Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17d05
(661 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024190-1|ABC86252.1| 358|Drosophila melanogaster RH12113p pro... 34 0.20
AE014298-2411|AAS65388.1| 358|Drosophila melanogaster CG4429-PC... 34 0.20
AY070572-1|AAL48043.1| 493|Drosophila melanogaster RE11719p pro... 32 0.79
AE014298-572|AAF45903.1| 493|Drosophila melanogaster CG15239-PA... 32 0.79
AE014298-2413|AAN09409.1| 324|Drosophila melanogaster CG4429-PB... 31 1.4
AE014298-2412|AAF48616.1| 325|Drosophila melanogaster CG4429-PA... 31 1.4
BT011455-1|AAR99113.1| 232|Drosophila melanogaster RE34140p pro... 29 5.6
AY119072-1|AAM50932.1| 747|Drosophila melanogaster LP08967p pro... 29 5.6
AY060759-1|AAL28307.1| 215|Drosophila melanogaster GH21008p pro... 29 5.6
AF207538-1|AAG23732.1| 215|Drosophila melanogaster peptidoglyca... 29 5.6
AF207537-1|AAG23731.1| 215|Drosophila melanogaster peptidoglyca... 29 5.6
AE014297-1306|AAN13506.1| 215|Drosophila melanogaster CG14704-P... 29 5.6
AE014297-1305|AAF54643.1| 215|Drosophila melanogaster CG14704-P... 29 5.6
AE014297-1304|AAN13505.1| 232|Drosophila melanogaster CG14704-P... 29 5.6
AE014134-2282|AAF53246.1| 747|Drosophila melanogaster CG5204-PA... 29 5.6
AE013599-3584|AAF46989.2| 1395|Drosophila melanogaster CG13550-P... 28 9.8
>BT024190-1|ABC86252.1| 358|Drosophila melanogaster RH12113p
protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.20
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 533 SEFRSRGAPGTLGGDRSGRWGASVPGDHRGA 625
S+ SRG PGT GG R G G+ GD RG+
Sbjct: 147 SQSYSRGGPGTGGGGREGGGGSGNRGDSRGS 177
>AE014298-2411|AAS65388.1| 358|Drosophila melanogaster CG4429-PC,
isoform C protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.20
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 533 SEFRSRGAPGTLGGDRSGRWGASVPGDHRGA 625
S+ SRG PGT GG R G G+ GD RG+
Sbjct: 147 SQSYSRGGPGTGGGGREGGGGSGNRGDSRGS 177
>AY070572-1|AAL48043.1| 493|Drosophila melanogaster RE11719p
protein.
Length = 493
Score = 31.9 bits (69), Expect = 0.79
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -2
Query: 645 AAIWAPSAPLWSPGTDAPQRPERSPPKVPGAPLDRNSDN*TQRCEKQRNSRTNK 484
AA AP+APL +P AP E + P + D+ T + +K + ++ NK
Sbjct: 413 AAPAAPAAPLAAPAAAAPIEGEVAAAVTPATTAAADEDSTTPKSKKSKKAKKNK 466
>AE014298-572|AAF45903.1| 493|Drosophila melanogaster CG15239-PA
protein.
Length = 493
Score = 31.9 bits (69), Expect = 0.79
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -2
Query: 645 AAIWAPSAPLWSPGTDAPQRPERSPPKVPGAPLDRNSDN*TQRCEKQRNSRTNK 484
AA AP+APL +P AP E + P + D+ T + +K + ++ NK
Sbjct: 413 AAPAAPAAPLAAPAAAAPIEGEVAAAVTPATTAAADEDSTTPKSKKSKKAKKNK 466
>AE014298-2413|AAN09409.1| 324|Drosophila melanogaster CG4429-PB,
isoform B protein.
Length = 324
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 533 SEFRSRGAPGTLGGDRSGRWGASVPGDHR 619
S+ SRG PGT GG R G G+ GD R
Sbjct: 146 SQSYSRGGPGTGGGGREGGGGSGNRGDSR 174
>AE014298-2412|AAF48616.1| 325|Drosophila melanogaster CG4429-PA,
isoform A protein.
Length = 325
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 533 SEFRSRGAPGTLGGDRSGRWGASVPGDHR 619
S+ SRG PGT GG R G G+ GD R
Sbjct: 147 SQSYSRGGPGTGGGGREGGGGSGNRGDSR 175
>BT011455-1|AAR99113.1| 232|Drosophila melanogaster RE34140p
protein.
Length = 232
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 206 APVVPHVHPQAAAPQKPHQSPPAAP 230
>AY119072-1|AAM50932.1| 747|Drosophila melanogaster LP08967p
protein.
Length = 747
Score = 29.1 bits (62), Expect = 5.6
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -2
Query: 660 PFSSLAAIWAPSAPLWSPGTDAPQRPERSPPKVPGAPLDRNSDN*TQRCEKQRNSRTNK 484
P S + A SAP PG A + E S P G P + N+D+ +C+ +RN N+
Sbjct: 68 PLSMAGFVSADSAP---PGDLAKENMENSLPD--GNPCNNNNDDELPQCKIRRNYSCNQ 121
>AY060759-1|AAL28307.1| 215|Drosophila melanogaster GH21008p
protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 189 APVVPHVHPQAAAPQKPHQSPPAAP 213
>AF207538-1|AAG23732.1| 215|Drosophila melanogaster
peptidoglycan-recognition protein-LB isoform 2 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 189 APVVPHVHPQAAAPQKPHQSPPAAP 213
>AF207537-1|AAG23731.1| 215|Drosophila melanogaster
peptidoglycan-recognition protein-LB isoform 1 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 189 APVVPHVHPQAAAPQKPHQSPPAAP 213
>AE014297-1306|AAN13506.1| 215|Drosophila melanogaster CG14704-PB,
isoform B protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 189 APVVPHVHPQAAAPQKPHQSPPAAP 213
>AE014297-1305|AAF54643.1| 215|Drosophila melanogaster CG14704-PA,
isoform A protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 189 APVVPHVHPQAAAPQKPHQSPPAAP 213
>AE014297-1304|AAN13505.1| 232|Drosophila melanogaster CG14704-PC,
isoform C protein.
Length = 232
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 633 APSAPLWSPGTDAPQRPERSPPKVP 559
AP P P APQ+P +SPP P
Sbjct: 206 APVVPHVHPQAAAPQKPHQSPPAAP 230
>AE014134-2282|AAF53246.1| 747|Drosophila melanogaster CG5204-PA
protein.
Length = 747
Score = 29.1 bits (62), Expect = 5.6
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -2
Query: 660 PFSSLAAIWAPSAPLWSPGTDAPQRPERSPPKVPGAPLDRNSDN*TQRCEKQRNSRTNK 484
P S + A SAP PG A + E S P G P + N+D+ +C+ +RN N+
Sbjct: 68 PLSMAGFVSADSAP---PGDLAKENMENSLPD--GNPCNNNNDDELPQCKIRRNYSCNQ 121
>AE013599-3584|AAF46989.2| 1395|Drosophila melanogaster CG13550-PA
protein.
Length = 1395
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 518 AVKNNGTLEQIKILYLLDSRRDLRPGFRRSELRFSVLTLIYVKKIHTKRCARDGK 354
AVK + L++ Y LD+ +D RP + L +++ ++ H + A G+
Sbjct: 1337 AVKASLRLQRFGFKYTLDALKDYRPNYELDPLTRAMIRCFAKRRRHFRHVAATGR 1391
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,907,528
Number of Sequences: 53049
Number of extensions: 565351
Number of successful extensions: 1860
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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