Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17e22
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ356012-1|ABC86955.1| 818|Homo sapiens ZNF438 transcript varia... 33 1.8
DQ356011-1|ABC86954.1| 818|Homo sapiens ZNF438 transcript varia... 33 1.8
BC104757-1|AAI04758.1| 828|Homo sapiens zinc finger protein 438... 33 1.8
BC101622-1|AAI01623.1| 828|Homo sapiens ZNF438 transcript varia... 33 1.8
AL359532-3|CAM17193.1| 828|Homo sapiens zinc finger protein 438... 33 1.8
AL359532-2|CAI13438.1| 818|Homo sapiens zinc finger protein 438... 33 1.8
AL359532-1|CAI13437.1| 392|Homo sapiens zinc finger protein 438... 33 1.8
AK131357-1|BAD18510.1| 779|Homo sapiens protein ( Homo sapiens ... 33 1.8
AF440405-1|AAP97319.1| 392|Homo sapiens unknown protein. 33 1.8
AF428258-1|AAP97298.1| 828|Homo sapiens hypothetical protein pr... 33 1.8
BC052282-1|AAH52282.1| 541|Homo sapiens zinc finger protein 513... 31 5.5
BC040650-1|AAH40650.1| 378|Homo sapiens ZNF513 protein protein. 31 5.5
AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated prote... 31 5.5
AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kin... 31 5.5
AK096933-1|BAC04903.1| 479|Homo sapiens protein ( Homo sapiens ... 31 5.5
AK056765-1|BAB71274.1| 373|Homo sapiens protein ( Homo sapiens ... 31 5.5
AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK... 31 5.5
AC074117-6|AAY14845.1| 541|Homo sapiens unknown protein. 31 5.5
AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein. 31 5.5
AB075875-1|BAD38657.1| 479|Homo sapiens putative protein produc... 31 5.5
AB014587-1|BAA31662.1| 1175|Homo sapiens KIAA0687 protein protein. 31 5.5
AB013385-1|BAA33714.1| 543|Homo sapiens NIK protein. 31 5.5
BX537768-1|CAD97831.1| 956|Homo sapiens hypothetical protein pr... 30 9.5
AB033075-1|BAA86563.1| 949|Homo sapiens KIAA1249 protein protein. 30 9.5
>DQ356012-1|ABC86955.1| 818|Homo sapiens ZNF438 transcript variant
3 protein.
Length = 818
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 694 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 729
>DQ356011-1|ABC86954.1| 818|Homo sapiens ZNF438 transcript variant
2 protein.
Length = 818
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 694 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 729
>BC104757-1|AAI04758.1| 828|Homo sapiens zinc finger protein 438
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>BC101622-1|AAI01623.1| 828|Homo sapiens ZNF438 transcript variant
3 protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>AL359532-3|CAM17193.1| 828|Homo sapiens zinc finger protein 438
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>AL359532-2|CAI13438.1| 818|Homo sapiens zinc finger protein 438
protein.
Length = 818
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 694 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 729
>AL359532-1|CAI13437.1| 392|Homo sapiens zinc finger protein 438
protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 268 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 303
>AK131357-1|BAD18510.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ16387 fis, clone TRACH2007483, weakly similar
to GASTRULA ZINC FINGER PROTEIN XLCGF7.1. ).
Length = 779
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 655 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 690
>AF440405-1|AAP97319.1| 392|Homo sapiens unknown protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 268 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 303
>AF428258-1|AAP97298.1| 828|Homo sapiens hypothetical protein
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 498
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>BC052282-1|AAH52282.1| 541|Homo sapiens zinc finger protein 513
protein.
Length = 541
Score = 31.1 bits (67), Expect = 5.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 530 RCCR-QYSPIQILNITDTTQLNSRDAKSGRIRI*PY-CSKNKREVKHRRAHLNLKNGK*S 703
RC R Y+ Q++N+T T+ ++ + K R P+ CS +H+R H G +
Sbjct: 179 RCGRCPYASAQLVNLTRHTRTHTGE-KPYRCPHCPFACSSLGNLRRHQRTHA----GPPT 233
Query: 704 TVVPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPSTXHILISKKRLHV 844
PT + + P PP P + P+ P +L+ LHV
Sbjct: 234 PPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDA--LLLPDLSLHV 278
>BC040650-1|AAH40650.1| 378|Homo sapiens ZNF513 protein protein.
Length = 378
Score = 31.1 bits (67), Expect = 5.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 530 RCCR-QYSPIQILNITDTTQLNSRDAKSGRIRI*PY-CSKNKREVKHRRAHLNLKNGK*S 703
RC R Y+ Q++N+T T+ ++ + K R P+ CS +H+R H G +
Sbjct: 16 RCGRCPYASAQLVNLTRHTRTHTGE-KPYRCPHCPFACSSLGNLRRHQRTHA----GPPT 70
Query: 704 TVVPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPSTXHILISKKRLHV 844
PT + + P PP P + P+ P +L+ LHV
Sbjct: 71 PPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDA--LLLPDLSLHV 115
>AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated protein
kinase kinase kinase kinase 4 isoform protein.
Length = 1042
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
+R EA+ +D + G+ V NP N RP++ I+ + + LC A + +LV T
Sbjct: 689 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 748
Query: 62 GLVL 51
GL+L
Sbjct: 749 GLML 752
>AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kinase
HGK protein.
Length = 1239
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
+R EA+ +D + G+ V NP N RP++ I+ + + LC A + +LV T
Sbjct: 886 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 945
Query: 62 GLVL 51
GL+L
Sbjct: 946 GLML 949
>AK096933-1|BAC04903.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ39614 fis, clone SMINT2000176, weakly similar to
ZINC FINGER PROTEIN 83. ).
Length = 479
Score = 31.1 bits (67), Expect = 5.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 530 RCCR-QYSPIQILNITDTTQLNSRDAKSGRIRI*PY-CSKNKREVKHRRAHLNLKNGK*S 703
RC R Y+ Q++N+T T+ ++ + K R P+ CS +H+R H G +
Sbjct: 117 RCGRCPYASAQLVNLTRHTRTHTGE-KPYRCPHCPFACSSLGNLRRHQRTHA----GPPT 171
Query: 704 TVVPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPSTXHILISKKRLHV 844
PT + + P PP P + P+ P +L+ LHV
Sbjct: 172 PPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDA--LLLPDLSLHV 216
>AK056765-1|BAB71274.1| 373|Homo sapiens protein ( Homo sapiens
cDNA FLJ32203 fis, clone PLACE6003038, weakly similar to
ZINC FINGER PROTEIN 84. ).
Length = 373
Score = 31.1 bits (67), Expect = 5.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 530 RCCR-QYSPIQILNITDTTQLNSRDAKSGRIRI*PY-CSKNKREVKHRRAHLNLKNGK*S 703
RC R Y+ Q++N+T T+ ++ + K R P+ CS +H+R H G +
Sbjct: 11 RCGRCPYASAQLVNLTRHTRTHTGE-KPYRCPHCPFACSSLGNLRRHQRTHA----GPPT 65
Query: 704 TVVPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPSTXHILISKKRLHV 844
PT + + P PP P + P+ P +L+ LHV
Sbjct: 66 PPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDA--LLLPDLSLHV 110
>AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK
protein.
Length = 1165
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
+R EA+ +D + G+ V NP N RP++ I+ + + LC A + +LV T
Sbjct: 804 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 863
Query: 62 GLVL 51
GL+L
Sbjct: 864 GLML 867
>AC074117-6|AAY14845.1| 541|Homo sapiens unknown protein.
Length = 541
Score = 31.1 bits (67), Expect = 5.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 530 RCCR-QYSPIQILNITDTTQLNSRDAKSGRIRI*PY-CSKNKREVKHRRAHLNLKNGK*S 703
RC R Y+ Q++N+T T+ ++ + K R P+ CS +H+R H G +
Sbjct: 179 RCGRCPYASAQLVNLTRHTRTHTGE-KPYRCPHCPFACSSLGNLRRHQRTHA----GPPT 233
Query: 704 TVVPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPSTXHILISKKRLHV 844
PT + + P PP P + P+ P +L+ LHV
Sbjct: 234 PPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDA--LLLPDLSLHV 278
>AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein.
Length = 1260
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
+R EA+ +D + G+ V NP N RP++ I+ + + LC A + +LV T
Sbjct: 907 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 966
Query: 62 GLVL 51
GL+L
Sbjct: 967 GLML 970
>AB075875-1|BAD38657.1| 479|Homo sapiens putative protein product
of HMFT0656 protein.
Length = 479
Score = 31.1 bits (67), Expect = 5.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 530 RCCR-QYSPIQILNITDTTQLNSRDAKSGRIRI*PY-CSKNKREVKHRRAHLNLKNGK*S 703
RC R Y+ Q++N+T T+ ++ + K R P+ CS +H+R H G +
Sbjct: 117 RCGRCPYASAQLVNLTRHTRTHTGE-KPYRCPHCPFACSSLGNLRRHQRTHA----GPPT 171
Query: 704 TVVPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPSTXHILISKKRLHV 844
PT + + P PP P + P+ P +L+ LHV
Sbjct: 172 PPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDA--LLLPDLSLHV 216
>AB014587-1|BAA31662.1| 1175|Homo sapiens KIAA0687 protein protein.
Length = 1175
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
+R EA+ +D + G+ V NP N RP++ I+ + + LC A + +LV T
Sbjct: 822 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 881
Query: 62 GLVL 51
GL+L
Sbjct: 882 GLML 885
>AB013385-1|BAA33714.1| 543|Homo sapiens NIK protein.
Length = 543
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
+R EA+ +D + G+ V NP N RP++ I+ + + LC A + +LV T
Sbjct: 190 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 249
Query: 62 GLVL 51
GL+L
Sbjct: 250 GLML 253
>BX537768-1|CAD97831.1| 956|Homo sapiens hypothetical protein
protein.
Length = 956
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 710 VPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPST 808
V TST S + PP P + K P PPST
Sbjct: 603 VSTSTDSPTSPTTEAPPLPPRNAGKGPTGPPST 635
>AB033075-1|BAA86563.1| 949|Homo sapiens KIAA1249 protein protein.
Length = 949
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 710 VPTSTSKMGSKAPKCPPQPQKMGSKAPKCPPST 808
V TST S + PP P + K P PPST
Sbjct: 596 VSTSTDSPTSPTTEAPPLPPRNAGKGPTGPPST 628
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,287,905
Number of Sequences: 237096
Number of extensions: 3159537
Number of successful extensions: 8701
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8667
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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