Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17f02
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060686-1|AAL28234.1|  440|Drosophila melanogaster GH12581p pro...    33   0.43 
AF102237-1|AAC99418.1|  440|Drosophila melanogaster imaginal dis...    33   0.43 
AE014134-2717|AAF53536.1|  440|Drosophila melanogaster CG4475-PA...    33   0.43 
AE014298-937|AAF46191.1|  318|Drosophila melanogaster CG14440-PA...    32   0.76 
AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA...    28   9.4  

>AY060686-1|AAL28234.1|  440|Drosophila melanogaster GH12581p
           protein.
          Length = 440

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 AVHRETLPVLIVDIADARELDGFXLLTKFLREVDSMW 426
           A+H+E    L+ D+ D+   DGF L    L  V+S W
Sbjct: 187 ALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTW 223


>AF102237-1|AAC99418.1|  440|Drosophila melanogaster imaginal disc
           growth factor 2 protein.
          Length = 440

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 AVHRETLPVLIVDIADARELDGFXLLTKFLREVDSMW 426
           A+H+E    L+ D+ D+   DGF L    L  V+S W
Sbjct: 187 ALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTW 223


>AE014134-2717|AAF53536.1|  440|Drosophila melanogaster CG4475-PA
           protein.
          Length = 440

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 AVHRETLPVLIVDIADARELDGFXLLTKFLREVDSMW 426
           A+H+E    L+ D+ D+   DGF L    L  V+S W
Sbjct: 187 ALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTW 223


>AE014298-937|AAF46191.1|  318|Drosophila melanogaster CG14440-PA
           protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -1

Query: 627 MHQKLFAAVKIEASXEGGVPGLRALDAAH 541
           +H  L A V +EAS  GGVPGL  L   H
Sbjct: 157 LHHHLSAGVVVEASQLGGVPGLANLGVPH 185


>AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA
           protein.
          Length = 588

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
 Frame = -1

Query: 471 MQP*HSAPALCTPGSPHRVNL------SEELCQQXESIQLPCISDVDDEDGESLSV 322
           ++P  + PA   PG+P R N+      ++++     +++L    D+DD DGE+L +
Sbjct: 369 LRPPSARPASARPGAPRRRNVEIVLQPNDQIKMSGINVKLETFGDLDD-DGENLVI 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,777,199
Number of Sequences: 53049
Number of extensions: 341622
Number of successful extensions: 840
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)