Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17e08
(872 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA... 31 2.1
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA... 30 3.6
BT029978-1|ABM92852.1| 178|Drosophila melanogaster IP18377p pro... 30 4.8
BT029974-1|ABM92848.1| 178|Drosophila melanogaster IP18177p pro... 30 4.8
BT029969-1|ABM92843.1| 178|Drosophila melanogaster IP18077p pro... 30 4.8
AY060643-1|AAL28191.1| 927|Drosophila melanogaster GH07390p pro... 30 4.8
AE014297-4363|AAN14168.1| 927|Drosophila melanogaster CG31445-P... 30 4.8
AE013599-3447|AAF46888.2| 464|Drosophila melanogaster CG30259-P... 30 4.8
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 8.4
>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
protein.
Length = 1489
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 722 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 546
E P + ++ ESD+ +R L+ ++ + R R H +K + + E S D +
Sbjct: 1287 EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDEAEKSGSDHEE 1346
Query: 545 EGSNKVGT 522
EG +GT
Sbjct: 1347 EGETTIGT 1354
>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
protein.
Length = 2346
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 275 REVRELRKSNCTLVYTKNEAAQQV-LLENNFTAINADQTAYLKNYKSYRE 129
+EVREL SNC L+ T +Q+ LL N T + K+Y +
Sbjct: 700 KEVRELTSSNCKLMNTTEFQKEQIELLHKNIGTYKQQVTTLEERTKNYEK 749
>BT029978-1|ABM92852.1| 178|Drosophila melanogaster IP18377p
protein.
Length = 178
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 722 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 546
E P + ++ ESD+ +R L+ ++ + R R H +K + + + S D +
Sbjct: 41 EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDDAEKSGSDHEE 100
Query: 545 EGSNKVGT 522
EG +GT
Sbjct: 101 EGETTIGT 108
>BT029974-1|ABM92848.1| 178|Drosophila melanogaster IP18177p
protein.
Length = 178
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 722 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 546
E P + ++ ESD+ +R L+ ++ + R R H +K + + + S D +
Sbjct: 41 EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDDAEKSGSDHEE 100
Query: 545 EGSNKVGT 522
EG +GT
Sbjct: 101 EGETTIGT 108
>BT029969-1|ABM92843.1| 178|Drosophila melanogaster IP18077p
protein.
Length = 178
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 722 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 546
E P + ++ ESD+ +R L+ ++ + R R H +K + + + S D +
Sbjct: 41 EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDDAEKSGSDHEE 100
Query: 545 EGSNKVGT 522
EG +GT
Sbjct: 101 EGETTIGT 108
>AY060643-1|AAL28191.1| 927|Drosophila melanogaster GH07390p
protein.
Length = 927
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Frame = +2
Query: 680 IPPIRCSAL-NWATPRLRNLNLM----HSSXRDKSVRANDQ*HDFPHDWF 814
+P A+ NW + R L+ HSS DK AN H+ H WF
Sbjct: 295 VPDFSAGAMENWGLVKYRESTLLYSPTHSSLADKQDLANVIAHELAHQWF 344
>AE014297-4363|AAN14168.1| 927|Drosophila melanogaster CG31445-PA
protein.
Length = 927
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Frame = +2
Query: 680 IPPIRCSAL-NWATPRLRNLNLM----HSSXRDKSVRANDQ*HDFPHDWF 814
+P A+ NW + R L+ HSS DK AN H+ H WF
Sbjct: 295 VPDFSAGAMENWGLVKYRESTLLYSPTHSSLADKQDLANVIAHELAHQWF 344
>AE013599-3447|AAF46888.2| 464|Drosophila melanogaster CG30259-PA
protein.
Length = 464
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 737 LNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSI 561
+N++ L Q +E+ EN +L +L + V NL IA+G N Y+A +P S+
Sbjct: 339 VNNVAVDVACLKQQKRRLEA-ENSQLKTQLQDYLV-NLNIANGSNSHVHSYLARRPKSM 395
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 227 SCTPECSWICAIRAPLV----RTAAPCWGRSSTQSCCRLR--IATCHCPLQF 364
+C PEC+ + L R A PC G + + C +R + +C CP+ +
Sbjct: 16294 NCRPECTQSSECLSSLACINQRCADPCPGSCAYNAICHVRNHVPSCQCPVGY 16345
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,786,004
Number of Sequences: 53049
Number of extensions: 777608
Number of successful extensions: 1834
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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