Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17e18
(744 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 31 0.050
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.066
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 27 0.61
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 27 0.81
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 2.5
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 25 2.5
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 24 5.7
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 5.7
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 5.7
L10441-1|AAA29361.1| 154|Anopheles gambiae transposase protein. 23 7.5
L10438-1|AAA29359.1| 154|Anopheles gambiae transposase protein. 23 7.5
AY825668-1|AAV70231.1| 168|Anopheles gambiae olfactory receptor... 23 7.5
AY825667-1|AAV70230.1| 168|Anopheles gambiae olfactory receptor... 23 7.5
AY825664-1|AAV70227.1| 167|Anopheles gambiae olfactory receptor... 23 7.5
AY825663-1|AAV70226.1| 167|Anopheles gambiae olfactory receptor... 23 7.5
AY825650-1|AAV70213.1| 167|Anopheles gambiae olfactory receptor... 23 7.5
AY825649-1|AAV70212.1| 167|Anopheles gambiae olfactory receptor... 23 7.5
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 23 7.5
DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein. 23 10.0
AY825674-1|AAV70237.1| 168|Anopheles gambiae olfactory receptor... 23 10.0
AY825673-1|AAV70236.1| 168|Anopheles gambiae olfactory receptor... 23 10.0
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 30.7 bits (66), Expect = 0.050
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -2
Query: 161 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELYTIE 9
++E ++ EL+ DLQEQL K +++ K + E++ EL A L ++
Sbjct: 642 IKELQERCAELREQKRDLQEQLSK-YQQTKMKVKRQEQKCKELTARLVNVD 691
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.066
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2
Query: 173 ANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 33
++R++E+ + QE+Q+ +N LQEQ + A Q ++ +++ EL
Sbjct: 768 SSREIEQMQIRAQEIQTQINYLQEQQGELEATIQRLTAKLKQQEMEL 814
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 27.1 bits (57), Expect = 0.61
Identities = 12/55 (21%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 200 KITELKLKWANR-DLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNS 39
++ +L W NR D+++ ++ Q+ + + + EQ+++++ + + + FER S
Sbjct: 878 EVEQLVTLWKNRNDVQKSFREKQDQLARMREHYEQIQRELKDKLKRPTPFERMRS 932
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.6 bits (56), Expect = 0.81
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = -2
Query: 191 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQF---ERRNSELVAEL 21
E +L+ E +K +E +N L+EQ RK++ Q + SQF E R+ + EL
Sbjct: 341 EKELEQVRPRYEAMRRKEEECSRELN-LKEQKRKELYAKQGRGSQFSSKEERDKWIQGEL 399
Query: 20 YTI 12
++
Sbjct: 400 KSL 402
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = -2
Query: 170 NRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELYTIEM 6
++D+ ++ ELQS +++++EQL + K R+ + V EL+ +E+
Sbjct: 470 SQDVGTSKERIHELQSELDNVREQLGDAKID---KHEDARRKKKQEVVELFKLEV 521
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 25.0 bits (52), Expect = 2.5
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 91 LRNCSCRSFT 120
+RNCSCRS+T
Sbjct: 48 MRNCSCRSYT 57
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 23.8 bits (49), Expect = 5.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 258 LAVLGSQLGPFSFQSLHI 311
LAV+G G SFQ +H+
Sbjct: 77 LAVMGLNTGQLSFQDIHL 94
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 5.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 389 YE*GLRA*ILHTRAYCTRENLMN*RCKNICT 481
YE LR L Y TR L+ C+N C+
Sbjct: 1407 YEHRLREEALQRELYATRLALLKKTCQNCCS 1437
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 5.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 389 YE*GLRA*ILHTRAYCTRENLMN*RCKNICT 481
YE LR L Y TR L+ C+N C+
Sbjct: 1404 YEHRLREEALQRELYATRLALLKKTCQNCCS 1434
>L10441-1|AAA29361.1| 154|Anopheles gambiae transposase protein.
Length = 154
Score = 23.4 bits (48), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 104 EQLRKQVAESQAKFSQFERRNSELVAELYTIE 9
+Q +++V SQ FER NSE + T++
Sbjct: 3 DQKQQRVDYSQQCLELFERNNSEFLRRYVTMD 34
>L10438-1|AAA29359.1| 154|Anopheles gambiae transposase protein.
Length = 154
Score = 23.4 bits (48), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 104 EQLRKQVAESQAKFSQFERRNSELVAELYTIE 9
+Q +++V SQ FER NSE + T++
Sbjct: 3 DQKQQRVDYSQQCLELFERNNSEFLRRYVTMD 34
>AY825668-1|AAV70231.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 149 PLTMKKNQSSVREKWVQL 166
>AY825667-1|AAV70230.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 149 PLTMKKNQSSVREKWVQL 166
>AY825664-1|AAV70227.1| 167|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 167
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 148 PLTMKKNQSSVREKWVQL 165
>AY825663-1|AAV70226.1| 167|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 167
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 148 PLTMKKNQSSVREKWVQL 165
>AY825650-1|AAV70213.1| 167|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 167
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 148 PLTMKKNQSSVREKWVQL 165
>AY825649-1|AAV70212.1| 167|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 167
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 148 PLTMKKNQSSVREKWVQL 165
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 23.4 bits (48), Expect = 7.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 312 RCGAIGKRTVRAASQEQPS*T 250
RCG IG++T+ + EQ + T
Sbjct: 66 RCGEIGRKTLVCCASEQQTRT 86
>DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein.
Length = 409
Score = 23.0 bits (47), Expect = 10.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 389 NRDSIKQHWRELLENNTVNNRIIDLN 312
N D + ++++LLE+ +N+ DLN
Sbjct: 94 NIDHTRSYYKQLLESAQQDNKDYDLN 119
>AY825674-1|AAV70237.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 23.0 bits (47), Expect = 10.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 149 PLTMKKNQSSLREKWVQL 166
>AY825673-1|AAV70236.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 23.0 bits (47), Expect = 10.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 407 PLTLIRNRDSIKQHWREL 354
PLT+ +N+ S+++ W +L
Sbjct: 149 PLTMKKNQSSLREKWVQL 166
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,599
Number of Sequences: 2352
Number of extensions: 12153
Number of successful extensions: 74
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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