Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17d09
(833 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41428 Cluster: Uncharacterized 79.9 kDa protein in EGT... 413 e-114
UniRef50_O10282 Cluster: Uncharacterized 73.1 kDa protein precur... 131 2e-29
UniRef50_Q91GN0 Cluster: Putative uncharacterized protein; n=1; ... 127 4e-28
UniRef50_Q461S3 Cluster: F protein; n=2; Nucleopolyhedrovirus|Re... 56 1e-06
UniRef50_Q8QLM5 Cluster: Putative uncharacterized protein; n=2; ... 46 0.002
UniRef50_A1YJ02 Cluster: F protein; n=3; Nucleopolyhedrovirus|Re... 45 0.002
UniRef50_Q80LH8 Cluster: Fusion protein; n=1; Adoxophyes honmai ... 36 1.3
UniRef50_Q20572 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q8IHQ0 Cluster: Putative uncharacterized protein; n=4; ... 35 2.9
UniRef50_Q1FEN4 Cluster: Putative uncharacterized protein precur... 34 5.1
UniRef50_Q7RKY1 Cluster: Axonemal heavy chain dynein type 3; n=8... 33 6.7
UniRef50_Q8YNR8 Cluster: Alr4493 protein; n=3; Nostocaceae|Rep: ... 33 8.8
UniRef50_P41833 Cluster: N6-adenosine-methyltransferase IME4; n=... 33 8.8
>UniRef50_P41428 Cluster: Uncharacterized 79.9 kDa protein in EGT-IAP1
intergenic region precursor; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 79.9 kDa
protein in EGT-IAP1 intergenic region precursor -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 690
Score = 413 bits (1017), Expect = e-114
Identities = 202/255 (79%), Positives = 210/255 (82%)
Frame = -3
Query: 831 SKVCEIEMFMGRYRDVVYGMCDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYCK 652
SKVCEIEMFMGRY D V MCDIRVANYNPKKAYVNTL+DYRKWLYIFPNT VSVHYYC
Sbjct: 403 SKVCEIEMFMGRYSDDVDNMCDIRVANYNPKKAYVNTLIDYRKWLYIFPNTTVSVHYYCH 462
Query: 651 DALVQVNTKVLPGVGVMFSTMEQTCSIGITHDVTITVDSRFYVSHSTTYWPKKKFNFNNY 472
DALV+V+TKV PGVGVMFSTM QTCSI IT+DVTITVDSRFYVSHSTTYWPKKKFNFNNY
Sbjct: 463 DALVEVDTKVSPGVGVMFSTMAQTCSIRITYDVTITVDSRFYVSHSTTYWPKKKFNFNNY 522
Query: 471 IDQNMLLEKATTASFIQTVDNFTRPVLLQLFNKFHIEDYTSASQHSFHQSKIYTNSATPD 292
IDQ MLLEKATT SFI TVDNFTRPVLLQL +KFHI+DYTS H FHQSKIYTNSA PD
Sbjct: 523 IDQ-MLLEKATT-SFIPTVDNFTRPVLLQLPHKFHIKDYTSTPHHFFHQSKIYTNSAAPD 580
Query: 291 EDSQDDSNXXXXXXXXXXXXTXXXXXXXXXXXXCIKKRCHQSNNVTVQYKNNDEFVTICN 112
EDSQDDSN CIKKRCHQSNNV VQYKNN+EFVTICN
Sbjct: 581 EDSQDDSN-TTVVIIAIVAAMILFCGLLLFLFCCIKKRCHQSNNVVVQYKNNNEFVTICN 639
Query: 111 NLENNRAYINLTNEY 67
NLE+NRAYINL NEY
Sbjct: 640 NLEDNRAYINLPNEY 654
>UniRef50_O10282 Cluster: Uncharacterized 73.1 kDa protein
precursor; n=6; Nucleopolyhedrovirus|Rep:
Uncharacterized 73.1 kDa protein precursor - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 657
Score = 131 bits (316), Expect = 2e-29
Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 1/178 (0%)
Frame = -3
Query: 822 CEIEMFMGRYRDVVYGMCDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYCKDAL 643
CEIEMFMGRY + CD+RVA+ P + + LV+ RKW+Y F ++N +V Y+C A
Sbjct: 390 CEIEMFMGRYARDIDVQCDMRVADNRPSQVLLGPLVNCRKWVYSF-SSNATVSYWC-GAR 447
Query: 642 VQVNTKVLPGVGVMFSTMEQTCSIGITHDVTI-TVDSRFYVSHSTTYWPKKKFNFNNYID 466
V GVGV+ + TCS+ + D + TVD+R + + S YWP+++FN+N+Y++
Sbjct: 448 DAATVAVPAGVGVVVAQSPLTCSVRVNKDALLFTVDTRSHKAASRAYWPRRRFNYNDYVN 507
Query: 465 QNMLLEKATTASFIQTVDNFTRPVLLQLFNKFHIEDYTSASQHSFHQSKIYTNSATPD 292
++LL+ TT SF TV + + L L ++FHI DY + +H+F + +++A PD
Sbjct: 508 TSLLLQ--TTTSFADTVTDLSAQQLKTLRSRFHIRDY-ATPRHTFFAPR-RSDAAAPD 561
>UniRef50_Q91GN0 Cluster: Putative uncharacterized protein; n=1;
Epiphyas postvittana NPV|Rep: Putative uncharacterized
protein - Epiphyas postvittana nucleopolyhedrovirus
(EppoMNPV)
Length = 649
Score = 127 bits (306), Expect = 4e-28
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Frame = -3
Query: 831 SKVCEIEMFMGRYRDVVYGMCDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYCK 652
S VCEIEMFMGRY + +CDIRVA+ N K+ ++TLV RKWLY F N+SV C
Sbjct: 381 SGVCEIEMFMGRYASDIDTLCDIRVADNNAKQVLMDTLVVGRKWLYSFAK-NMSVGCLCN 439
Query: 651 DALVQVNTKVLPGVGVMFSTMEQTCSIGITHD-VTITVDSRFYVSHSTTYWPKKKFNFNN 475
+ V V PGVG++ + CSI I + + D++ Y + S TY P+K+F++NN
Sbjct: 440 HYPMDVVVSVPPGVGLITTQPSNFCSIRIINTLILFNADTQLYATESITYEPRKQFDYNN 499
Query: 474 YIDQNMLLEKATTASFIQTVDNFTRPVLLQLFNKFHIEDYTSASQHSF 331
Y+D ++L + T+ F V + T L L ++FHI DYT+ + F
Sbjct: 500 YVDGSLLSQ--TSTPFADAVTDLTLTKLRLLRSRFHIRDYTAPPKTFF 545
>UniRef50_Q461S3 Cluster: F protein; n=2; Nucleopolyhedrovirus|Rep:
F protein - Trichoplusia ni SNPV
Length = 661
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Frame = -3
Query: 831 SKVCEIEMFMGRYRDVVYGM-CDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYC 655
+++C+I +F+ +D+ + CD+R+ + + Y + D+ +WLY+ N V V++ C
Sbjct: 388 AQLCDIRIFLKNDKDINFEKDCDVRIGKFESEIFY--KITDFNRWLYVLEN-EVDVNFDC 444
Query: 654 K---DALVQVNTKVL-PGVGVMFSTMEQTCSIGITHDVTITVDS 535
D V NT VL PG+G++ +T + TC + T+++
Sbjct: 445 LQKGDNSVSANTLVLSPGIGIINATGKHTCQLSTKRTFLTTIET 488
>UniRef50_Q8QLM5 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-A
Length = 680
Score = 45.6 bits (103), Expect = 0.002
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Frame = -3
Query: 831 SKVCEIEMFMGRYRDV-VYGMCDIRVANYNPKKAYVNTLVDYRKWLYIFPN-TNVSVHYY 658
+++C+I +F +DV V CD+R+ + Y + DY WLY+ + TNV+V +
Sbjct: 399 ARMCDIRLFTKSDKDVQVTRDCDVRLGRFEDVLFY--PIADYNNWLYVMQHDTNVNVQCH 456
Query: 657 CKDALVQVNT----KVLPGVGVMFSTMEQTCSI 571
D + + KV GVGV+ + ++TC +
Sbjct: 457 KSDGIPADHKFDPIKVSAGVGVIRAIGQETCKL 489
>UniRef50_A1YJ02 Cluster: F protein; n=3; Nucleopolyhedrovirus|Rep:
F protein - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 702
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Frame = -3
Query: 831 SKVCEIEMFMGRYRDVVYGM-CDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYC 655
+K+C+I++F+ +D+ Y CDIRV + + Y + DY WLY+ N ++ ++ C
Sbjct: 401 AKLCDIKIFIKNDKDIDYNRDCDIRVGKFESELFYATS--DYNNWLYVLQN-DIDLNIQC 457
Query: 654 -----KDALVQVNTKVL-PGVGVMFSTMEQTCSIGITHDVTITVDSRFYVSHSTTYWP-K 496
+ + + VL GVG++ +T + C + T +TV + +S P
Sbjct: 458 IPSDTRPDGMSIEPVVLHAGVGLIHATGKDNCKL-TTKKSRLTVHDLYNNLNSVIEIPIG 516
Query: 495 KKFNFN 478
FNF+
Sbjct: 517 LTFNFS 522
>UniRef50_Q80LH8 Cluster: Fusion protein; n=1; Adoxophyes honmai
NPV|Rep: Fusion protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 669
Score = 35.9 bits (79), Expect = 1.3
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = -3
Query: 822 CEIEMFMGRYRDVVYGMCDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYCKDAL 643
C+I++ + + CD+RV + + Y + DY WLY+ N + + + C D+
Sbjct: 388 CDIKILLNNEVVDIEKNCDVRVGKFYSEIFY--PISDYNNWLYVLEN-DTELLFDCADSY 444
Query: 642 VQVNTKVLPGVGVMFSTMEQTCSIGITHDVTITV-DSRFYVSHSTTYWP--KKKFNFNNY 472
+ + G G++ + C++ T V++++ + + HSTT +FN +
Sbjct: 445 I-----LKAGTGIIRGDGTKNCNMN-TKKVSLSLRQLKNNLMHSTTLMAPISSQFNLSAA 498
Query: 471 ID 466
ID
Sbjct: 499 ID 500
>UniRef50_Q20572 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 293
Score = 35.5 bits (78), Expect = 1.7
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +1
Query: 334 RMLRRRCVIFNVKFIKKLQ*NRTGKIVNSLYKTGG--GCFFKQHILVDVVVKIKF--LFR 501
RM RRC FN +F K N TG + N+L + G F+Q++L + ++KIK L +
Sbjct: 107 RMHMRRCRRFNYQFSKFA--NHTGALFNNLMHSNEQLGTLFQQYVLDEHIIKIKTGRLSK 164
Query: 502 PVCS*MADIKS 534
P + +I+S
Sbjct: 165 PATEEVPNIES 175
>UniRef50_Q8IHQ0 Cluster: Putative uncharacterized protein; n=4;
Eukaryota|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3207
Score = 34.7 bits (76), Expect = 2.9
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Frame = -3
Query: 486 NFNNYIDQNMLLEKATT--ASFIQTVDNFTRPVLLQLFNKFHIEDYTSASQHSFHQSKIY 313
N+ NY ++N + + T A+ +D+ N HI + S +Q +H SKI
Sbjct: 2190 NYYNYSNKNFYMNEKYTEGATNFMNIDDMKDA---GNENNMHILNNNSINQTYYH-SKIK 2245
Query: 312 TNSATPDEDSQDDSNXXXXXXXXXXXXTXXXXXXXXXXXXCIKKRCHQSNNVTVQYKNND 133
N+ D+D+ +++N K H N +Q + N
Sbjct: 2246 NNNNNDDDDNNNNNNNNNNDNNDNNNIMMHNNYQPFLYENQYNKHIHMMNQ-QIQKETNT 2304
Query: 132 EFVTI-CNN--LENNRAYINLTNE 70
F I CN +ENN+ IN++N+
Sbjct: 2305 SFKHITCNQKFIENNK--INISND 2326
>UniRef50_Q1FEN4 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium phytofermentans ISDg|Rep:
Putative uncharacterized protein precursor - Clostridium
phytofermentans ISDg
Length = 483
Score = 33.9 bits (74), Expect = 5.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 618 PGVGVMFSTMEQTCSIGITHDVTITVDSRFYVSHSTTYWPKKKFNFNNYIDQNMLLEKAT 439
P + V + ++ S+ D+ +DS FY+ S+T K FN N + +NM ++K T
Sbjct: 221 PAISVS-NLIQSNYSLEKLSDINYLIDS-FYIVDSSTTVTKSLFNVNELLKKNMAIKKRT 278
Query: 438 TA 433
A
Sbjct: 279 DA 280
>UniRef50_Q7RKY1 Cluster: Axonemal heavy chain dynein type 3; n=8;
cellular organisms|Rep: Axonemal heavy chain dynein type
3 - Plasmodium yoelii yoelii
Length = 3690
Score = 33.5 bits (73), Expect = 6.7
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Frame = -3
Query: 831 SKVCEIEMFMGRYRDVVYGMCDIRVANYNPKKAYVNTLVDYRKWL---YIFPNTNVSVHY 661
S + I++F+ ++++ C + Y+N ++ K+ + F N+ S H
Sbjct: 1629 SMLYNIDVFIKNKKNIIISGCS-NIGKSLTVDCYLNRIIGNDKFFTVDFYFSNSTTSKHV 1687
Query: 660 --YCKDALVQVNTKVLPGVGVMFSTMEQTCSIGITHDVTITVDSRFYVSHSTTYWPKKKF 487
Y + L+++ T I I +V S + SH + + F
Sbjct: 1688 RNYIESKLIKIRNNFYGTPNNKICTF-YIDDINIETEVGSFKRSHYLSSHE---FLRMLF 1743
Query: 486 NFNNYIDQNMLLEKATTASFIQTVDN-FTRPVLLQLFNKFHIEDYTS 349
N+N +ID+++ L+ + + T++N +L+N F+I Y S
Sbjct: 1744 NYNFFIDEHLSLKYVDDLTCLATMNNSHANNKTSRLYNNFNIIYYNS 1790
>UniRef50_Q8YNR8 Cluster: Alr4493 protein; n=3; Nostocaceae|Rep:
Alr4493 protein - Anabaena sp. (strain PCC 7120)
Length = 295
Score = 33.1 bits (72), Expect = 8.8
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 520 ADIKSRIYSYGHIMRYSNRTRLLHSRKHNTNAGQNFCINLYKRVFTIIVDGHVRVWKNV 696
AD+ R+ + G+ + Y+ + L+H R H+ N + Y+R H VW+ +
Sbjct: 204 ADLCRRVQNQGYKILYTPQVSLIHIRGHSMKKNANATVVEYRRSQLYYYKKHCPVWERI 262
>UniRef50_P41833 Cluster: N6-adenosine-methyltransferase IME4; n=4;
Saccharomycetaceae|Rep: N6-adenosine-methyltransferase
IME4 - Saccharomyces cerevisiae (Baker's yeast)
Length = 600
Score = 33.1 bits (72), Expect = 8.8
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -3
Query: 468 DQNMLLEKATTASFIQTVDNFTRPVLLQLFNKFHIEDYTSASQHSFHQSKIYTNSATPDE 289
DQN+L+ A I +D F+ +L +NKFH YT S S + K+ + + P+
Sbjct: 76 DQNLLV--ADRPEKIVYLDVFSLKIL---YNKFHAFYYTLKSSSSSCEEKVSSLTTKPEA 130
Query: 288 DSQDD 274
DS+ D
Sbjct: 131 DSEKD 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,832,090
Number of Sequences: 1657284
Number of extensions: 14758940
Number of successful extensions: 43091
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43043
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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