Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17e24
(240 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 0.61
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 0.61
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 0.61
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 0.61
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 20 3.2
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 20 3.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 20 4.3
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 20 4.3
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 4.3
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 20 4.3
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 20 4.3
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 20 4.3
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 20 4.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 20 4.3
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 20 4.3
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 20 4.3
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 20 4.3
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 19 5.7
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 19 5.7
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 19 5.7
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 19 7.5
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 19 7.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 19 7.5
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 19 7.5
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 19 7.5
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 19 9.9
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 19 9.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 19 9.9
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 19 9.9
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 19 9.9
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 19 9.9
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 0.61
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 99 IIKFIFVCFACLATINIV 152
I+ F+ VCF C + I ++
Sbjct: 954 ILFFMLVCFTCKSNIQLI 971
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 0.61
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 99 IIKFIFVCFACLATINIV 152
I+ F+ VCF C + I ++
Sbjct: 954 ILFFMLVCFTCKSNIQLI 971
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.6 bits (46), Expect = 0.61
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 99 IIKFIFVCFACLATINIV 152
I+ F+ VCF C + I ++
Sbjct: 954 ILFFMLVCFTCKSNIQLI 971
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.6 bits (46), Expect = 0.61
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 99 IIKFIFVCFACLATINIV 152
I+ F+ VCF C + I ++
Sbjct: 954 ILFFMLVCFTCKSNIQLI 971
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 20.2 bits (40), Expect = 3.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 173 ILVFHNSYDVYRCQTSKANKY 111
I + SY++Y CQT +Y
Sbjct: 188 IFLMFVSYNIYVCQTVSNFEY 208
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 20.2 bits (40), Expect = 3.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 173 ILVFHNSYDVYRCQTSKANKY 111
I + SY++Y CQT +Y
Sbjct: 114 IFLMFVSYNIYVCQTVSNFEY 134
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRI 251
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRI 251
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 250 TRYQTLELEKEFHFNRYLTRRRRI 273
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 19.8 bits (39), Expect = 4.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 178 LKFSCFTIVTMFIV 137
L+F +TIV +FI+
Sbjct: 23 LRFKLYTIVHIFII 36
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRI 251
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRI 251
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 184 TRYQTLELEKEFHFNRYLTRRRRI 207
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRI 251
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 16 TRYQTLELEKEFHFNRYLTRRRRI 39
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 252 TRYQTLELEKEFHFNRYLTRRRRI 275
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ NR+ +RRI
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRI 251
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 19.4 bits (38), Expect = 5.7
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = -2
Query: 230 LLCAENRLWP 201
+LC +LWP
Sbjct: 84 MLCGSTQLWP 93
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 19.4 bits (38), Expect = 5.7
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -2
Query: 230 LLCAENRLWP 201
+LC+E +WP
Sbjct: 70 MLCSEPAIWP 79
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 92 ESSWELPLIVSLKSEVY 42
ESS LPL+ S+ S Y
Sbjct: 221 ESSKVLPLLFSVSSSSY 237
Score = 19.0 bits (37), Expect = 7.5
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2
Query: 113 YELDYFFESSWELPLIVSLKSEVYLI 36
Y+L +++ +IVS + +Y I
Sbjct: 152 YQLSVLIDNNMSYIIIVSFATNLYFI 177
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ +NR+ +RRI
Sbjct: 241 TRHQILELEKEFHYNRYLTRRRRI 264
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ +NR+ +RRI
Sbjct: 241 TRHQILELEKEFHYNRYLTRRRRI 264
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 19.0 bits (37), Expect = 7.5
Identities = 5/15 (33%), Positives = 12/15 (80%)
Frame = +2
Query: 83 MSFQRNNQVHICLLC 127
+ +QR+++ ++ LLC
Sbjct: 240 LGYQRHSKQNVALLC 254
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 166 TRISNLEF*QQKGHNRFSAHKRRI 237
TR LE ++ +NR+ +RRI
Sbjct: 241 TRHQILELEKEFHYNRYLTRRRRI 264
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = -2
Query: 92 ESSWELPLIVSLKSEVYLIWKYQRRI 15
+ WEL ++L IW RR+
Sbjct: 271 QKRWELARNLNLTERQVKIWFQNRRM 296
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +3
Query: 6 VTGNSSLIFPNQID 47
VTG+ S ++P+ +D
Sbjct: 216 VTGHHSGLYPSAVD 229
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 99 IIKFIFVCFACL 134
+ K +FV FAC+
Sbjct: 1 MFKVLFVVFACV 12
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 18.6 bits (36), Expect = 9.9
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -2
Query: 194 CQNSRFEILVFHN 156
CQ+ +FE V+++
Sbjct: 345 CQDEKFESFVYYH 357
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3
Query: 114 FVCFACLATINIV 152
++C C ATI V
Sbjct: 1011 YICHVCYATIQEV 1023
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3
Query: 114 FVCFACLATINIV 152
++C C ATI V
Sbjct: 292 YICHVCYATIQEV 304
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 226 CVPKIDYGLFVVKIR 182
C KID LFV IR
Sbjct: 640 CGNKIDTSLFVDHIR 654
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,631
Number of Sequences: 336
Number of extensions: 1034
Number of successful extensions: 32
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used: 3535257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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