Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17d05
(661 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 25 1.6
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 2.8
DQ013849-1|AAY40258.1| 264|Anopheles gambiae CYP325C2 protein. 24 4.9
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 6.5
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 23 8.5
AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 23 8.5
>EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein.
Length = 481
Score = 25.4 bits (53), Expect = 1.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 612 SPGTDAPQRPERSPPKVPGA 553
+P + Q+P PPK PGA
Sbjct: 87 APNQNEQQQPRPQPPKTPGA 106
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.6 bits (51), Expect = 2.8
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 609 PGTDAPQRPERSPPKVPG 556
PG P RP+ P VPG
Sbjct: 222 PGVPMPMRPQMPPGAVPG 239
Score = 24.6 bits (51), Expect = 2.8
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = -2
Query: 597 APQRPERSPPKVPG---APLDRNSDN*TQRCEKQR-NSRT 490
+P P +SP K+PG P + +S++ ++ KQR N++T
Sbjct: 592 SPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKT 631
>DQ013849-1|AAY40258.1| 264|Anopheles gambiae CYP325C2 protein.
Length = 264
Score = 23.8 bits (49), Expect = 4.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 639 IWAPSAPLWSPGTDAPQRPE 580
IW P A L+ P P+R E
Sbjct: 174 IWGPDADLFDPDRFLPERSE 193
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 221 TWQGRAATRTVTSAPPSVRSTHTTV 295
TW T T + PP +T TTV
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTV 188
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 221 TWQGRAATRTVTSAPPSVRSTHTTV 295
TW T T + PP +T TTV
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTV 188
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 221 TWQGRAATRTVTSAPPSVRSTHTTV 295
TW T T + PP +T TTV
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTV 188
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 221 TWQGRAATRTVTSAPPSVRSTHTTV 295
TW T T + PP +T TTV
Sbjct: 163 TWSAPTTTTTWSDQPPPPTTTTTTV 187
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 221 TWQGRAATRTVTSAPPSVRSTHTTV 295
TW T T + PP +T TTV
Sbjct: 163 TWSAPTTTTTWSDQPPPPTTTTTTV 187
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 221 TWQGRAATRTVTSAPPSVRSTHTTV 295
TW T T + PP +T TTV
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTV 188
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.0 bits (47), Expect = 8.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 141 MPSYADAGWAMLAYNQLRYNIS 76
MP A W +AY++ R+N S
Sbjct: 195 MPIEQIATWVCIAYHESRFNTS 216
>AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450
CYP9K1 protein.
Length = 531
Score = 23.0 bits (47), Expect = 8.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -2
Query: 639 IWAPSAPLWSPGTDAPQR----PERSPPKVPGAPLDRNS 535
+W P+A + P+ PER P+ GAP+D ++
Sbjct: 426 LWIPAAAIMRDPQLFPEPDRFWPERFEPESAGAPVDSSA 464
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,498
Number of Sequences: 2352
Number of extensions: 12892
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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