Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17f01
(852 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6; Nucle... 155 1e-36
UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7; Nucle... 134 2e-30
UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in PP3... 125 1e-27
UniRef50_Q0N3Y8 Cluster: CALYX/PEP; n=6; Nucleopolyhedrovirus|Re... 66 8e-10
UniRef50_A0EZ11 Cluster: Calyx/pep; n=2; Nucleopolyhedrovirus|Re... 64 6e-09
UniRef50_Q77LV8 Cluster: Calyx/pep; n=4; Nucleopolyhedrovirus|Re... 57 6e-07
UniRef50_P36865 Cluster: Polyhedral envelope protein; n=2; Lyman... 54 5e-06
UniRef50_Q91BA2 Cluster: Calyx protein; n=2; Nucleopolyhedroviru... 53 1e-05
UniRef50_Q287M3 Cluster: CALYX/PEP; n=3; Nucleopolyhedrovirus|Re... 51 4e-05
UniRef50_Q0FEW6 Cluster: Flagellar motor protein; n=1; alpha pro... 38 0.42
UniRef50_A5ICJ8 Cluster: Tpr; n=5; Legionella pneumophila|Rep: T... 36 0.98
UniRef50_Q6JKA7 Cluster: Putative uncharacterized protein; n=2; ... 35 2.3
UniRef50_Q2SGV4 Cluster: Methyl-accepting chemotaxis protein; n=... 35 2.3
UniRef50_Q1RQ02 Cluster: Zinc finger protein; n=1; Ciona intesti... 35 2.3
UniRef50_A0CPG4 Cluster: Chromosome undetermined scaffold_23, wh... 35 3.0
UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putativ... 34 5.2
UniRef50_A5DR48 Cluster: Putative uncharacterized protein; n=1; ... 34 5.2
UniRef50_Q9CCY6 Cluster: Possible membrane transport protein; n=... 33 6.9
UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family p... 33 6.9
UniRef50_A0YKJ9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A0LA72 Cluster: Methyl-accepting chemotaxis sensory tra... 33 6.9
UniRef50_Q22RF4 Cluster: Viral A-type inclusion protein repeat c... 33 6.9
UniRef50_UPI00004D0E8C Cluster: Protein FAM81B.; n=3; Xenopus tr... 33 9.1
UniRef50_Q6YQH0 Cluster: ATP-dependent Zn protease; n=19; Candid... 33 9.1
UniRef50_Q15TL3 Cluster: MscS Mechanosensitive ion channel precu... 33 9.1
UniRef50_Q22T20 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
>UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 252
Score = 155 bits (377), Expect = 1e-36
Identities = 81/98 (82%), Positives = 85/98 (86%)
Frame = -2
Query: 782 QIFDALEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVIL 603
QIFDALEKIRHQNDMLM QFLELSN+MTGVRNQNVQLLAALETAKDVIL
Sbjct: 151 QIFDALEKIRHQNDMLMSNVNQINLNQTNQFLELSNMMTGVRNQNVQLLAALETAKDVIL 210
Query: 602 TRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQT 489
TRLNTLL+EITDSLPDLT MLDKLAEQLL+AINT+QQT
Sbjct: 211 TRLNTLLAEITDSLPDLTSMLDKLAEQLLDAINTVQQT 248
>UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 297
Score = 134 bits (325), Expect = 2e-30
Identities = 82/177 (46%), Positives = 106/177 (59%)
Frame = -2
Query: 782 QIFDALEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVIL 603
QI DALEK+ Q+D+++ QFLELSN + VR QN Q+LAALET KD IL
Sbjct: 129 QILDALEKLARQSDLVVNSLNQISLNQSNQFLELSNTLNTVRAQNAQILAALETTKDAIL 188
Query: 602 TRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASSXXXX 423
TRLN L+ +I +LPD + L +LA++LL+AIN++ QT R E+NNTNSILTNLASS
Sbjct: 189 TRLNALVDDIKAALPDQSAQLQELADKLLDAINSVAQTLRGEMNNTNSILTNLASSITNI 248
Query: 422 XXXXXXXXXXIENLAXXXXXXXXXXXXXXGNFNEADRQKLDLVHTLVNDIKNILTGT 252
IE + G +ADRQ L+ V +LV +I+NIL GT
Sbjct: 249 NSTLNNLLAAIEGIG-----------GDGGGLGDADRQALNEVLSLVTEIRNILMGT 294
>UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in
PP34-EXO intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 25.1 kDa
protein in PP34-EXO intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 219
Score = 125 bits (302), Expect = 1e-27
Identities = 61/64 (95%), Positives = 61/64 (95%)
Frame = -1
Query: 234 MSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGES 55
MSDKTPTKK G HAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQN GES
Sbjct: 1 MSDKTPTKKGGSHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQNPGES 60
Query: 54 AVFQ 43
AVFQ
Sbjct: 61 AVFQ 64
>UniRef50_Q0N3Y8 Cluster: CALYX/PEP; n=6; Nucleopolyhedrovirus|Rep:
CALYX/PEP - Clanis bilineata nucleopolyhedrosis virus
Length = 338
Score = 66.5 bits (155), Expect = 8e-10
Identities = 38/113 (33%), Positives = 57/113 (50%)
Frame = -2
Query: 773 DALEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVILTRL 594
+ L+++ QND++M Q LE++N + +R QNV L D + ++
Sbjct: 172 ETLDRLVRQNDLIMSAVNQLNVSNSNQHLEITNQLNAIRLQNVNTSNQLTALADALEKQI 231
Query: 593 NTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
T+ SEI L D+ D+L L A+ +Q RNEL N N+IL NL SS
Sbjct: 232 ATIASEIERLLGDVDRRFDQLLAALTAALAQLQDAVRNELTNVNAILNNLTSS 284
>UniRef50_A0EZ11 Cluster: Calyx/pep; n=2; Nucleopolyhedrovirus|Rep:
Calyx/pep - Ecotropis obliqua NPV
Length = 330
Score = 63.7 bits (148), Expect = 6e-09
Identities = 34/114 (29%), Positives = 60/114 (52%)
Frame = -2
Query: 776 FDALEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVILTR 597
+D LE+I QND+++ Q LE++N + ++ QN+ + L D++ +
Sbjct: 159 YDILERISKQNDVIINGLSQLCINSSNQHLEINNALNTIKLQNITITGQLTQLIDLLENQ 218
Query: 596 LNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
L + +++ L + L+ + L +A+ +Q + RNEL N NSIL NL SS
Sbjct: 219 LVNIAADLRSLLDNFDTKLNNFLDALNKALAQLQDSVRNELTNINSILNNLTSS 272
>UniRef50_Q77LV8 Cluster: Calyx/pep; n=4; Nucleopolyhedrovirus|Rep:
Calyx/pep - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 340
Score = 56.8 bits (131), Expect = 6e-07
Identities = 34/111 (30%), Positives = 53/111 (47%)
Frame = -2
Query: 767 LEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNT 588
LEKI QND+L+ F E++N ++ + QN L + + + +L
Sbjct: 180 LEKISRQNDLLVSAVNQMTLTNTNNFAEINNSLSTISLQNSTLTGQVARLLESVDRQLPL 239
Query: 587 LLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
LL + ++ L++ + QL E++N Q RNEL NS L NL SS
Sbjct: 240 LLDRLNLLSSEVRQQLNQFSGQLAESLNRFQDVLRNELTGINSALNNLTSS 290
>UniRef50_P36865 Cluster: Polyhedral envelope protein; n=2;
Lymantria dispar MNPV|Rep: Polyhedral envelope protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 312
Score = 54.0 bits (124), Expect = 5e-06
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = -2
Query: 773 DALEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAAL-ETAKDVILTR 597
+ L++I QND+++ ELSN++ ++ QNV ++ L + D +L+
Sbjct: 144 ELLDRIVRQNDLILNGLNQLCLNHSNHHFELSNILNSIKLQNVNIINQLSQIFDDGVLSG 203
Query: 596 LNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
L+ LS + + DL L A+ +Q + RN+L N NSIL NL SS
Sbjct: 204 LDEKLSRL---IADLDGHFADFGSALDAALAQLQDSLRNDLTNINSILANLTSS 254
>UniRef50_Q91BA2 Cluster: Calyx protein; n=2;
Nucleopolyhedrovirus|Rep: Calyx protein - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 344
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/110 (26%), Positives = 53/110 (48%)
Frame = -2
Query: 764 EKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTL 585
E I QN+ ++ QF+EL+N + +R QN + A + ++ I T N +
Sbjct: 188 EAISKQNETILNNVNQLSVNATNQFVELNNAVAAIRAQNSSIAAQVSAIQEAIETGFNNV 247
Query: 584 LSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
+ + L L L + + +Q+T R E+ + NS+++NLA+S
Sbjct: 248 EQSLESLIAGLETRLSSALNALNDILVRLQETVRAEITSLNSVISNLAAS 297
>UniRef50_Q287M3 Cluster: CALYX/PEP; n=3; Nucleopolyhedrovirus|Rep:
CALYX/PEP - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 341
Score = 50.8 bits (116), Expect = 4e-05
Identities = 33/111 (29%), Positives = 53/111 (47%)
Frame = -2
Query: 767 LEKIRHQNDMLMXXXXXXXXXXXXQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNT 588
LE++ QND+L+ Q LELSNV+ +R Q+V A + + + L
Sbjct: 181 LERVARQNDLLLTNLNQLSTTNANQHLELSNVLNAIRLQSVTTAAQVGQILETV-QGLGE 239
Query: 587 LLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
+ T L ++ L + L A+N + + RN+L+ +IL NL SS
Sbjct: 240 FDGDFTKLLAEIDARLAAQSSALQAALNQLAEQVRNDLSGITAILNNLTSS 290
>UniRef50_Q0FEW6 Cluster: Flagellar motor protein; n=1; alpha
proteobacterium HTCC2255|Rep: Flagellar motor protein -
alpha proteobacterium HTCC2255
Length = 638
Score = 37.5 bits (83), Expect = 0.42
Identities = 27/89 (30%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = -2
Query: 689 LELSNVMTGVRNQNVQL--LAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQ-- 522
LEL+N+ + + Q+ +L L++L + K+ T LN+L +EI L + +++++
Sbjct: 52 LELNNLSSQIEQQDSELNNLSSLISKKE---TELNSLSTEILSKEERLNKLTSEISQKDL 108
Query: 521 LLEAINTMQQTQRNELNNTNSILTNLASS 435
+L++++T Q ELN+ + LT+LAS+
Sbjct: 109 MLDSLSTQVTEQDLELNDLSLQLTDLASA 137
>UniRef50_A5ICJ8 Cluster: Tpr; n=5; Legionella pneumophila|Rep: Tpr
- Legionella pneumophila (strain Corby)
Length = 546
Score = 36.3 bits (80), Expect = 0.98
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = -2
Query: 605 LTRLNTLLSEITDSLPDLTLMLDKLAEQ---LLEAINTMQQTQRNELNNTNSILTNLA 441
LTRLNT LS + + PDLT ++L EQ LLE+ N+ +T RN+L ++T L+
Sbjct: 319 LTRLNTQLSSLQLANPDLTRRNERLEEQNRELLESYNSHIKT-RNKLFFPTLVITGLS 375
>UniRef50_Q6JKA7 Cluster: Putative uncharacterized protein; n=2;
Neodiprion sertifer NPV|Rep: Putative uncharacterized
protein - Neodiprion sertifer NPV
Length = 386
Score = 35.1 bits (77), Expect = 2.3
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = -2
Query: 668 TGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQT 489
T + + + +++ LE D I + LN L SE++D++ +T + + + A+ + +
Sbjct: 273 TAIESISENIISQLEVNNDAITSELNKLSSEVSDNIDTITSDVTTAFDNIQTALQKSETS 332
Query: 488 QRNELNNTNSILTNL 444
+ +N+T ++ L
Sbjct: 333 TVSGINDTGIVIEKL 347
>UniRef50_Q2SGV4 Cluster: Methyl-accepting chemotaxis protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Methyl-accepting
chemotaxis protein - Hahella chejuensis (strain KCTC
2396)
Length = 546
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/68 (25%), Positives = 39/68 (57%)
Frame = -2
Query: 638 LAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNS 459
LAAL + + ++ L++ +T S+ LTL +D+L+ +++++ Q Q+ E + S
Sbjct: 249 LAALSVQFNTFVDKIRNLVTNVTSSIGLLTLSVDELSNAAMKSVDN-AQNQQKETDQVAS 307
Query: 458 ILTNLASS 435
+ +++S
Sbjct: 308 AMNQMSAS 315
>UniRef50_Q1RQ02 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 868
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -2
Query: 626 ETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAIN---TMQQTQRNELNNTNSI 456
+ A+ + T+LN L E DL DK+++ L ++N + + NE+ +TNS+
Sbjct: 99 DQAQRSVRTQLNNFLREEVKPTKDLKKTFDKVSDDYLSSLNKHAAANKLKPNEVEDTNSV 158
Query: 455 LTN 447
LT+
Sbjct: 159 LTS 161
>UniRef50_A0CPG4 Cluster: Chromosome undetermined scaffold_23, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_23,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 642
Score = 34.7 bits (76), Expect = 3.0
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = -2
Query: 656 NQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE 477
NQ +Q++ +L + N + E+T L L L ++ A+QLL+ +N+ + T++N
Sbjct: 291 NQRLQIIEQRNKEIQDLLNKSNKMAKELTKDLKRLFLSVNDDADQLLDNLNSPRPTKQNV 350
Query: 476 L 474
L
Sbjct: 351 L 351
>UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 5296
Score = 33.9 bits (74), Expect = 5.2
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = -2
Query: 686 ELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI 507
+L + +T + ++Q+ AL +KD +++LN + +I D L+KL +L EA+
Sbjct: 2032 QLQDKLTEKKKNSLQMKQAL-ASKDAEISKLNEEIEQIKSEKEDQDKELEKLNNELTEAL 2090
Query: 506 NTMQQTQR---NELNNTN 462
++ ++ E NN N
Sbjct: 2091 EKLENGKKKSSQEQNNEN 2108
>UniRef50_A5DR48 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 368
Score = 33.9 bits (74), Expect = 5.2
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -2
Query: 641 LLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKL--AEQLLEAINTMQQTQRNELNN 468
LL+ +++ +DV++ + L + I L D T + KL A + +E +T+ + Q+ EL N
Sbjct: 145 LLSMVDSVEDVLIQKEQNLFNWIEKVLQDNTALKSKLAAATEKMETFSTISKNQQEELEN 204
Query: 467 TN 462
++
Sbjct: 205 SH 206
>UniRef50_Q9CCY6 Cluster: Possible membrane transport protein; n=5;
Mycobacterium|Rep: Possible membrane transport protein -
Mycobacterium leprae
Length = 618
Score = 33.5 bits (73), Expect = 6.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 110 SAAIAFLYCCNFSDFFGGFVTPRSRNVMAWPPLFFVGVLSDMLILLSTFP 259
SA + + CN G +V +NV AW ++ + VLS ML +++ FP
Sbjct: 448 SATVFLVLLCNDRPVLGPWVNTARQNVFAWMIVWSLVVLSLMLTVVTLFP 497
>UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family
protein; n=4; Clostridium botulinum|Rep: Helicase,
UvrD/REP/exonuclease family protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 855
Score = 33.5 bits (73), Expect = 6.9
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 562 NESVISESNVFNLVKITSLAVSNAARSCTF*LRTPVITLDNSK 690
N+ + S N+ L+KITSL+ S R T R P+IT+ +K
Sbjct: 737 NKEISSRDNLIELLKITSLSNSELDRMLTKYPRVPIITVHQAK 779
>UniRef50_A0YKJ9 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1015
Score = 33.5 bits (73), Expect = 6.9
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1
Query: 219 PTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTA 88
P KSG ++ E V +PP S K Q++ + I + +T++TT+
Sbjct: 729 PPTKSGLDVISTEETAVIEPPSTSVKHQEFDQKIPSAETVQTTS 772
>UniRef50_A0LA72 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 827
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = -2
Query: 662 VRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAE------QLLEAINT 501
+ +QNV +AA + + ++NT L + D + + + +LA+ L E N
Sbjct: 395 IASQNVHTMAAAAEQMNANIEQVNTSLRRVDDEVSTVVHAISELAQNQNQIRSLCEQANA 454
Query: 500 MQQTQRNELNNTNSILTNLASS 435
T N+ NT + + +L S
Sbjct: 455 ASTTAANQAQNTRNAMNDLTES 476
>UniRef50_Q22RF4 Cluster: Viral A-type inclusion protein repeat
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 3640
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -2
Query: 683 LSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAIN 504
L +T +NVQ+ +++ KD + L +TD + +L +D L QL + N
Sbjct: 1911 LKEDLTQEEQKNVQI-QSIQIEKDQKIQVLEEQAESLTDEITNLQGQIDILNRQLNSSYN 1969
Query: 503 TMQQTQRNELNNTN 462
T+ + Q+N+ N
Sbjct: 1970 TLSEIQKNKQTFVN 1983
>UniRef50_UPI00004D0E8C Cluster: Protein FAM81B.; n=3; Xenopus
tropicalis|Rep: Protein FAM81B. - Xenopus tropicalis
Length = 368
Score = 33.1 bits (72), Expect = 9.1
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -2
Query: 638 LAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
L L+ A+D I R+N + +EI D L ++ + + E++N++QQ Q ++N
Sbjct: 290 LNKLKHAEDKINARMNAIETEIWDELENMKSEYRAGFQSIQESLNSLQQIQETKVN 345
>UniRef50_Q6YQH0 Cluster: ATP-dependent Zn protease; n=19;
Candidatus Phytoplasma asteris|Rep: ATP-dependent Zn
protease - Onion yellows phytoplasma
Length = 786
Score = 33.1 bits (72), Expect = 9.1
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -2
Query: 644 QLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNN 468
Q+ ++T D+I T++ TL +E+T++ P L + +Q L + QQTQ+ +NN
Sbjct: 75 QINENVKTLTDII-TKIKTLQTELTNN-PQLNPTIKTQKQQQLTELKNQQQTQQTLVNN 131
>UniRef50_Q15TL3 Cluster: MscS Mechanosensitive ion channel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
MscS Mechanosensitive ion channel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1110
Score = 33.1 bits (72), Expect = 9.1
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = -2
Query: 689 LELSNVMTGVRNQ-----NVQLLAALETAKDVILTRLNTL--LSEITDSLPDLTLMLDKL 531
LEL + +T ++NQ N +LA LE +++ +TL +++ ++L L +
Sbjct: 229 LELLDALTRLQNQLDEKENASMLAQLEATTASLISAPSTLQDIAKQNEALAKKATSLTEQ 288
Query: 530 AEQLLEAINTMQQTQRNELNNTNSILTNL 444
+ + +N +Q TQ NELNN S L L
Sbjct: 289 QDATSQKLNEIQ-TQINELNNKFSSLNRL 316
>UniRef50_Q22T20 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 807
Score = 33.1 bits (72), Expect = 9.1
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = -2
Query: 614 DVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEA-INTMQQTQRNELNNTNS 459
D +++L+T +S + D D+ +++L + LEA ++T+Q T + NN N+
Sbjct: 339 DESISKLDTTISNVQDFPVDIQKRVEELVQAQLEAKLSTLQLTNQQNSNNNNN 391
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,223,091
Number of Sequences: 1657284
Number of extensions: 13380858
Number of successful extensions: 43382
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 41284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43319
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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