Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17d24
         (141 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   2.3  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    21   5.3  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    21   5.3  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    21   5.3  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    20   9.2  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    20   9.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    20   9.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 75   YTPTIGRTYVYDNKY 119
            + PTI RTY  D +Y
Sbjct: 2059 FVPTINRTYSIDYEY 2073


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  QYTPTIGRTYVYDNKY 119
           QY P + R YV  N Y
Sbjct: 226 QYGPNLDRIYVQCNNY 241


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  QYTPTIGRTYVYDNKY 119
           QY P + R YV  N Y
Sbjct: 210 QYGPNLDRIYVQCNNY 225


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  QYTPTIGRTYVYDNKY 119
           QY P + R YV  N Y
Sbjct: 226 QYGPNLDRIYVQCNNY 241


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 102 VYDNKYYKNLGC 137
           +Y+N YY N  C
Sbjct: 158 IYNNNYYYNYYC 169


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 46  FFNTKLXRKSLKY 8
           FFNTKL + S  Y
Sbjct: 64  FFNTKLKKLSSSY 76


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 111  CRTRKYARWWGCIE 70
            C+  KY R  GC++
Sbjct: 1019 CKENKYDRHQGCLD 1032


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,329
Number of Sequences: 2352
Number of extensions: 1756
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 26
effective length of database: 502,827
effective search space used: 10056540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)