Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17e19
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 37 0.10
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 37 0.10
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 37 0.10
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 37 0.10
BC028423-1|AAH28423.1| 1022|Homo sapiens PMFBP1 protein protein. 34 0.56
AK093285-1|BAC04121.1| 797|Homo sapiens protein ( Homo sapiens ... 34 0.56
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 33 1.3
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 33 1.3
AL834464-1|CAD39123.1| 236|Homo sapiens hypothetical protein pr... 33 1.3
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 33 1.3
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 33 1.3
BC115701-1|AAI15702.1| 828|Homo sapiens SLMAP protein protein. 33 1.7
BC114627-1|AAI14628.1| 790|Homo sapiens SLMAP protein protein. 33 1.7
AF304450-1|AAG41949.1| 359|Homo sapiens sarcolemmal associated ... 33 1.7
AB046821-1|BAB13427.1| 690|Homo sapiens KIAA1601 protein protein. 33 1.7
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 32 3.0
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 36.7 bits (81), Expect = 0.10
Identities = 26/87 (29%), Positives = 52/87 (59%)
Frame = -3
Query: 551 WRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 372
W+++ E++ K+ +++ + K+++ +AK + +M LN+M +E ++ K+ HK
Sbjct: 448 WKEQAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKM----KEKLE-KETTEHK 502
Query: 371 KDELLQVKDTQVSNLIAKMIDLSDRAV 291
QVK QV++L A++ +LS RAV
Sbjct: 503 -----QVKQ-QVADLTAQLHELSRRAV 523
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 36.7 bits (81), Expect = 0.10
Identities = 26/87 (29%), Positives = 52/87 (59%)
Frame = -3
Query: 551 WRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 372
W+++ E++ K+ +++ + K+++ +AK + +M LN+M +E ++ K+ HK
Sbjct: 448 WKEQAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKM----KEKLE-KETTEHK 502
Query: 371 KDELLQVKDTQVSNLIAKMIDLSDRAV 291
QVK QV++L A++ +LS RAV
Sbjct: 503 -----QVKQ-QVADLTAQLHELSRRAV 523
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 36.7 bits (81), Expect = 0.10
Identities = 26/87 (29%), Positives = 52/87 (59%)
Frame = -3
Query: 551 WRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 372
W+++ E++ K+ +++ + K+++ +AK + +M LN+M +E ++ K+ HK
Sbjct: 42 WKEQAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKM----KEKLE-KETTEHK 96
Query: 371 KDELLQVKDTQVSNLIAKMIDLSDRAV 291
QVK QV++L A++ +LS RAV
Sbjct: 97 -----QVKQ-QVADLTAQLHELSRRAV 117
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 36.7 bits (81), Expect = 0.10
Identities = 26/87 (29%), Positives = 52/87 (59%)
Frame = -3
Query: 551 WRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 372
W+++ E++ K+ +++ + K+++ +AK + +M LN+M +E ++ K+ HK
Sbjct: 455 WKEQAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKM----KEKLE-KETTEHK 509
Query: 371 KDELLQVKDTQVSNLIAKMIDLSDRAV 291
QVK QV++L A++ +LS RAV
Sbjct: 510 -----QVKQ-QVADLTAQLHELSRRAV 530
>BC028423-1|AAH28423.1| 1022|Homo sapiens PMFBP1 protein protein.
Length = 1022
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -3
Query: 476 IEAKDLQVTRVMTDLNRMYTGFQETMQ---RKDEMMHKKDELLQ---VKDTQVSNLIAK 318
IE KD +T + L + F ET + +KD+ + +KDE+LQ K TQV N + K
Sbjct: 368 IERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLK 426
>AK093285-1|BAC04121.1| 797|Homo sapiens protein ( Homo sapiens
cDNA FLJ35966 fis, clone TESTI2012628, moderately
similar to Mus musculus STAP mRNA for sperm tail
associated protein. ).
Length = 797
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -3
Query: 476 IEAKDLQVTRVMTDLNRMYTGFQETMQ---RKDEMMHKKDELLQ---VKDTQVSNLIAK 318
IE KD +T + L + F ET + +KD+ + +KDE+LQ K TQV N + K
Sbjct: 368 IERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLK 426
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -3
Query: 509 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 339
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 338 VSNLIAKMIDLSDRAVQYPADKRKH 264
V +L ++ D + + A R H
Sbjct: 1363 VKSLEQQLADADRQHQEVIAIYRTH 1387
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -3
Query: 509 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 339
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 338 VSNLIAKMIDLSDRAVQYPADKRKH 264
V +L ++ D + + A R H
Sbjct: 1363 VKSLEQQLADADRQHQEVIAIYRTH 1387
>AL834464-1|CAD39123.1| 236|Homo sapiens hypothetical protein
protein.
Length = 236
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -3
Query: 509 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 339
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 123 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 182
Query: 338 VSNLIAKMIDLSDRAVQYPADKRKH 264
V +L ++ D + + A R H
Sbjct: 183 VKSLEQQLADADRQHQEVIAIYRTH 207
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -3
Query: 509 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 339
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 338 VSNLIAKMIDLSDRAVQYPADKRKH 264
V +L ++ D + + A R H
Sbjct: 1363 VKSLEQQLADADRQHQEVIAIYRTH 1387
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -3
Query: 509 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 339
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 338 VSNLIAKMIDLSDRAVQYPADKRKH 264
V +L ++ D + + A R H
Sbjct: 1363 VKSLEQQLADADRQHQEVIAIYRTH 1387
>BC115701-1|AAI15702.1| 828|Homo sapiens SLMAP protein protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 593 LRHLPSTQTRCKRWWRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTG 414
++HL + R ++ F+ Q +E Q+E Q+ + L R++
Sbjct: 499 IQHLRKELIEAQELARTSKQKCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLHID 558
Query: 413 FQETMQRKD-EMMHKKDELLQVKD 345
+ + KD E+ +DELL +D
Sbjct: 559 TENLREEKDSEITSTRDELLSARD 582
>BC114627-1|AAI14628.1| 790|Homo sapiens SLMAP protein protein.
Length = 790
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 593 LRHLPSTQTRCKRWWRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTG 414
++HL + R ++ F+ Q +E Q+E Q+ + L R++
Sbjct: 461 IQHLRKELIEAQELARTSKQKCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLHID 520
Query: 413 FQETMQRKD-EMMHKKDELLQVKD 345
+ + KD E+ +DELL +D
Sbjct: 521 TENLREEKDSEITSTRDELLSARD 544
>AF304450-1|AAG41949.1| 359|Homo sapiens sarcolemmal associated
protein 1 protein.
Length = 359
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 593 LRHLPSTQTRCKRWWRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTG 414
++HL + R ++ F+ Q +E Q+E Q+ + L R++
Sbjct: 33 IQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLHID 92
Query: 413 FQETMQRKD-EMMHKKDELLQVKD 345
+ + KD E+ +DELL +D
Sbjct: 93 TENLREEKDSEITSTRDELLSARD 116
>AB046821-1|BAB13427.1| 690|Homo sapiens KIAA1601 protein protein.
Length = 690
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 593 LRHLPSTQTRCKRWWRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTG 414
++HL + R ++ F+ Q +E Q+E Q+ + L R++
Sbjct: 361 IQHLRKELIEAQELARTSKQKCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLHID 420
Query: 413 FQETMQRKD-EMMHKKDELLQVKD 345
+ + KD E+ +DELL +D
Sbjct: 421 TENLREEKDSEITSTRDELLSARD 444
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 31.9 bits (69), Expect = 3.0
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = -3
Query: 590 RHLPSTQTRCKRWWRKKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGF 411
RH+ Q W +KK EE+ +E +II + Q + ++ ++ +V + +
Sbjct: 243 RHIEEFQKEQALWRKKKREEM---EEENRKIIEFANMQQQREEDRMAKVQENEEKRLQLQ 299
Query: 410 QETMQRKDEMMHKKDELLQVK 348
Q+ +EM+ ++++L QV+
Sbjct: 300 NALTQKLEEMLRQREDLEQVR 320
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,266,967
Number of Sequences: 237096
Number of extensions: 2298057
Number of successful extensions: 6549
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6541
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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