCY+A D EQE A ++ L + Y LPDG+VI +G ER
Sbjct: 199 QRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGER 258
Query: 645 FRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 466
F PE LFQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R++
Sbjct: 259 FEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLE 318
Query: 465 KEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQE 325
KE+ L A KI+I APP RK+ V++GG++LA+L Q W+SK+E
Sbjct: 319 KELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKE 378
Query: 324 YDESG 310
Y+E G
Sbjct: 379 YEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 1e-27
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -1
Query: 690 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 526
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 525 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 355
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 354 FQQMWISKQEYDESGPSIVHRKC 286
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 111 bits (266), Expect = 8e-25
Identities = 55/167 (32%), Positives = 98/167 (58%), Gaps = 3/167 (1%)
Frame = -1
Query: 816 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNER 646
Y+F + E+ I+R E+ YV D+++E + + SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 645 FRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 466
F C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA++++
Sbjct: 433 FLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLE 492
Query: 465 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 325
+E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 493 QELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 100 bits (240), Expect = 1e-21
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 23/198 (11%)
Frame = -1
Query: 825 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA-ASSSSLEKSYELPDGQV-----I 664
+R ++ E+ + IKEK CYV D +E ++ ++Y+ + +
Sbjct: 217 DREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNV 276
Query: 663 TIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 487
+G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 277 DVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFK 336
Query: 486 GIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLST 355
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 337 DFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSE 396
Query: 354 FQQMWISKQEYDESGPSI 301
F Q+ +K EY E GPSI
Sbjct: 397 FYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 81.0 bits (191), Expect = 1e-15
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Frame = -1
Query: 795 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 667
E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 666 -----ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 502
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 501 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 331
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 330 QEYDESGPSIVHRKCF*T 277
+++DE G S+ F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 81.0 bits (191), Expect = 1e-15
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Frame = -1
Query: 795 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 667
E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 666 -----ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 502
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 501 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 331
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 330 QEYDESGPSIVHRKCF*T 277
+++DE G S+ F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 564 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 400
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 399 ----YSVWIGGSILASL-STFQQMWISKQEY 322
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 388 PYGVLPLWRSNDLNLHCRWGESCD 459
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 388 PYGVLPLWRSNDLNLHCRWGESCD 459
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 388 PYGVLPLWRSNDLNLHCRWGESCD 459
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,155,032
Number of Sequences: 27780
Number of extensions: 384645
Number of successful extensions: 1211
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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