Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17h01
(296 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 0.80
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 1.8
AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled ... 23 2.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 2.4
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 23 3.2
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 22 5.6
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 22 5.6
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 21 7.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 21 7.4
AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A... 21 7.4
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 21 9.8
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 21 9.8
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 21 9.8
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 21 9.8
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 21 9.8
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 21 9.8
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 24.6 bits (51), Expect = 0.80
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -3
Query: 99 VSVWEDNWEDDVIQDDFNQQLR 34
+ W++ W+ D +Q D ++ R
Sbjct: 934 IDCWQEEWDADALQQDASRHTR 955
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 61 DDVVFPVVFPNRYIFIISVFCTPIFRGKFFELVILF*QTKVYFLFVSHYTVMI 219
DD ++ +V+PNR ++ I R +F E V + +Y + YTV++
Sbjct: 663 DDRMWKIVYPNRLESMLEYSDVQIDRTRFEEAVPVDLNPTIY--YGPDYTVIL 713
>AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled
receptor 4 protein.
Length = 426
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 293 FYVTVVL*LASYLFCYIK*YFLISIIIT 210
F+ T L A LFC I YFL +II+
Sbjct: 233 FFATPGLETAYNLFCVIAMYFLPLMIIS 260
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 271 DLHLIYSATLSDISL 227
+L L+YSATL D+ L
Sbjct: 235 ELFLLYSATLKDLKL 249
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -3
Query: 126 GTEDADDEDVSVWEDNWEDDVIQDDFNQQL 37
GT + D+ + N+ DD + +FN+ +
Sbjct: 594 GTAEGMKFDLFLMISNFADDTVNQEFNEDI 623
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 21.8 bits (44), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = -3
Query: 126 GTEDADDEDVSVWED-NWE-----DDVIQDDFNQQ 40
GT+D DDED +E ++E DV D++Q+
Sbjct: 1059 GTDDIDDEDTYDYEQPDYELPPEHSDVTTPDYDQR 1093
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 280 LCCDLHLIYSATLSDISLFQ*SSQ 209
+CCD + +A DIS+ SSQ
Sbjct: 672 ICCDQDDLVNAYADDISVVTTSSQ 695
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = -3
Query: 126 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 1
G E D++ +D +DDV DD + ++ + + S
Sbjct: 1723 GDEGGSDKEDDDGDDGEDDDVENDDPELSSQLMVDSMNENAS 1764
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 96 IHLHHQRLLYPNFPREIL 149
+ LH + + P+FPR+ L
Sbjct: 2153 VFLHEELMKLPSFPRKAL 2170
>AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A2
protein.
Length = 496
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 141 EILRTRHPLLANQGLLSVCQPLH 209
+I TR P LA +S C LH
Sbjct: 428 DIYSTREPQLAFHQRISFCLDLH 450
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 123 TEDADDEDVSVWEDN 79
TED +DE++SV N
Sbjct: 259 TEDDEDENISVTRTN 273
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 126 GTEDADDEDVSVWEDNWEDDVIQDD 52
G ED +DE+ D+ E+D +D
Sbjct: 480 GEEDEEDEEDEYEGDDTEEDEEDED 504
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 114 ADDEDVSVWEDNWEDDVIQD 55
A E +VW W D + +D
Sbjct: 26 AQSEGAAVWAPTWADTLKKD 45
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 259 IYSATLSDISLFQ*SSQCN 203
+Y+ LSD ++F S CN
Sbjct: 352 VYAECLSDSAIFVQSRNCN 370
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = -3
Query: 141 PAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 22
P W ED +DE ++ + ++ N+Q LE
Sbjct: 1049 PKPQWDEEDLEDEQKAIGRRDTIHRILYQHKNKQDWSNLE 1088
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -3
Query: 90 WEDNWEDDVIQDDFNQQLR 34
W++ W+ D Q D ++ +R
Sbjct: 898 WQEEWDADASQADASRFVR 916
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,727
Number of Sequences: 2352
Number of extensions: 4451
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18688617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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