Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17d13
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 175 4e-44
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 175 4e-44
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 175 4e-44
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 175 4e-44
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 175 4e-44
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 175 4e-44
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 175 4e-44
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 173 1e-43
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 173 2e-43
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 164 7e-41
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 162 4e-40
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 7e-12
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.001
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.019
U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein. 30 2.9
U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein. 30 2.9
EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channe... 30 2.9
BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cat... 30 2.9
BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific gu... 30 2.9
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein. 30 2.9
AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide ... 30 2.9
AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein. 30 2.9
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein. 29 3.8
AK128109-1|BAC87280.1| 139|Homo sapiens protein ( Homo sapiens ... 29 5.0
BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage ... 29 6.6
BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein. 29 6.6
AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ re... 29 6.6
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 28 8.8
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 28 8.8
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 28 8.8
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 28 8.8
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 4e-44
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 173 bits (422), Expect = 1e-43
Identities = 78/98 (79%), Positives = 88/98 (89%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSC IHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 173 bits (421), Expect = 2e-43
Identities = 78/98 (79%), Positives = 88/98 (89%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 164 bits (399), Expect = 7e-41
Identities = 75/98 (76%), Positives = 85/98 (86%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKL KLHYCVSC IHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 162 bits (393), Expect = 4e-40
Identities = 73/98 (74%), Positives = 83/98 (84%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 168
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 167 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 7e-12
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = -2
Query: 164 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 54
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -2
Query: 236 KFVIRNIVEAAAVRDINDASVY 171
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 347 MTRKRRNGGRAKHGRGHVK 291
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 204 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 317
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein.
Length = 574
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 204 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 317
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channel
1a protein protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 204 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 317
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cation
channel 2, neuronal protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 204 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 317
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific
guanine nucleotide-releasing factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 275 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 96
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 95 R 93
R
Sbjct: 409 R 409
>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
Length = 1181
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 251 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 90
DK +K + + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
>AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide
exchange factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 275 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 96
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 95 R 93
R
Sbjct: 409 R 409
>AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 275 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 96
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 95 R 93
R
Sbjct: 409 R 409
>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 251 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 90
DK +K + + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERN 407
>AK128109-1|BAC87280.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ46230 fis, clone TESTI4014977. ).
Length = 139
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 9 ALPGGRDMXPREVTLGRSTDSSVFLRSVPD 98
A P GRD PR+ T R SSV+L P+
Sbjct: 46 AFPPGRDKGPRDRTSSRHLVSSVWLGKAPE 75
>BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage
differentiation-associated 2 protein.
Length = 246
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 219 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 341
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein.
Length = 270
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 219 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 341
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ
receptor family member X protein.
Length = 246
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 219 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 341
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 107 SKVVRNRSKKDRRIRTPPES-NFPRXHVTSTRQ 12
SK + + KKD++ RTPP S N R +S+R+
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE 380
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 107 SKVVRNRSKKDRRIRTPPES-NFPRXHVTSTRQ 12
SK + + KKD++ RTPP S N R +S+R+
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE 380
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 107 SKVVRNRSKKDRRIRTPPES-NFPRXHVTSTRQ 12
SK + + KKD++ RTPP S N R +S+R+
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE 380
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 107 SKVVRNRSKKDRRIRTPPES-NFPRXHVTSTRQ 12
SK + + KKD++ RTPP S N R +S+R+
Sbjct: 139 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,186,324
Number of Sequences: 237096
Number of extensions: 898161
Number of successful extensions: 1709
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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