Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17f02
(642 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 25 2.0
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 25 2.0
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 25 2.0
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 25 2.0
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 25 2.0
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 25 2.0
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 23 6.2
Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein. 23 8.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 8.2
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 23 8.2
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 23 8.2
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +ST+ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +ST+ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +ST+ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +ST+ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +ST+ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +ST+ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIASSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 555 LDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
L AH G++ +S++ HH+ H+APA+ +P
Sbjct: 20 LPVAHH--GSIATSHSSIQHHAAPAIHHVGSVHAAPAIYQHSAP 61
>Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein.
Length = 101
Score = 23.0 bits (47), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 357 DVDDEDGESLSVHCSTPS 304
D +D D ESL H S+PS
Sbjct: 34 DEEDFDEESLKPHSSSPS 51
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = -1
Query: 477 HHMQP*HSAPALCTPGSP-HRVNL 409
HH Q HSA C P P H N+
Sbjct: 193 HHSQQQHSASPRCYPMPPEHMYNM 216
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.0 bits (47), Expect = 8.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -1
Query: 531 GAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSP 424
G++ +S++ HH+ H+APA+ +P
Sbjct: 26 GSIATSHSSIQHHAAPAIHHVGSIHAAPAIYQHSAP 61
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 23.0 bits (47), Expect = 8.2
Identities = 14/56 (25%), Positives = 18/56 (32%)
Frame = -1
Query: 582 EGGVPGLRALDAAHDELGAVLRHNSTLXARXTALTHHMQP*HSAPALCTPGSPHRV 415
+ V R L+ H S+L A H S P G PHR+
Sbjct: 286 QSAVRCFRCLERGHTTADCAGEDRSSLCLHCGAADHRAASCTSDPKCIVCGGPHRI 341
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,941
Number of Sequences: 2352
Number of extensions: 8356
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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