Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17d18
         (325 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    29   0.058
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   2.2  
AY341167-1|AAR13731.1|  192|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AY341166-1|AAR13730.1|  192|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AY341165-1|AAR13729.1|  192|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AY341164-1|AAR13728.1|  192|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AY341163-1|AAR13727.1|  192|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AY341162-1|AAR13726.1|  192|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    22   6.6  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    22   6.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   6.6  

>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 28.7 bits (61), Expect = 0.058
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +3

Query: 72  LPCVTDQQCRDNCVISSAASELT--CQDGFCNATN---ALLNAQ 188
           LP V DQQCRD   IS+     T    +G CN  +   A+LN Q
Sbjct: 191 LPVVADQQCRDPTGISTGLICFTSPVNNGACNGDSGGPAILNNQ 234


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +3

Query: 108 CVISSAASELTCQDGFCNATNALLNAQAPDLIECD 212
           CV+++    + C    C A N L   + P+    D
Sbjct: 89  CVVNNIKHIIVCGHSDCKAMNLLYKLKDPEFASLD 123


>AY341167-1|AAR13731.1|  192|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 172 LRFDENENIETNGGGS 187


>AY341166-1|AAR13730.1|  192|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 172 LRFDENENIETNGGGS 187


>AY341165-1|AAR13729.1|  192|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 172 LRFDENENIETNGGGS 187


>AY341164-1|AAR13728.1|  192|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 172 LRFDENENIETNGGGS 187


>AY341163-1|AAR13727.1|  192|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 172 LRFDENENIETNGGGS 187


>AY341162-1|AAR13726.1|  192|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 172 LRFDENENIETNGGGS 187


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 231 EASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQR 121
           EA  VR + L  PE VR A    R    PG + R +R
Sbjct: 299 EAIRVRQQELRGPEAVREAAGRLRTGPVPGAAERHRR 335


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  LRLDCAENVKFNGGAS 7
           LR D  EN++ NGG S
Sbjct: 292 LRFDENENIETNGGGS 307


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 26  FTFSAQSRRRLFIEPVTVRDGSAV 97
           F    + RRR  IE + + DG+++
Sbjct: 369 FQLEERRRRRTVIEKLNIEDGTSL 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,800
Number of Sequences: 2352
Number of extensions: 7046
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)