Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17g22
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1574 + 38337669-38338196 53 3e-07
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 51 8e-07
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498... 51 8e-07
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 48 1e-05
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 44 1e-04
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 41 9e-04
01_07_0292 + 42560302-42560668,42560818-42560910,42563746-425639... 41 9e-04
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 40 0.001
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 38 0.008
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 38 0.011
02_05_0546 + 29889861-29890182,29891057-29892798 36 0.024
08_02_0611 + 19317969-19318778 33 0.031
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 36 0.032
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 36 0.042
02_01_0173 + 1190846-1191134,1191235-1191557,1191645-1191958,119... 36 0.042
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 35 0.074
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 35 0.074
07_03_1228 - 25009736-25010965 34 0.098
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 33 0.23
07_03_1780 - 29465873-29466130,29466236-29466335,29466473-294665... 33 0.23
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 33 0.30
12_01_0395 - 3117315-3118117,3118354-3118478,3118558-3118770,311... 31 0.91
09_03_0065 + 12013715-12013720,12013899-12014612 31 0.91
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 31 0.91
03_02_0715 + 10621789-10623243,10624074-10625018 31 0.91
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 30 1.6
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 30 1.6
03_06_0322 + 33114988-33115130,33116972-33117024,33117432-331177... 30 1.6
09_05_0016 + 20089545-20089748,20090072-20090263,20090644-200908... 30 2.1
08_02_0704 + 20197529-20197601,20197720-20198062,20198194-201982... 30 2.1
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 30 2.1
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 30 2.1
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 29 2.8
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 29 2.8
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 2.8
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 29 3.7
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 29 3.7
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 29 3.7
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 29 3.7
03_02_0480 + 8785130-8785192,8785472-8785518,8786415-8786508,878... 25 4.6
07_01_0623 + 4638952-4639024,4640422-4640439,4641312-4641660,464... 29 4.9
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 29 4.9
02_03_0188 + 16173801-16173910,16174045-16174402 29 4.9
05_07_0086 + 27596517-27596777 28 6.4
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 28 6.4
07_01_0422 + 3220988-3221536 28 8.5
02_05_1162 - 34593101-34594624 28 8.5
02_02_0724 + 13349419-13349641,13349880-13349974,13350366-133506... 28 8.5
01_02_0080 + 10933064-10933945 28 8.5
>01_06_1574 + 38337669-38338196
Length = 175
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 321 CPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
CP C VC D+ ++ CD C++ YH CL PPL P+ WHC+ C
Sbjct: 69 CPSCLCRVCKVDRDDEQIILCDGCDEGYHLYCLIPPLTLVPEG---EWHCSSC 118
>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 321 CPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCDPTDVEE 142
CP C C Q D+ +V CD C++ YH C+ P N PK + W+C C E
Sbjct: 1138 CPSCLCRGCFQDKDDDQIVMCDGCDEGYHIYCMRPARNTIPKGK---WYCTFCKIRRAAE 1194
Query: 141 N-N*YQDLVL 115
+ Y+D VL
Sbjct: 1195 GMHKYEDSVL 1204
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = -3
Query: 336 PPAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
P LCP CD C D + CDEC+ YHF C++ LN + K+ WHC+ C
Sbjct: 958 PGRDLCP---CDGCGTKVDVEEGLICDECDTMYHFACVK-LLNPDIKQVPAIWHCSTC 1011
>01_05_0282 -
20347915-20348874,20348968-20349012,20349568-20349816,
20350393-20350581,20351051-20351155,20351165-20351488,
20351493-20351555
Length = 644
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 333 PAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
P CP C VCH D+ + CD C++ YH C+ P PK + W+C+ C
Sbjct: 538 PCWYCPSCLCRVCHSDRDDDLTILCDGCDEAYHLYCITPRRTSIPKGK---WYCSSC 591
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 312 THCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
T+C+ C + +++ C C +H +C+EPP+ P SW C C
Sbjct: 369 TNCNECGKVAKIDSILTCKRCMLAFHVSCIEPPV---PSTSTGSWCCKTC 415
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCDPTDVEENN*YQ 127
C VC D+ +++ CD+C+ YH CL PPL + P+ +W+C C T + Q
Sbjct: 1081 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEG---NWYCPSCQ-TKAHHDQGVQ 1136
Query: 126 DL 121
D+
Sbjct: 1137 DV 1138
>06_03_1511 -
30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCDPTD 151
C+ C+ ++ CD C+K +H CL PPL P +W+C++C +D
Sbjct: 259 CEQCNSGLHGEVMLLCDRCDKGWHLYCLSPPLESVPPG---NWYCSECMNSD 307
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = -3
Query: 342 DAPPAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
D LC + CDV GD+ RC C RYH +C+EP R W C C
Sbjct: 1411 DCNQKGLCAICSCDV----GDHIT-PRCMICQARYHSSCVEPLPASTQVTR--EWTCPFC 1463
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 273 NLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
NL+ CD C + YH CL PPL + P +W C C
Sbjct: 43 NLLCCDSCPRTYHLECLNPPLKRAPPG---NWQCPRC 76
>01_07_0292 +
42560302-42560668,42560818-42560910,42563746-42563969,
42564047-42564147,42564229-42564441,42564843-42565002
Length = 385
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 339 APPAALC-PMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
APP A T CDVC + L+ CD C++ H CL P + P W C C
Sbjct: 58 APPVARAYESTRCDVCGSGERDEELLLCDGCDRGRHTFCLRPIAARVPTG---PWFCPPC 114
Query: 162 DP 157
P
Sbjct: 115 AP 116
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 324 LCPMTH-CDVCHQPGDNTNLVRCDECNKRYHFTCLEP 217
+CP C+VC +PGD L+ C C+ YH C +P
Sbjct: 186 VCPSCRSCEVCRRPGDPNKLMFCKRCDGAYHCYCQQP 222
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 270 LVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCDPTDV 148
++ C CNK+YH +CL+ SW C C +V
Sbjct: 155 MLPCKLCNKKYHRSCLKNWGEHRDLFHWSSWVCPSCRSCEV 195
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCD 160
C VC + G +V CD C +H C+ PPL + P+ W C C+
Sbjct: 163 CRVCFRAGAAV-MVECDVCLGGFHLRCVRPPLRRVPEG---DWACPYCE 207
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCDPTDVEEN 139
C +C+ + T L+ C C++ H CL PP W C C + EEN
Sbjct: 642 CQICNTEEEKTLLLHCSGCSRHVHPGCLTPPWTGVLTD---DWSCYTCKKLEGEEN 694
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 306 CDVCHQP-GDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
C +C D +L+ CD C K H CL+ NK K WHC C
Sbjct: 209 CQICKVAIMDMESLLVCDACEKGAHLKCLQHYGNKGVPKA--EWHCPTC 255
>08_02_0611 + 19317969-19318778
Length = 269
Score = 33.5 bits (73), Expect(2) = 0.031
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPP 214
CD C +PG + RC CN H C PP
Sbjct: 33 CDGCQEPGGDGPRYRCAPCNFDLHTDCALPP 63
Score = 21.4 bits (43), Expect(2) = 0.031
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 192 RGYSWHCADCD 160
RG+ +HCAD D
Sbjct: 103 RGFVFHCADRD 113
>04_04_1694 - 35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 303 DVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
D C GD L+ CD C YH TCL + P+ SW+C +C
Sbjct: 1026 DTCGFCGDGGELLCCDNCPSTYHQTCLSD--QELPEG---SWYCHNC 1067
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 270 LVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHC 172
+++C +C YH TC++ + K+ W C
Sbjct: 1087 ILKCLQCGDSYHDTCIDQEMLPCGDKQSNIWFC 1119
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 303 DVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
D C GD +L+ CD C +H CL K WHC+ C
Sbjct: 733 DTCGICGDGGDLLCCDNCPSTFHLACL------GIKMPSGDWHCSSC 773
>02_01_0173 +
1190846-1191134,1191235-1191557,1191645-1191958,
1192302-1192461
Length = 361
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
C+ C L+ CD C++ H CL P L P+ W C C
Sbjct: 35 CEACGSGESAAELLLCDGCDRGLHIFCLRPIL---PRVPAGDWFCPSC 79
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 34.7 bits (76), Expect = 0.074
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -3
Query: 303 DVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCD 160
D C GD L+ CD C YH CL P P Y + C CD
Sbjct: 1045 DTCGLCGDGGELICCDNCPASYHQDCL--PCQDIPDGSWYCYRCL-CD 1089
>03_05_1122 + 30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 34.7 bits (76), Expect = 0.074
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 303 DVCHQPGDNTNLVRCDECNKRYHFTCLE 220
D C GD NL+ CD C +H +CLE
Sbjct: 959 DTCGICGDGGNLICCDGCPSTFHMSCLE 986
>07_03_1228 - 25009736-25010965
Length = 409
Score = 34.3 bits (75), Expect = 0.098
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 309 HCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPK 196
+C VC +PGD T RC C H C + ++PK
Sbjct: 25 NCKVCTKPGDTT-CYRCKSCKFSIHVNCAGVSVQRDPK 61
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNK-RYHFTCLEPPLNKNPKKRGYSWHCADCD 160
CD+C G+ L C CN H C+ + + P+ W C +C+
Sbjct: 229 CDICGDVGEEERLAVCTRCNDGAEHIYCMRVMMEEVPEG---EWLCEECE 275
>07_03_1780 -
29465873-29466130,29466236-29466335,29466473-29466559,
29466682-29467000,29467097-29468567
Length = 744
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGY--SWHCADCDPTDVEE 142
C VCH G+ L+ CD C +H C+ L P+ + + CA C +D+++
Sbjct: 414 CSVCHDCGE---LLMCDRCPSMFHHACV--GLESTPQGDWFCPACTCAICGSSDLDD 465
>11_03_0135 -
10547460-10547558,10547926-10548086,10548183-10548306,
10548566-10548729,10549803-10549883,10549973-10550097,
10550200-10550430,10550566-10550588,10551055-10551539,
10551678-10552075,10552903-10552988,10553120-10553397,
10553494-10553714,10553927-10554018,10554148-10554213,
10555855-10556022
Length = 933
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNK-RYHFTCLEPPLNKNPKKRGYSWHCADC 163
CD+C G+ L C CN H C+ + + P+ W C +C
Sbjct: 84 CDICGDVGEEKKLAICSRCNDGAEHIYCMRVMMPEVPEG---DWFCEEC 129
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNK-RYHFTCLEPPLNKNPKKRGYSWHCADC 163
CD+C G L C CN H C+ + + PK + W C C
Sbjct: 279 CDICGDIGAEEKLAVCSRCNDGAEHIYCMRVMMQEVPKAK---WLCETC 324
>12_01_0395 -
3117315-3118117,3118354-3118478,3118558-3118770,
3118850-3120076,3120537-3120622,3121197-3121223
Length = 826
Score = 31.1 bits (67), Expect = 0.91
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = -3
Query: 327 ALCP----MTHCDVCHQPGDNTNLVRCDECN-KRYHFTCLEPPLNKNPKKRGYSWHCADC 163
ALCP +T C+VC G L+ C CN H CL+ K W C +C
Sbjct: 2 ALCPDCGAITVCEVCGVLGYKNLLLSCKNCNGAAVHRYCLD----KVDFDGTVDWSCDEC 57
Query: 162 DP 157
P
Sbjct: 58 HP 59
>09_03_0065 + 12013715-12013720,12013899-12014612
Length = 239
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTC 226
CD C QPG L CD C H+ C
Sbjct: 7 CDACKQPGFG-ELYACDACGFHLHYIC 32
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 273 NLVRCDE-CNKRYHFTCLEPPLNKNPKKRG-YSWHCADCD 160
+++ CD C++ +H CL PPL +G W C CD
Sbjct: 330 DIILCDGICDRGFHQYCLNPPLLAEDIPQGDEGWLCPACD 369
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
C C+Q GD++ ++ CD C+ H C+ L + + +W+C C
Sbjct: 506 CIECNQGGDDSLMLLCDICDSSAHTYCV--GLGREVPEG--NWYCGGC 549
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = -3
Query: 303 DVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCDPTDVEENN*YQD 124
D C+ G + NL+ CD C +H C+ + P+ +W C +C +++N+ +++
Sbjct: 444 DECYLCGMDGNLLCCDGCPAAFHSKCVGVVEDLLPEG---NWFCPEC---LIQKNDGFKN 497
Query: 123 LV 118
+V
Sbjct: 498 MV 499
>06_01_0007 +
130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 342 DAPPAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGY-SWHCAD 166
D ALC D + D ++ CD+C K YH CL + K+ W C +
Sbjct: 555 DLGGCALCKQK--DFNNSVFDERTVILCDQCEKEYHVGCLRSQWQVDLKELPEGEWFCCN 612
>03_06_0322 +
33114988-33115130,33116972-33117024,33117432-33117780,
33118450-33118518,33119015-33119150,33120048-33120080
Length = 260
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = -3
Query: 333 PAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
P + C++ + P DN +++C++C+ +H +C+E + K KK + ++C C
Sbjct: 177 PDRIAVFCKCEMPYNP-DNL-MIQCEDCSDWFHPSCVEITI-KEAKKLEH-FYCKSC 229
>09_05_0016 +
20089545-20089748,20090072-20090263,20090644-20090814,
20090915-20091096,20091189-20091435,20091776-20091908,
20092070-20092599,20092940-20093170
Length = 629
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -3
Query: 333 PAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADCD 160
P A P HC C PG+ N ++ D CN F ++ N K G+ C CD
Sbjct: 281 PRARSP--HCSHCGHPGNKKNHIK-DGCN----FCLVDSLENCVEKPAGFICECPSCD 331
>08_02_0704 +
20197529-20197601,20197720-20198062,20198194-20198262,
20199341-20199479,20199727-20199786
Length = 227
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
C++ + P D +V+CD+C +H +C+ + + KK + + C+DC
Sbjct: 143 CEMPYNPDDL--MVQCDDCKDWFHPSCMSMTI-EQAKKLDH-FVCSDC 186
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 330 AALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
A L T C VC+ D+ L+ C+ C+ H C + W C DC
Sbjct: 110 ADLYANTSCSVCNLSNDDELLMLCELCDSAVHTYC----AGLGTEIPEGDWFCTDC 161
>03_05_0728 -
27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 342 DAPPAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFT 229
+APP + MT H+PG NL E N+ Y +T
Sbjct: 103 EAPPGGVDDMTRLSYLHEPGVLQNLATRYELNEIYTYT 140
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 303 DVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
D C G + LV CD C YH C+ NK +G W C +C
Sbjct: 545 DDCRICGMDGTLVCCDGCPWAYHSRCIGQ--NKAFLPQG-DWFCPEC 588
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 306 CDVCHQ-PGDNTNLVRCDECNKRYHFTCLE-PPLNKNPKKRGYSWHCADC 163
C VC D +++ CD C + H CL+ +N P K W+C C
Sbjct: 304 CQVCKVFIIDIHSMIICDACERGIHLKCLQHDGVNVLPPKA--EWYCPTC 351
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 528 VPTDSNDGPPPAVMKKLSKHAEQEVTKPPEEAPVPS 421
+PT PP V + +H Q PP+ AP+P+
Sbjct: 396 MPTPVQLQTPPPVKQPARQHQPQPTPPPPQAAPIPA 431
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 222 EPPLNKNPKKRGYSWHCADCDPTDVEE 142
EPP++K P++ G + ADC T+ EE
Sbjct: 471 EPPVSKEPERCGSARSLADCISTNEEE 497
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
C C++ GD+ ++ CD C+ H C+ L + + +W+C C
Sbjct: 462 CIECNRGGDDNLMLLCDICDSSAHTYCV--GLGRQVPEG--NWYCGGC 505
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 306 CDVCHQPGDNTNLVRCDE--CNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
C +C + L++C C++ +H CL+PPL + +W C+ C
Sbjct: 304 CSICKIGIACSFLIKCKNSTCSRSFHTFCLDPPLQEIIG----TWECSWC 349
>01_06_0192 +
27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 330 AALCP--MTHCDVCHQPGDNTNLVRCDECNKRYHFTC 226
AALC + C C +PG R D C K YH C
Sbjct: 500 AALCRGRLLKCSRCGRPGATIGC-RVDRCPKTYHLPC 535
>03_02_0480 +
8785130-8785192,8785472-8785518,8786415-8786508,
8786598-8786699,8786988-8787259,8787343-8787420,
8787648-8787894
Length = 300
Score = 25.4 bits (53), Expect(2) = 4.6
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -3
Query: 336 PPAALCPMTHCDVCHQPGDNTNLVRC 259
PP CP+ C C G+ N C
Sbjct: 129 PPVFECPLHECFACKNKGEKYNEETC 154
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -3
Query: 273 NLVRCDECNKRYHFTCLEPPLNKNPK 196
+L C C YH CL ++ PK
Sbjct: 175 HLALCRRCPIAYHRKCLPRNISSVPK 200
>07_01_0623 +
4638952-4639024,4640422-4640439,4641312-4641660,
4643917-4643985,4645587-4645722,4646835-4646870
Length = 226
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -3
Query: 333 PAALCPMTHCDVCHQPGDNTNLVRCDECNKRYHFTCLEPPLNKNPKKRGYSWHCADC 163
P + C++ + P D +++C+EC+ +H +C+ + K+ KK + + C C
Sbjct: 142 PDRIAVFCKCEMPYNPDDL--MIQCEECSDWFHPSCIGMTI-KDAKKLEH-FFCQSC 194
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 504 PPPAVMKKLSKHAEQEVTKPPEEA 433
PPPA+ K K + TKPP+ A
Sbjct: 844 PPPAIRKPSPKSPSSDPTKPPQRA 867
>02_03_0188 + 16173801-16173910,16174045-16174402
Length = 155
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 291 GGTRRSASWDRARQAARPTRWWDRGY 368
GGT W R R+ AR +WW RG+
Sbjct: 52 GGTEDRHGW-RLRRPARHRQWWRRGW 76
>05_07_0086 + 27596517-27596777
Length = 86
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 288 AGGTRRSASWDRARQAARPTRWWDRGYSCRRGLEATE 398
A R+A R R R RWW RG G E E
Sbjct: 24 AAAVERAAERSRRRWGGRRQRWWRRGRGRGDGEEGVE 60
>01_07_0111 -
41137822-41138973,41139453-41139540,41139850-41139969,
41140165-41140211,41140796-41141029,41141305-41141505,
41141506-41143407,41144140-41145303,41145574-41145879
Length = 1737
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -1
Query: 686 RRIC*GHLRSHINIKGRRKLKIWRIQKCRILGLPSR*SRYRNRTDLWTRRCSTFPLTA 513
R+IC H HIN+ W++ K RI G S RC PL A
Sbjct: 325 RKICPVHEADHINLDVLSPDDCWKVMKQRIFGPDDDQSGLEEIGRQIAGRCGGLPLVA 382
>07_01_0422 + 3220988-3221536
Length = 182
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 327 ALCPMTHCDVCHQP-GDNTNLVRCDECNKRYHFTCLEPPLNKNP 199
A T C VC + GD L +C +H C++P L + P
Sbjct: 109 AAATQTCCPVCLENYGDGDVLRALPDCGHLFHRECVDPWLRQRP 152
>02_05_1162 - 34593101-34594624
Length = 507
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = -3
Query: 630 TQDMENPEMPHPRITXXXXXXXXPDGSLDT-QMFYVPTDSNDGPPPAVMKK-LSKHAEQE 457
T + P P P +GS D+ Y P PP A + L K+ E+
Sbjct: 309 TAAQQPPPPPAPATAAPPPAALPRNGSDDSLTRAYPPATVTPTPPTATPEYYLPKYQEKP 368
Query: 456 VTKPPEEAPVPS 421
PP AP P+
Sbjct: 369 AAPPPSSAPPPT 380
>02_02_0724 +
13349419-13349641,13349880-13349974,13350366-13350653,
13352838-13352963,13353045-13353204,13354142-13354190,
13354502-13354772,13356071-13356196,13357076-13357231,
13357815-13358058,13358181-13358627,13359348-13359478
Length = 771
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 525 PTDSNDGPPPAVMKKLSKHAEQEVTKPPEEAPVPSVVDDTN 403
P+ S G L + QE+ + P+PS D+TN
Sbjct: 535 PSSSGKGTQAQKRNALGRQPSQEILSEEKTLPLPSTKDETN 575
>01_02_0080 + 10933064-10933945
Length = 293
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 336 PPAALCPMTHCDVCHQPGDNT 274
PP A P +H +CH P +T
Sbjct: 166 PPCAAAPASHSGMCHSPDPST 186
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,362,204
Number of Sequences: 37544
Number of extensions: 406349
Number of successful extensions: 1420
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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