Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17e23
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY458845-1|AAS13443.1|  593|Homo sapiens KRAB-domain-containing ...    32   2.5  
BC108912-1|AAI08913.1|  706|Homo sapiens zinc finger protein 225...    31   4.4  
AK223477-1|BAD97197.1|  706|Homo sapiens zinc finger protein 225...    31   4.4  
AF187991-1|AAF04107.1|  706|Homo sapiens zinc finger protein ZNF...    31   4.4  
AC074331-1|AAF88105.1|  628|Homo sapiens ZNF225 [amino acids 79-...    31   4.4  
AC021092-2|AAF24967.1|  706|Homo sapiens ZNF225 protein.               31   4.4  

>AY458845-1|AAS13443.1|  593|Homo sapiens KRAB-domain-containing
           zinc finger protein protein.
          Length = 593

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 123 SHQRLFSRLKSFECKXC*NKKVSPLCLQFQE 31
           +HQRL SR K F+C+ C        CLQ Q+
Sbjct: 528 THQRLHSREKLFQCEDCGKSSEHSSCLQDQQ 558


>BC108912-1|AAI08913.1|  706|Homo sapiens zinc finger protein 225
           protein.
          Length = 706

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 123 SHQRLFSRLKSFECKXC*NKKVSPLCLQFQER 28
           +HQRL SR K  +C+ C    V   CL+ Q+R
Sbjct: 641 THQRLHSREKLLQCEDCGKSIVHSSCLKDQQR 672


>AK223477-1|BAD97197.1|  706|Homo sapiens zinc finger protein 225
           variant protein.
          Length = 706

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 123 SHQRLFSRLKSFECKXC*NKKVSPLCLQFQER 28
           +HQRL SR K  +C+ C    V   CL+ Q+R
Sbjct: 641 THQRLHSREKLLQCEDCGKSIVHSSCLKDQQR 672


>AF187991-1|AAF04107.1|  706|Homo sapiens zinc finger protein ZNF225
           protein.
          Length = 706

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 123 SHQRLFSRLKSFECKXC*NKKVSPLCLQFQER 28
           +HQRL SR K  +C+ C    V   CL+ Q+R
Sbjct: 641 THQRLHSREKLLQCEDCGKSIVHSSCLKDQQR 672


>AC074331-1|AAF88105.1|  628|Homo sapiens ZNF225 [amino acids
           79-706] protein.
          Length = 628

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 123 SHQRLFSRLKSFECKXC*NKKVSPLCLQFQER 28
           +HQRL SR K  +C+ C    V   CL+ Q+R
Sbjct: 563 THQRLHSREKLLQCEDCGKSIVHSSCLKDQQR 594


>AC021092-2|AAF24967.1|  706|Homo sapiens ZNF225 protein.
          Length = 706

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 123 SHQRLFSRLKSFECKXC*NKKVSPLCLQFQER 28
           +HQRL SR K  +C+ C    V   CL+ Q+R
Sbjct: 641 THQRLHSREKLLQCEDCGKSIVHSSCLKDQQR 672


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,815,573
Number of Sequences: 237096
Number of extensions: 1610868
Number of successful extensions: 6369
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)