Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17e11
(413 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 29 4.6
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 29 4.6
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 29 4.6
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 29 4.6
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 29 4.6
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 29 4.6
Z98884-1|CAI21433.1| 1673|Homo sapiens calmodulin binding transc... 29 6.1
Z98052-1|CAI21596.1| 1673|Homo sapiens calmodulin binding transc... 29 6.1
Z97635-1|CAI20961.1| 1673|Homo sapiens calmodulin binding transc... 29 6.1
BC051341-1|AAH51341.1| 636|Homo sapiens CAMTA1 protein protein. 29 6.1
AL596210-1|CAI17064.1| 1673|Homo sapiens calmodulin binding tran... 29 6.1
AL590128-1|CAH72347.1| 1673|Homo sapiens calmodulin binding tran... 29 6.1
AL365194-1|CAI21790.1| 1673|Homo sapiens calmodulin binding tran... 29 6.1
AL359881-1|CAH72663.1| 1673|Homo sapiens calmodulin binding tran... 29 6.1
AB020640-1|BAA74856.3| 1734|Homo sapiens KIAA0833 protein protein. 29 6.1
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKMNESRSWFFERINKIDR 375
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 KNEERLTIAKKNEEFYWISGEIKDVDASQVIQKYNRFKHHMFV-ISKVNR 173
K E+ + A + +E I E+K+++ + +QK N + F I+K++R
Sbjct: 326 KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDR 375
>Z98884-1|CAI21433.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>Z98052-1|CAI21596.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>Z97635-1|CAI20961.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>BC051341-1|AAH51341.1| 636|Homo sapiens CAMTA1 protein protein.
Length = 636
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 354 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 413
Query: 226 QKYN 215
YN
Sbjct: 414 SAYN 417
>AL596210-1|CAI17064.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>AL590128-1|CAH72347.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>AL365194-1|CAI21790.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>AL359881-1|CAH72663.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1398 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1457
Query: 226 QKYN 215
YN
Sbjct: 1458 SAYN 1461
>AB020640-1|BAA74856.3| 1734|Homo sapiens KIAA0833 protein protein.
Length = 1734
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 394 MHIVEQYLTQNVDNVKGHNFIVLSFKNEERLTIAKKNEEFYWISGEIKDVD----ASQVI 227
M + E + D +K NF+ + ER A + W++ + D D A+Q+
Sbjct: 1459 MTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIR 1518
Query: 226 QKYN 215
YN
Sbjct: 1519 SAYN 1522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,678,027
Number of Sequences: 237096
Number of extensions: 726135
Number of successful extensions: 1367
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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