Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17f06
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W2E8 Cluster: CG10320-PA; n=7; Endopterygota|Rep: CG1... 99 3e-20
UniRef50_UPI0000586C08 Cluster: PREDICTED: similar to NADH dehyd... 73 2e-12
UniRef50_Q4SNW8 Cluster: Chromosome 15 SCAF14542, whole genome s... 69 3e-11
UniRef50_O43676 Cluster: NADH dehydrogenase [ubiquinone] 1 beta ... 69 5e-11
UniRef50_Q09JJ9 Cluster: NADH-dehydrogenase (Ubiquinone) 1 beta-... 62 3e-09
UniRef50_Q18095 Cluster: Putative uncharacterized protein; n=2; ... 61 8e-09
UniRef50_Q5BQW1 Cluster: SJCHGC09788 protein; n=1; Schistosoma j... 53 2e-06
UniRef50_UPI00015B52DA Cluster: PREDICTED: similar to NADH dehyd... 52 5e-06
UniRef50_Q20AL5 Cluster: Mitochondrial NADH dehydrogenase (Ubiqu... 44 0.001
UniRef50_Q4P461 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_UPI0000DA41EE Cluster: PREDICTED: similar to NADH dehyd... 42 0.004
UniRef50_A7S298 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.016
UniRef50_Q00YK0 Cluster: Chromosome 11 contig 1, DNA sequence; n... 36 0.34
UniRef50_Q6BUH9 Cluster: Similar to wi|NCU09002.1 Neurospora cra... 35 0.78
UniRef50_Q0UGG6 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 1.8
UniRef50_A3LYR8 Cluster: Predicted protein; n=3; Ascomycota|Rep:... 33 2.4
UniRef50_UPI00005A5942 Cluster: PREDICTED: hypothetical protein ... 33 3.1
UniRef50_A1DF89 Cluster: NADH-ubiquinone oxidoreductase B12 subu... 33 3.1
UniRef50_Q9RWF5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_A1IEI9 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_P31936 Cluster: Bone sialoprotein 2; n=2; Mammalia|Rep:... 32 4.1
UniRef50_Q66S02 Cluster: Putative uncharacterized protein; n=1; ... 32 5.5
UniRef50_UPI00005A5EC4 Cluster: PREDICTED: similar to G protein-... 31 9.6
UniRef50_Q4P976 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_Q9Y4L5 Cluster: Zinc finger protein 364; n=22; Eumetazo... 31 9.6
>UniRef50_Q9W2E8 Cluster: CG10320-PA; n=7; Endopterygota|Rep:
CG10320-PA - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 99.1 bits (236), Expect = 3e-20
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = -2
Query: 316 MGGHGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHP-GFGTRWQ 140
MGGH HG PYTVPH S + V+ +PQL E+++AL +GLKDPW+RNE WRY P FGT
Sbjct: 1 MGGH-HGEPYTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLRNEVWRYEPKAFGTHRS 59
Query: 139 RARKFFFRGFPIGLGLTVITVALD 68
R F FRG +G + TVA++
Sbjct: 60 RLNTFLFRGLGVGFCAFLATVAVE 83
>UniRef50_UPI0000586C08 Cluster: PREDICTED: similar to NADH
dehydrogenase, putative; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to NADH
dehydrogenase, putative - Strongylocentrotus purpuratus
Length = 89
Score = 72.9 bits (171), Expect = 2e-12
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -2
Query: 283 VPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGF-GTRWQRARKFFFRGFP 107
+P + + V+ +P+L +++ LA++GLKDPW+RNE WRY P F W R F+G P
Sbjct: 8 IPDWRIYKVEDVPKLKAVQEKLALRGLKDPWLRNEVWRYQPCFKPIPWWR---IIFKGLP 64
Query: 106 IGLGLTVITVALDK 65
IG GL V+ V ++K
Sbjct: 65 IGAGLFVVAVGIEK 78
>UniRef50_Q4SNW8 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 84
Score = 69.3 bits (162), Expect = 3e-11
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -2
Query: 316 MGG-HGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQ 140
MGG HGHG ++P + Q+ +G P L+ +K LA +GLKDPW RNEAWRY GF R
Sbjct: 1 MGGDHGHGK-ISMPDWRQWKTEGTP-LEFTQKRLAARGLKDPWARNEAWRYSGGF-ARAV 57
Query: 139 RARKFFFRGFPIGLGLTVITVALD 68
FRGF G + +A++
Sbjct: 58 TLSDVLFRGFKWGFAAFTVALAVE 81
>UniRef50_O43676 Cluster: NADH dehydrogenase [ubiquinone] 1 beta
subcomplex subunit 3; n=23; Euteleostomi|Rep: NADH
dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 -
Homo sapiens (Human)
Length = 98
Score = 68.5 bits (160), Expect = 5e-11
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -2
Query: 310 GHGHGP-PYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRA 134
GH HG +P Y Q+ ++G P L+ ++K LA KGL+DPW RNEAWRY GF +
Sbjct: 6 GHEHGHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF-AKSVSF 63
Query: 133 RKFFFRGFPIGLGLTVITVALDKF 62
FF+GF G V+ V + +
Sbjct: 64 SDVFFKGFKWGFAAFVVAVGAEYY 87
>UniRef50_Q09JJ9 Cluster: NADH-dehydrogenase (Ubiquinone) 1
beta-subcomplex 3; n=1; Argas monolakensis|Rep:
NADH-dehydrogenase (Ubiquinone) 1 beta-subcomplex 3 -
Argas monolakensis
Length = 102
Score = 62.5 bits (145), Expect = 3e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = -2
Query: 283 VPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPI 104
+P + V+ +P+L ++++ LA GLKDPW+RNE W++ R F GF
Sbjct: 13 IPDPKIYKVEDVPRLMQVKRELASYGLKDPWLRNEVWKFQLQHIPLQSRIAGTLFSGFKY 72
Query: 103 GLGLTVITVALD 68
GL L V+TVALD
Sbjct: 73 GLALAVLTVALD 84
>UniRef50_Q18095 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 103
Score = 61.3 bits (142), Expect = 8e-09
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = -2
Query: 316 MGGHGHGPPYTVPHYSQFT-VKGIPQLDELEKALAVKGLKDPWIRNEAWRY---HPGFGT 149
MGG GH P+ +P+YS ++ + PQL + EK LA GLKDPWIRN + Y +P
Sbjct: 1 MGG-GHHEPFKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVG 59
Query: 148 RWQRARKFFFRGFPIGLGLTVITVALDK 65
+W +K G+ G+ T + +++
Sbjct: 60 QWAHFKKLILPGWKAGVAFTAALIFVEE 87
>UniRef50_Q5BQW1 Cluster: SJCHGC09788 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09788 protein - Schistosoma
japonicum (Blood fluke)
Length = 94
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -2
Query: 280 PHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPG-FGTRWQRARKFFFRGFPI 104
P + +T+ P L E K LA GL+DPWIRN AWRY P + +R + R +F+ P
Sbjct: 8 PDWKSYTLDH-PALQEHVKKLAKLGLRDPWIRNYAWRYSPKIYKSRPEWFRGIYFKRLPH 66
Query: 103 GLGLTVI-TVALDKF 62
G+ L ++ + ++KF
Sbjct: 67 GIFLGIVASFCINKF 81
>UniRef50_UPI00015B52DA Cluster: PREDICTED: similar to NADH
dehydrogenase, putative; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to NADH dehydrogenase, putative -
Nasonia vitripennis
Length = 109
Score = 52.0 bits (119), Expect = 5e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = -2
Query: 316 MGGHGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQR 137
MGGH H VP S + V+ L ++++ LA KGLKDPW+RN WR +
Sbjct: 1 MGGHHHVKLPNVPDPSIYKVEDAKDLLKVQERLAKKGLKDPWMRNYVWRCTIDKADKHPN 60
Query: 136 --ARKFFFRGFPIGLGLTVITVALDKF 62
KFF G+ + L +T+ ++ F
Sbjct: 61 WVLLKFFTYGWKYWVPLVGLTIGIEHF 87
>UniRef50_Q20AL5 Cluster: Mitochondrial NADH dehydrogenase
(Ubiquinone)-like protein; n=2; Euteleostomi|Rep:
Mitochondrial NADH dehydrogenase (Ubiquinone)-like
protein - Ictalurus punctatus (Channel catfish)
Length = 48
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 316 MGG-HGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWR 170
MGG HGH +P + +G P L+ ++ LA +GLKDPW RNEAWR
Sbjct: 1 MGGDHGHSK-LPMPDCKIWKWEGTP-LEFTQQRLARRGLKDPWARNEAWR 48
>UniRef50_Q4P461 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 71
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -2
Query: 202 KDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVITVALD 68
+DPW + EAWR HP F R+ AR F GF +GLG + +A+D
Sbjct: 6 RDPWAKREAWRKHPVFSHRF-FARN-IFPGFGLGLGAFAVYLAID 48
>UniRef50_UPI0000DA41EE Cluster: PREDICTED: similar to NADH
dehydrogenase (ubiquinone) 1 beta subcomplex 3; n=1;
Rattus norvegicus|Rep: PREDICTED: similar to NADH
dehydrogenase (ubiquinone) 1 beta subcomplex 3 - Rattus
norvegicus
Length = 81
Score = 42.3 bits (95), Expect = 0.004
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -2
Query: 241 LDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVITVALDKF 62
L+ ++K LA +GL+DP NEAWRY F + + +GF +G V+ + + F
Sbjct: 3 LEMMQKKLAARGLRDPRTYNEAWRYMGDFASN-ITSMSVIVKGFKLGFAAFVVALGAEYF 61
>UniRef50_A7S298 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 65
Score = 40.3 bits (90), Expect = 0.016
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -2
Query: 205 LKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVITVALDK 65
++DPW R EAWRYHP R F G +G V+ AL+K
Sbjct: 11 MRDPWARFEAWRYHPSINKHANIRR--MFPGLGWAVGAFVVACALEK 55
>UniRef50_Q00YK0 Cluster: Chromosome 11 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 11 contig 1, DNA
sequence - Ostreococcus tauri
Length = 52
Score = 35.9 bits (79), Expect = 0.34
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -2
Query: 205 LKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVITVALDK 65
++DP+ R +AWR HP W +A GF +GL + VA++K
Sbjct: 1 MRDPFTRADAWRAHPLLNKPWSKA----LPGFGLGLAAFLAYVAVEK 43
>UniRef50_Q6BUH9 Cluster: Similar to wi|NCU09002.1 Neurospora
crassa; n=1; Debaryomyces hansenii|Rep: Similar to
wi|NCU09002.1 Neurospora crassa - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 57
Score = 34.7 bits (76), Expect = 0.78
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 205 LKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVITVALDK 65
+ +PW + +AWRY F +R+ R K F GF I LG + VA ++
Sbjct: 1 MSNPWAKRDAWRYQGQF-SRFNRF-KNAFPGFGIALGAFTLYVAYEQ 45
>UniRef50_Q0UGG6 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 88
Score = 33.5 bits (73), Expect = 1.8
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 223 ALAVKGLK-DPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVI 83
A + G K DPW R E WRY F TR+QR F+G GLG+ +
Sbjct: 16 AASANGTKGDPWARYEQWRYTGPF-TRFQR-----FKGSFPGLGIATV 57
>UniRef50_A3LYR8 Cluster: Predicted protein; n=3; Ascomycota|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 57
Score = 33.1 bits (72), Expect = 2.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 199 DPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVITVALDK 65
+PW + +AWRY F +R R K F G +G G V+ VA +K
Sbjct: 4 NPWAKRDAWRYEGQF-SRINRF-KSAFPGLGLGAGAFVLYVAYEK 46
>UniRef50_UPI00005A5942 Cluster: PREDICTED: hypothetical protein
XP_860186; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_860186 - Canis familiaris
Length = 764
Score = 32.7 bits (71), Expect = 3.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3
Query: 63 LWEGGEXWAWSRARGR 16
LW GE WAWSR RGR
Sbjct: 624 LWGRGEPWAWSRPRGR 639
>UniRef50_A1DF89 Cluster: NADH-ubiquinone oxidoreductase B12
subunit, putative; n=9; Pezizomycotina|Rep:
NADH-ubiquinone oxidoreductase B12 subunit, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 82
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -2
Query: 217 AVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPI 104
+V +DPW R EAWRY F +R+ R ++ F GF I
Sbjct: 20 SVYAKRDPWARYEAWRYTGPF-SRFNRFKR-IFPGFGI 55
>UniRef50_Q9RWF5 Cluster: Putative uncharacterized protein; n=1;
Deinococcus radiodurans|Rep: Putative uncharacterized
protein - Deinococcus radiodurans
Length = 266
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 253 GIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVI 83
G P L EL + + +DPW + E W RWQR ++ + G+GL V+
Sbjct: 21 GAPALRELLRPQTAEDPRDPWAKAE-WTRAESSAARWQRRKEQGQQVARRGVGLAVL 76
>UniRef50_A1IEI9 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 249
Score = 32.3 bits (70), Expect = 4.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 156 LALAGREPENSSLEDSPLDWDSQ*SQWLWINLWE 55
LAL GR P+ + P W+ + W+W +W+
Sbjct: 204 LALEGRLPDRMMINTHPQRWEGRLGPWMWELVWQ 237
>UniRef50_P31936 Cluster: Bone sialoprotein 2; n=2; Mammalia|Rep:
Bone sialoprotein 2 - Sus scrofa (Pig)
Length = 300
Score = 32.3 bits (70), Expect = 4.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 35 HAHXSPPSHKF-IQSHCDYCESQSNGESSKEE 127
HA+ PP +F +QS D E NG+SS+EE
Sbjct: 32 HAYFYPPLKRFPVQSSSDSSEENGNGDSSEEE 63
>UniRef50_Q66S02 Cluster: Putative uncharacterized protein; n=1;
Oikopleura dioica|Rep: Putative uncharacterized protein
- Oikopleura dioica (Tunicate)
Length = 514
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 372 LSIFKRKSSSLKTVCEVNEWVVTDMGPRTQCLTTPSLLSKVSHNWMSL 229
++ F+RK SL+TV ++ W+ T + + L T LLS + M L
Sbjct: 440 MAAFRRKIPSLRTVDDLRHWIRTKLPEKRYLLDTNYLLSHLEQEIMYL 487
>UniRef50_UPI00005A5EC4 Cluster: PREDICTED: similar to G
protein-coupled receptor associated sorting protein 1;
n=1; Canis lupus familiaris|Rep: PREDICTED: similar to G
protein-coupled receptor associated sorting protein 1 -
Canis familiaris
Length = 1318
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 80 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 202
C Y + S+ +S EE +G++ +S S + SP I PW++
Sbjct: 653 CMYTANGSSWKSRPEEETGTVDSSFWSEIPSPETIIGPWLW 693
>UniRef50_Q4P976 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 372
Score = 31.1 bits (67), Expect = 9.6
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 65 FIQSHCDYCESQ-SNGESSKEEFSGSLPASAKSRVISPSLISDPWIFKSFNS 217
F++SH + S+ S ES E S S A K + SLI+ PWI +F +
Sbjct: 65 FVRSHSESLRSRMSMLESDHAELSASERAQLKESLEIASLINLPWIVSAFEA 116
>UniRef50_Q9Y4L5 Cluster: Zinc finger protein 364; n=22;
Eumetazoa|Rep: Zinc finger protein 364 - Homo sapiens
(Human)
Length = 304
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 80 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 202
C C NGE S + S S ASA +R + S + D W F
Sbjct: 265 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLHDRWTF 304
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,588,933
Number of Sequences: 1657284
Number of extensions: 9038074
Number of successful extensions: 24833
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 24198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24822
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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