Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17g02
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009807-1|AAP88809.1|  568|Homo sapiens numb homolog (Drosophil...    30   8.5  
BC068476-1|AAH68476.1|  592|Homo sapiens numb homolog (Drosophil...    30   8.5  
BC020788-1|AAH20788.1|  245|Homo sapiens NUMB protein protein.         30   8.5  
AF171941-1|AAD54282.1|  592|Homo sapiens NUMB isoform 4 protein.       30   8.5  
AF171940-1|AAD54281.1|  640|Homo sapiens NUMB isoform 3 protein.       30   8.5  
AF015041-1|AAD01549.1|  609|Homo sapiens NUMB-R protein protein.       30   8.5  

>BT009807-1|AAP88809.1|  568|Homo sapiens numb homolog
           (Drosophila)-like protein.
          Length = 568

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 81  ALGNNAIRKQLTSSSKGVLVSFQKDRDLTTDHVQLVVEPLVSPRG*EPPPAYFCREAVTR 260
           A+G  +++  L  S+ G+ V   K +DL  D     V      R  +   +Y CR+  TR
Sbjct: 67  AMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTR 126


>BC068476-1|AAH68476.1|  592|Homo sapiens numb homolog (Drosophila)
           protein.
          Length = 592

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 81  ALGNNAIRKQLTSSSKGVLVSFQKDRDLTTDHVQLVVEPLVSPRG*EPPPAYFCREAVTR 260
           A G  A++  L  S+ G+ V  +K +DL  D     V      R  +   +Y CR+  TR
Sbjct: 67  ATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTR 126


>BC020788-1|AAH20788.1|  245|Homo sapiens NUMB protein protein.
          Length = 245

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 81  ALGNNAIRKQLTSSSKGVLVSFQKDRDLTTDHVQLVVEPLVSPRG*EPPPAYFCREAVTR 260
           A G  A++  L  S+ G+ V  +K +DL  D     V      R  +   +Y CR+  TR
Sbjct: 67  ATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTR 126


>AF171941-1|AAD54282.1|  592|Homo sapiens NUMB isoform 4 protein.
          Length = 592

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 81  ALGNNAIRKQLTSSSKGVLVSFQKDRDLTTDHVQLVVEPLVSPRG*EPPPAYFCREAVTR 260
           A G  A++  L  S+ G+ V  +K +DL  D     V      R  +   +Y CR+  TR
Sbjct: 67  ATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTR 126


>AF171940-1|AAD54281.1|  640|Homo sapiens NUMB isoform 3 protein.
          Length = 640

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 81  ALGNNAIRKQLTSSSKGVLVSFQKDRDLTTDHVQLVVEPLVSPRG*EPPPAYFCREAVTR 260
           A G  A++  L  S+ G+ V  +K +DL  D     V      R  +   +Y CR+  TR
Sbjct: 67  ATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTR 126


>AF015041-1|AAD01549.1|  609|Homo sapiens NUMB-R protein protein.
          Length = 609

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 81  ALGNNAIRKQLTSSSKGVLVSFQKDRDLTTDHVQLVVEPLVSPRG*EPPPAYFCREAVTR 260
           A+G  +++  L  S+ G+ V   K +DL  D     V      R  +   +Y CR+  TR
Sbjct: 108 AMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTR 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,832,876
Number of Sequences: 237096
Number of extensions: 2330934
Number of successful extensions: 8325
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8325
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)