Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17c17
(915 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O43242 Cluster: 26S proteasome non-ATPase regulatory su... 387 e-106
UniRef50_O42897 Cluster: Probable 26S proteasome regulatory subu... 293 5e-78
UniRef50_Q9LNU4 Cluster: Probable 26S proteasome non-ATPase regu... 284 3e-75
UniRef50_UPI000150A068 Cluster: PCI domain containing protein; n... 270 3e-71
UniRef50_Q04908 Cluster: 26S proteasome non-ATPase regulatory su... 268 1e-70
UniRef50_A4RQF9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 268 2e-70
UniRef50_Q1ZXD3 Cluster: 26S proteasome regulatory subunit S3; n... 267 2e-70
UniRef50_Q5AHZ8 Cluster: Likely 26S proteasome regulatory partic... 266 7e-70
UniRef50_A5K825 Cluster: 26S proteasome non-ATPase regulatory su... 247 4e-64
UniRef50_Q5KQ43 Cluster: Putative uncharacterized protein; n=1; ... 242 8e-63
UniRef50_A7AT48 Cluster: 26S proteasome non-ATPase regulatory su... 231 1e-59
UniRef50_Q4N2B3 Cluster: Proteasome regulatory component, putati... 225 2e-57
UniRef50_UPI000049A3B2 Cluster: proteasome regulatory subunit; n... 221 2e-56
UniRef50_A3KFN0 Cluster: Proteasome (Prosome, macropain) 26S sub... 214 2e-54
UniRef50_A0BUN6 Cluster: Chromosome undetermined scaffold_13, wh... 213 5e-54
UniRef50_Q4P9G1 Cluster: Putative uncharacterized protein; n=1; ... 210 3e-53
UniRef50_A4HFS3 Cluster: Proteasome regulatory non-ATP-ase subun... 210 5e-53
UniRef50_P40016 Cluster: 26S proteasome regulatory subunit RPN3;... 203 6e-51
UniRef50_Q5CVH2 Cluster: 26S proteasomal subunit S3; PINT domain... 186 7e-46
UniRef50_O95325 Cluster: Proteasome subunit p58; n=4; Mammalia|R... 128 3e-28
UniRef50_A2D9L4 Cluster: PCI domain containing protein; n=1; Tri... 111 2e-23
UniRef50_Q8SRT7 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 3; n=... 75 3e-12
UniRef50_Q4N5D2 Cluster: Putative uncharacterized protein; n=3; ... 55 2e-06
UniRef50_A2YQQ1 Cluster: Putative uncharacterized protein; n=3; ... 53 9e-06
UniRef50_Q00WB4 Cluster: COP9 signalosome, subunit CSN3; n=1; Os... 50 6e-05
UniRef50_A4S136 Cluster: Predicted protein; n=2; Ostreococcus|Re... 49 2e-04
UniRef50_A3LPN7 Cluster: Predicted protein; n=1; Pichia stipitis... 49 2e-04
UniRef50_UPI00015B42AC Cluster: PREDICTED: similar to COP9 const... 48 3e-04
UniRef50_A0CW78 Cluster: Chromosome undetermined scaffold_3, who... 48 3e-04
UniRef50_UPI000023F272 Cluster: hypothetical protein FG05086.1; ... 48 4e-04
UniRef50_A7SPX9 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.003
UniRef50_Q8W575 Cluster: COP9 signalosome complex subunit 3; n=7... 45 0.003
UniRef50_Q5CNP2 Cluster: PINT domain protein (Proteasomal subuni... 44 0.004
UniRef50_Q2PQ76 Cluster: COP9 signalosome complex subunit 3; n=2... 43 0.013
UniRef50_Q6BWF2 Cluster: Similar to CA4976|IPF4708 Candida albic... 43 0.013
UniRef50_UPI000049A2D6 Cluster: conserved hypothetical protein; ... 41 0.038
UniRef50_A4RJQ3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.067
UniRef50_Q582U5 Cluster: COP9 signalosome complex subunit 2, put... 39 0.20
UniRef50_Q54PX7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.36
UniRef50_Q6C3I5 Cluster: Similar to AAH45415 Danio rerio Similar... 36 1.1
UniRef50_UPI0000E4A144 Cluster: PREDICTED: similar to COP9 const... 36 1.9
UniRef50_A0BZR7 Cluster: Chromosome undetermined scaffold_14, wh... 35 2.5
UniRef50_UPI00006CC900 Cluster: HT004 protein, putative; n=1; Te... 35 3.3
UniRef50_UPI000049857B Cluster: PCI domain protein; n=1; Entamoe... 35 3.3
UniRef50_A0C026 Cluster: Chromosome undetermined scaffold_14, wh... 35 3.3
UniRef50_Q1MLL8 Cluster: Putative ROK family transcriptional reg... 34 4.4
UniRef50_Q756Q1 Cluster: AER203Cp; n=1; Eremothecium gossypii|Re... 34 4.4
UniRef50_A7TN59 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q3SUF6 Cluster: RecA-family ATPase; n=1; Nitrobacter wi... 34 5.8
UniRef50_Q44P31 Cluster: Zinc-containing alcohol dehydrogenase s... 34 5.8
UniRef50_Q7RXP7 Cluster: Putative uncharacterized protein NCU001... 34 5.8
UniRef50_UPI000038DBEA Cluster: COG0457: FOG: TPR repeat; n=1; N... 33 7.7
UniRef50_Q6LF99 Cluster: Putative uncharacterized protein; n=4; ... 33 7.7
UniRef50_Q9Y820 Cluster: Nuclear pore associated protein Thp1-Sa... 33 7.7
UniRef50_Q0V091 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_O43242 Cluster: 26S proteasome non-ATPase regulatory subunit
3; n=43; Eumetazoa|Rep: 26S proteasome non-ATPase
regulatory subunit 3 - Homo sapiens (Human)
Length = 534
Score = 387 bits (952), Expect = e-106
Identities = 188/278 (67%), Positives = 220/278 (79%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NYLHYSLYDQA+KLVSKSVFPE A+NNEWAR+LYY GRIKA +LEYS+A + + ALRKA
Sbjct: 257 NYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKA 316
Query: 723 PQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFG 544
PQ AVGF+QTV KL IVVELLLG+IP+R+ FRQ L+++L PYF LTQAVR GNL +F
Sbjct: 317 PQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFN 376
Query: 543 EVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEF 364
+VL+ +G +F+ D T+TLI+RLR NVIKT +R I LSYSRIS DIA+KL LDS EDAEF
Sbjct: 377 QVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEF 436
Query: 363 IVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRY 184
IVAKAIRDGVIEA+++ KGY+ +KE DIY TREPQLAFHQRISFCLD+HN SVKAMR+
Sbjct: 437 IVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRF 496
Query: 183 PPKSYGKXXXXXXXXXXXXXXXXXXAKEMAEEDDDGFP 70
PPKSY K AKEMAE+DDD FP
Sbjct: 497 PPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSFP 534
>UniRef50_O42897 Cluster: Probable 26S proteasome regulatory subunit
rpn3; n=1; Schizosaccharomyces pombe|Rep: Probable 26S
proteasome regulatory subunit rpn3 - Schizosaccharomyces
pombe (Fission yeast)
Length = 497
Score = 293 bits (718), Expect = 5e-78
Identities = 142/242 (58%), Positives = 181/242 (74%), Gaps = 1/242 (0%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NY+ ++LYDQAD+LVSK+ F NASNN R+ YYLGRI+A +L+Y+ AH+HLV A+RKA
Sbjct: 219 NYIQFNLYDQADRLVSKTSFLTNASNNLAIRYQYYLGRIRAIQLDYTTAHEHLVSAIRKA 278
Query: 723 PQTA-AVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRF 547
P T AV F + V KL IVV+LL+G+IPER IFRQ L K L PY +++QAVR+G+L F
Sbjct: 279 PNTVYAVQFLEAVYKLHIVVQLLMGEIPERRIFRQKSLEKTLVPYLRISQAVRIGDLCAF 338
Query: 546 GEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAE 367
+ L Y +FR D +TLI RLR VIKT +R I LSYSRIS +D+ KLGLDS E AE
Sbjct: 339 TDALSKYEAEFRFDGLYTLICRLRHTVIKTGLRMISLSYSRISLRDVCIKLGLDSEESAE 398
Query: 366 FIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMR 187
+IVAK IRDGVI+A++D +M++ E+ DIY T +PQ AFH+RI FCL LHN S+K+MR
Sbjct: 399 YIVAKGIRDGVIDASIDHSNAFMASNEAMDIYSTEQPQQAFHERIQFCLALHNDSIKSMR 458
Query: 186 YP 181
YP
Sbjct: 459 YP 460
>UniRef50_Q9LNU4 Cluster: Probable 26S proteasome non-ATPase
regulatory subunit 3a; n=18; Eukaryota|Rep: Probable 26S
proteasome non-ATPase regulatory subunit 3a - Arabidopsis
thaliana (Mouse-ear cress)
Length = 488
Score = 284 bits (696), Expect = 3e-75
Identities = 149/280 (53%), Positives = 194/280 (69%), Gaps = 3/280 (1%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NYLHY+LYDQA+KL SK+ E SN ++ R+L+YLG+I+ +LEY+DA + L+QA RKA
Sbjct: 211 NYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKA 270
Query: 723 PQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFG 544
P AA+GFR K AI+V LLLG+IPER IF Q + KAL PYF+LT AVR+G+L+ F
Sbjct: 271 P-IAALGFRIQCNKWAILVRLLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGDLELFR 329
Query: 543 EVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDS---AED 373
V E + F D T LI+RLR NVI+T +R+I +SYSRIS D+A+KL L+S D
Sbjct: 330 TVQEKFLDTFAQDRTHNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENPVAD 389
Query: 372 AEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKA 193
AE IVAKAIRDG I+AT+D G M +KE+ DIY T EPQ AF+ RI+FCL++HN++V+A
Sbjct: 390 AESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRA 449
Query: 192 MRYPPKSYGKXXXXXXXXXXXXXXXXXXAKEMAEEDDDGF 73
+R+PP ++ K AK MAEEDDD F
Sbjct: 450 LRFPPNTH-KEKESDEKRRERKQQEEELAKHMAEEDDDDF 488
>UniRef50_UPI000150A068 Cluster: PCI domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: PCI domain containing
protein - Tetrahymena thermophila SB210
Length = 483
Score = 270 bits (662), Expect = 3e-71
Identities = 134/249 (53%), Positives = 171/249 (68%)
Frame = -1
Query: 915 ACWENYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQA 736
A NYLHY+ Y+ A VSK FPEN SNNE RFLYY GRIKA ++EYS+A +L QA
Sbjct: 209 AILRNYLHYNHYEAAQHFVSKITFPENVSNNELIRFLYYTGRIKAVQVEYSEAFNYLNQA 268
Query: 735 LRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNL 556
L+K+P +A+GFR QKLAI+VE L+G+IP R IF + K L PY++L Q+V GNL
Sbjct: 269 LKKSPDNSALGFRIEAQKLAIIVEFLMGNIPSRDIFTKQEFWKPLYPYYKLVQSVLRGNL 328
Query: 555 QRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAE 376
F +V+ Y F D F+LI RL+Q VIKT +R I LSYSRIS DIA+KL L
Sbjct: 329 LDFNKVVAQYANLFIKDKNFSLIQRLQQTVIKTGLRKINLSYSRISFTDIAQKLDLKKNS 388
Query: 375 DAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVK 196
D EFIVAKAIRDG++ A +D Y+ K+ +DIY T +PQ AF +RIS+CL+LHN + K
Sbjct: 389 DVEFIVAKAIRDGILNAKIDHENQYIVIKQENDIYSTNQPQDAFAKRISYCLNLHNSATK 448
Query: 195 AMRYPPKSY 169
A++YP +Y
Sbjct: 449 ALQYPDTNY 457
>UniRef50_Q04908 Cluster: 26S proteasome non-ATPase regulatory subunit
3; n=2; Caenorhabditis|Rep: 26S proteasome non-ATPase
regulatory subunit 3 - Caenorhabditis elegans
Length = 504
Score = 268 bits (657), Expect = 1e-70
Identities = 146/286 (51%), Positives = 185/286 (64%), Gaps = 6/286 (2%)
Frame = -1
Query: 912 CW--ENYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQ 739
CW YL Y A LVSK FP+NASNN+ AR++YY GRIKA +L+Y+ A + +Q
Sbjct: 220 CWLLRCYLINRQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQ 279
Query: 738 ALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGN 559
A RKAPQ A+GF+Q VQK +V+ LL G+IP+R +FRQ RK LA Y L++ VR G+
Sbjct: 280 AQRKAPQEGAIGFKQAVQKWVVVIGLLQGEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGD 339
Query: 558 LQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSA 379
+ RF LE + QF D T TLI+RLRQNVIKTAI+ I L+YSRI KDIA+KL + +
Sbjct: 340 VARFNHNLEQFKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRIYIKDIAKKLYITNE 399
Query: 378 EDAEFIVAKAIRDGVIEA--TLDPVKG--YMSNKESSDIYCTREPQLAFHQRISFCLDLH 211
+ E+IVAKAI DG I+A T D G YM + E++DIY T EPQ F RI +CL+LH
Sbjct: 400 TETEYIVAKAIADGAIDAVITSDVRDGPRYMQSSETADIYRTSEPQAHFDTRIRYCLELH 459
Query: 210 NQSVKAMRYPPKSYGKXXXXXXXXXXXXXXXXXXAKEMAEEDDDGF 73
NQ+VKA+RYPPK AKE+A+EDDD F
Sbjct: 460 NQAVKALRYPPKK-KIAVETIEQAREREQQELEFAKELADEDDDDF 504
>UniRef50_A4RQF9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 445
Score = 268 bits (656), Expect = 2e-70
Identities = 132/247 (53%), Positives = 170/247 (68%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NYLHY+LYD A+KL S+ P++ S + R+ YYLGRI+A +LEYS+A ++L QA +KA
Sbjct: 168 NYLHYNLYDHAEKLRSRVTLPQSRSIQQQCRYAYYLGRIRAVQLEYSEAKEYLTQAYQKA 227
Query: 723 PQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFG 544
P T A GFR + K +V +LLG+IPER Q +R ALAPYF L QAVR+G+L F
Sbjct: 228 P-TGAKGFRLELLKWITIVRMLLGEIPERKELTQPEMRAALAPYFDLVQAVRMGDLTAFQ 286
Query: 543 EVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEF 364
E +G F D LI RLR NVI+T + I +YS+IS D+A KLGL S EDAE
Sbjct: 287 RAAETHGTTFTEDKLSNLINRLRANVIRTGLTRINTAYSKISLADVAEKLGLPSVEDAES 346
Query: 363 IVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRY 184
+VAKAIRDG ++A +D M +KE++D+Y T+EPQ AFH RI+FCLD HN++VKAMRY
Sbjct: 347 VVAKAIRDGNVDAVIDHSAKVMYSKETTDVYSTQEPQSAFHVRIAFCLDTHNEAVKAMRY 406
Query: 183 PPKSYGK 163
PPK K
Sbjct: 407 PPKEKAK 413
>UniRef50_Q1ZXD3 Cluster: 26S proteasome regulatory subunit S3; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S3 - Dictyostelium discoideum AX4
Length = 504
Score = 267 bits (655), Expect = 2e-70
Identities = 127/243 (52%), Positives = 176/243 (72%), Gaps = 1/243 (0%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NYL Y+L++QADKL++ + FPE+AS+N++AR+ YY GRI+A +LEY+++ K L QA+RKA
Sbjct: 225 NYLEYNLFEQADKLLANTQFPESASSNQFARYFYYQGRIRAIQLEYAESFKFLTQAIRKA 284
Query: 723 PQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFG 544
PQ A GFR+TV KL +V+LL+G+IPER F Q L+ AL PYF LT+AVR+G+L F
Sbjct: 285 PQNTAGGFRRTVYKLLSIVQLLMGEIPERNTFSQKQLKIALKPYFHLTEAVRVGDLGSFN 344
Query: 543 EVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLD-SAEDAE 367
+ LE F++D TFTL+ RLR NVIK ++ + +YSRIS DI KL D + +D
Sbjct: 345 QALEQNSDIFKSDQTFTLVQRLRSNVIKAGLKKLNTAYSRISFNDICTKLKFDGTTQDIM 404
Query: 366 FIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMR 187
FI+AK I+DGVI+AT++ GY+ ++E+ D Y T+EP AF RI CL +HN S+KAMR
Sbjct: 405 FIIAKTIKDGVIDATINYEGGYLQSRENIDAYSTQEPLHAFSNRIDICLKIHNDSLKAMR 464
Query: 186 YPP 178
+ P
Sbjct: 465 FHP 467
>UniRef50_Q5AHZ8 Cluster: Likely 26S proteasome regulatory particle
subunit Rpn3p; n=6; Saccharomycetales|Rep: Likely 26S
proteasome regulatory particle subunit Rpn3p - Candida
albicans (Yeast)
Length = 481
Score = 266 bits (651), Expect = 7e-70
Identities = 138/242 (57%), Positives = 171/242 (70%), Gaps = 1/242 (0%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NYL QA LV K FPENA N AR+ YYL RI A +L+YS A++ ++ A+RKA
Sbjct: 208 NYLLTHDISQASDLVEKVEFPENAGNALVARYYYYLARINAIQLDYSTANECVITAIRKA 267
Query: 723 PQTA-AVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRF 547
PQT+ A GF Q KL+IV+ELL+GDIPE +F+ L PYF +T+AVRLG+++ F
Sbjct: 268 PQTSLANGFVQAATKLSIVIELLMGDIPELKVFKNKSGN--LEPYFNVTKAVRLGDIKLF 325
Query: 546 GEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAE 367
GEVL + F+ D FTL+ RLRQNVIKT IR I LSYS+IS KDI KL LDS E E
Sbjct: 326 GEVLHKFEADFKKDDNFTLVSRLRQNVIKTGIRIISLSYSKISLKDICIKLHLDSEESTE 385
Query: 366 FIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMR 187
+IV+KAIRDGVIEA+++ KGYM +KE D+Y T+ PQ F QRI FCL LHN+SVK+MR
Sbjct: 386 YIVSKAIRDGVIEASINHQKGYMQSKELLDVYSTKLPQAEFDQRIKFCLSLHNESVKSMR 445
Query: 186 YP 181
YP
Sbjct: 446 YP 447
>UniRef50_A5K825 Cluster: 26S proteasome non-ATPase regulatory subunit
3, putative; n=6; Plasmodium|Rep: 26S proteasome
non-ATPase regulatory subunit 3, putative - Plasmodium
vivax
Length = 519
Score = 247 bits (604), Expect = 4e-64
Identities = 125/256 (48%), Positives = 175/256 (68%), Gaps = 9/256 (3%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNN-EWARFLYYLGRIKAARLEYSDAHKHLVQALRK 727
+YL ++LYD A K VSK+ FPEN+S+N + AR+LYY+G+I A +L+YS+AH + QA+RK
Sbjct: 233 DYLKHNLYDLAVKFVSKTSFPENSSSNAQHARYLYYIGKILAIQLDYSEAHSKITQAIRK 292
Query: 726 APQT--AAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQ 553
APQ +A GF+ K+ I+VELL+GDIP+R +F +R L PY + AVR G++
Sbjct: 293 APQNIQSAKGFKLEATKMEIIVELLMGDIPDRSLFSNKIMRNKLIPYKHVVTAVRNGDIN 352
Query: 552 RFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRI------SPKDIARKLG 391
RF +V+ +Y F D + LI R+ NVIKTA+R I LSYSRI SP DI +K+G
Sbjct: 353 RFAKVMNDYNQLFMRDGVYLLIKRIHHNVIKTALRIINLSYSRISIVSVGSPSDIGKKIG 412
Query: 390 LDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLH 211
++S D I AKAI DGVIEAT+D Y+ +K +SD+Y T +P FH+RI+FCL L+
Sbjct: 413 VESPLDIVGITAKAIHDGVIEATIDYDNLYVESKSNSDVYITSDPMKTFHKRIAFCLQLY 472
Query: 210 NQSVKAMRYPPKSYGK 163
+ +VKAM+YP ++ K
Sbjct: 473 SDAVKAMQYPDENEKK 488
>UniRef50_Q5KQ43 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 530
Score = 242 bits (593), Expect = 8e-63
Identities = 121/248 (48%), Positives = 173/248 (69%), Gaps = 1/248 (0%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
+YL S Y+QA+KLVSK+ F A+ + R+L+Y GR++A +L Y++A +L A+R+A
Sbjct: 249 SYLANSQYEQAEKLVSKTQFHGAANQAQTVRWLFYTGRLRAIQLNYAEARNYLQTAIRRA 308
Query: 723 PQT-AAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRF 547
P+ A GF Q + K I+V LL G IP+R +FR+ L++ALAPYFQ+ QAVR+G++ F
Sbjct: 309 PKDEVAPGFVQLIHKYFIIVVLLTGVIPDRALFRKPVLKQALAPYFQIVQAVRIGDVAGF 368
Query: 546 GEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAE 367
+ + + F D T LI RLR VIKTA+R+I L+YSRIS D+ KL LDS ED E
Sbjct: 369 QKAFQTHEATFFADSTHFLISRLRHFVIKTALRTITLAYSRISLADVCIKLHLDSEEDTE 428
Query: 366 FIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMR 187
+IVAKAI+DGVI+AT+DP G+M +K + D+Y T EP F +R+ +C ++N+SV+AMR
Sbjct: 429 YIVAKAIKDGVIDATIDPQGGWMQSKVAKDLYETDEPAKQFQKRVQYCTQVYNESVRAMR 488
Query: 186 YPPKSYGK 163
YPP ++ K
Sbjct: 489 YPPDAHRK 496
>UniRef50_A7AT48 Cluster: 26S proteasome non-ATPase regulatory
subunit 3; n=1; Babesia bovis|Rep: 26S proteasome
non-ATPase regulatory subunit 3 - Babesia bovis
Length = 512
Score = 231 bits (566), Expect = 1e-59
Identities = 112/244 (45%), Positives = 165/244 (67%), Gaps = 3/244 (1%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENAS-NNEWARFLYYLGRIKAARLEYSDAHKHLVQALRK 727
N +H+ LY A L+ K+ FPE+ S + ++AR+LYY G I A +LEYS+AH L+QALRK
Sbjct: 229 NLVHHKLYSSAATLLMKTTFPESLSASTQYARYLYYCGNILAVQLEYSEAHNKLMQALRK 288
Query: 726 APQT--AAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQ 553
APQ+ AA GF+ K+A++V LL+GD+P + F +++ L PY ++ V G+L
Sbjct: 289 APQSDNAAFGFKLATTKMAVIVSLLMGDVPSKSTFTNPIMKRNLEPYEEVVITVMNGDLI 348
Query: 552 RFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAED 373
F +V Y F D T LI RLR NVIK +R I L+YSRI + +A+KLG++S E+
Sbjct: 349 EFSKVCGKYKTLFEKDDTMFLISRLRHNVIKGGLRKINLAYSRIPIEKVAQKLGINSVEE 408
Query: 372 AEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKA 193
E I+AKAI DG+IEAT+ + YM +K + ++Y + +P +AF++RI+FCL LH+ +++A
Sbjct: 409 TECIIAKAISDGIIEATIHHEEKYMESKANVNLYTSEQPMMAFNKRINFCLKLHSNAIQA 468
Query: 192 MRYP 181
MRYP
Sbjct: 469 MRYP 472
>UniRef50_Q4N2B3 Cluster: Proteasome regulatory component, putative;
n=2; Theileria|Rep: Proteasome regulatory component,
putative - Theileria parva
Length = 510
Score = 225 bits (549), Expect = 2e-57
Identities = 111/244 (45%), Positives = 161/244 (65%), Gaps = 3/244 (1%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNN-EWARFLYYLGRIKAARLEYSDAHKHLVQALRK 727
N +H+ LY A K + K+ FPE S+N ++AR+LYY G++ + +LEYS+A+ LVQ+LRK
Sbjct: 232 NLIHHKLYSSAFKFICKTTFPEYLSSNAQYARYLYYYGKVLSVQLEYSEAYTKLVQSLRK 291
Query: 726 APQT--AAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQ 553
APQ A GF+ K++++V LL+ DIP + +F +R+ L PY + AVR G+L
Sbjct: 292 APQNDKTAYGFKLLATKMSVIVGLLMCDIPSKSVFTNPSMRRDLTPYESIVVAVRNGDLS 351
Query: 552 RFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAED 373
F ++ + Y F D T LI RLR NVIK +R I L+YS+I+ ++A KLGL S E
Sbjct: 352 VFLQLCDKYARCFVKDDTMFLISRLRDNVIKGGLRKINLAYSKINLANVAHKLGLKSVEH 411
Query: 372 AEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKA 193
E I+AKAI DG+IEA +D +++K + D+Y + EP AFH+RI FCL LH+ +++A
Sbjct: 412 TENIIAKAIHDGIIEAVIDHENQCVNSKVNVDLYKSYEPMRAFHKRIQFCLKLHSNAIQA 471
Query: 192 MRYP 181
MRYP
Sbjct: 472 MRYP 475
>UniRef50_UPI000049A3B2 Cluster: proteasome regulatory subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 473
Score = 221 bits (541), Expect = 2e-56
Identities = 114/238 (47%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Frame = -1
Query: 900 YLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAP 721
YL S Y +K ++KS+ ++ SN + AR+ YYLGRI+ L+YSDA+ L A+RKAP
Sbjct: 206 YLATSQYSVCEKFITKSLINQSVSNQQQARYYYYLGRIQCIHLKYSDAYDSLTTAIRKAP 265
Query: 720 QTA-AVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFG 544
Q A GF V K +V+LL+G+IP R +F Q + KAL PY++LTQAV++G L+ F
Sbjct: 266 QLPKAYGFHVCVTKWLTLVQLLMGEIPRRNVFLQNGMLKALLPYYRLTQAVQVGGLEEFK 325
Query: 543 EVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEF 364
+V+E + F D T L++R+RQNVIKTAIR I +SYSRI +I +KL LDS ED EF
Sbjct: 326 KVVEEFKDWFTEDKTNGLVIRIRQNVIKTAIRKIYVSYSRIGLSEIQKKLQLDSVEDTEF 385
Query: 363 IVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAM 190
IVAK I+D VI+A +D + K + DIY T EPQ+ RI C+ L KAM
Sbjct: 386 IVAKCIQDNVIDAVIDHENQILIGKNTLDIYTTNEPQIILENRIRGCMQLQRDIEKAM 443
>UniRef50_A3KFN0 Cluster: Proteasome (Prosome, macropain) 26S
subunit, non-ATPase, 3; n=1; Mus musculus|Rep:
Proteasome (Prosome, macropain) 26S subunit, non-ATPase,
3 - Mus musculus (Mouse)
Length = 221
Score = 214 bits (523), Expect = 2e-54
Identities = 111/185 (60%), Positives = 134/185 (72%), Gaps = 24/185 (12%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
NYLHYSLYDQA+KLVSKSVFPE A+NNEWAR+LYY GRIKA +LEYS+A + + ALRKA
Sbjct: 37 NYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKA 96
Query: 723 PQTAAVGFRQT------------------------VQKLAIVVELLLGDIPERVIFRQAP 616
PQ AVGF+QT V KL IVVELLLG+IP+R+ FRQ
Sbjct: 97 PQHTAVGFKQTSPGTVFSLAHGCAPPTVLLSRPMQVHKLLIVVELLLGEIPDRLQFRQPS 156
Query: 615 LRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGL 436
L+++L PYF LTQAVR GNL +F +VL+ +G +F+ D T+TLI+RLR NVIKT +R I L
Sbjct: 157 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISL 216
Query: 435 SYSRI 421
SYSRI
Sbjct: 217 SYSRI 221
>UniRef50_A0BUN6 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 484
Score = 213 bits (520), Expect = 5e-54
Identities = 112/249 (44%), Positives = 155/249 (62%), Gaps = 2/249 (0%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKA 724
N++HY+ Y+Q+ + K+ FPE+A N+ ARFLYY G I A R EY +A+K+L QA KA
Sbjct: 216 NFIHYNQYEQSYNFLKKTEFPEHAFGNQQARFLYYTGLIHAIRGEYQEAYKNLTQASHKA 275
Query: 723 PQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFG 544
P A GF+ K+ +VELLLG++P R F ++AL PY+++ V GNL F
Sbjct: 276 PDNTAFGFKVQAIKVIALVELLLGNVPNRDTFTSPEYQQALYPYYRIVSTVIKGNLGEFQ 335
Query: 543 EVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEF 364
+ + R D F LI RL Q VIK +R I LSYSRIS DI KL L + +AE
Sbjct: 336 QEVARSENILRRDKLFNLIQRLPQIVIKAGLRRINLSYSRISLSDIHEKLNLPAQCNAEQ 395
Query: 363 IVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRY 184
+VAKAIRDG + A +D + KE++D+Y T+ PQ A+ +RI+ CL L+NQ+VKA++Y
Sbjct: 396 VVAKAIRDGTLAAVIDHENQIVITKETNDLYGTKAPQEAYGERINNCLGLYNQAVKALQY 455
Query: 183 --PPKSYGK 163
P YG+
Sbjct: 456 QNPEYDYGE 464
>UniRef50_Q4P9G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 601
Score = 210 bits (514), Expect = 3e-53
Identities = 108/186 (58%), Positives = 131/186 (70%), Gaps = 3/186 (1%)
Frame = -1
Query: 711 AVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLE 532
A GF QT K +VVELL+G+IPER IFR LRKALAPY ++ QAVR+G+LQRF L+
Sbjct: 384 AAGFLQTAYKFLVVVELLMGEIPERSIFRTPVLRKALAPYMEIVQAVRVGDLQRFQSTLQ 443
Query: 531 NYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEFIVAK 352
+ F+ D T +LI+RLR NVIKT IR I LSYSRIS DI KL L+S EDAE+IVAK
Sbjct: 444 QHTTLFQTDKTLSLIVRLRHNVIKTGIRMISLSYSRISLADITHKLHLESEEDAEYIVAK 503
Query: 351 AIRDGVIEA---TLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRYP 181
AIRD V+++ +D K M N+E+ D+Y T EP F QRI FCL LHN+SVKAMRYP
Sbjct: 504 AIRDNVVDSRDTRVDHEKAEMVNRETKDLYETDEPMQQFQQRIQFCLQLHNESVKAMRYP 563
Query: 180 PKSYGK 163
+ K
Sbjct: 564 LNGHKK 569
Score = 74.9 bits (176), Expect = 3e-12
Identities = 34/60 (56%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -1
Query: 888 SLYDQADKLVSKSVFPEN-ASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTA 712
+LYDQADKLV+++ FP + ASN + AR+ YY+GRI+A +L+Y+ AH HL QA+R+APQ +
Sbjct: 281 NLYDQADKLVARAPFPRSSASNPQVARYDYYVGRIRAVQLDYTQAHVHLQQAIRRAPQAS 340
>UniRef50_A4HFS3 Cluster: Proteasome regulatory non-ATP-ase subunit
3,putative; n=5; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit 3,putative - Leishmania
braziliensis
Length = 334
Score = 210 bits (512), Expect = 5e-53
Identities = 109/234 (46%), Positives = 152/234 (64%), Gaps = 1/234 (0%)
Frame = -1
Query: 882 YDQADKLVSK-SVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAV 706
++QA+ ++ ++ + +NN+ AR+ YY+G +A RLEY DAH+ L QALRKAP+ A
Sbjct: 60 HEQAEAFIATCNITLPHRANNQAARYFYYVGLTRALRLEYVDAHQCLQQALRKAPERA-F 118
Query: 705 GFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENY 526
GFR KL++VV+LLLG+IP R F +R +LAPY QL VR G + RF VL +
Sbjct: 119 GFRIATTKLSLVVQLLLGEIPPRSDFLAKDMRDSLAPYLQLASCVRFGQVDRFMTVLREH 178
Query: 525 GPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEFIVAKAI 346
F +D T +LILR+ Q+VIKT +R I +YSRIS D+ KL + + DAE+I++KAI
Sbjct: 179 QVTFEHDRTHSLILRVHQHVIKTGLRRICQAYSRISISDVCSKLAMSNVSDAEYILSKAI 238
Query: 345 RDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRY 184
DGVI+A LD KG + + +S D+Y T EP A +RI F HN + +AMRY
Sbjct: 239 HDGVIDAVLDNEKGELISSDSIDVYSTSEPLYALQRRIQFLNLTHNDAKRAMRY 292
>UniRef50_P40016 Cluster: 26S proteasome regulatory subunit RPN3;
n=5; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 203 bits (495), Expect = 6e-51
Identities = 100/243 (41%), Positives = 158/243 (65%), Gaps = 2/243 (0%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPE-NASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRK 727
++L+ D A +SK +P + S++ AR+ +YL +I A +L+YS A+++++ A+RK
Sbjct: 240 DFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299
Query: 726 APQTA-AVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQR 550
AP + ++GF Q KL ++LL+GDIPE F Q+ ++K+L PY+ LT+AV+L +L++
Sbjct: 300 APHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLSDLKK 359
Query: 549 FGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDA 370
F + Y D T+ L +RLR NVIKT IR I L+Y +IS +DI KL LDS +
Sbjct: 360 FTSTITKYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTV 419
Query: 369 EFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAM 190
E++V++AIRDGVIEA ++ G++ E +IY + +PQ F +RI F LH++ + +M
Sbjct: 420 EYMVSRAIRDGVIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIKFANQLHDEYLVSM 479
Query: 189 RYP 181
RYP
Sbjct: 480 RYP 482
>UniRef50_Q5CVH2 Cluster: 26S proteasomal subunit S3; PINT domain
containing protein; n=2; Cryptosporidium|Rep: 26S
proteasomal subunit S3; PINT domain containing protein -
Cryptosporidium parvum Iowa II
Length = 551
Score = 186 bits (453), Expect = 7e-46
Identities = 100/245 (40%), Positives = 147/245 (60%), Gaps = 4/245 (1%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKSVFPENASNN-EWARFLYYLGRIKAARLEYSDAHKHLVQALRK 727
NY+ YD K + K V+PEN S+ AR+LYY GRI +A+LEY A Q+LRK
Sbjct: 272 NYVLTKRYDLGLKALEKMVYPENLSSGIHQARYLYYSGRIYSAQLEYQSAFNSFTQSLRK 331
Query: 726 APQTAAVG---FRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNL 556
PQT G F +VQK AIVV++L+G++P+R IF LRK L PY +L +AVR G++
Sbjct: 332 TPQTKGRGSLNFALSVQKFAIVVQMLMGEVPDRSIFNSTDLRKGLVPYLELVKAVRSGDM 391
Query: 555 QRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAE 376
+ F L+ G + D T +LI RL NVI++ +++I SY+RI DIA+ G D++
Sbjct: 392 KEFDLNLQKRGKIYERDGTLSLIKRLAHNVIRSGLKTICSSYNRIYLDDIAKYFGWDNSH 451
Query: 375 DAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVK 196
D E +V+KAI D V++A ++ + ++ + Y + H RI+F L L + ++K
Sbjct: 452 DVEGVVSKAILDKVVDAKINDDIKCLESQHKCETYGSESMLNNLHSRIAFSLLLRSNAIK 511
Query: 195 AMRYP 181
AM YP
Sbjct: 512 AMEYP 516
>UniRef50_O95325 Cluster: Proteasome subunit p58; n=4; Mammalia|Rep:
Proteasome subunit p58 - Homo sapiens (Human)
Length = 115
Score = 128 bits (308), Expect = 3e-28
Identities = 61/98 (62%), Positives = 71/98 (72%)
Frame = -1
Query: 363 IVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRY 184
++AKAIRDGVIEA+++ KGY+ +KE DIY TREPQLAFHQRISFCLD+HN SVKAMR+
Sbjct: 18 LLAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRF 77
Query: 183 PPKSYGKXXXXXXXXXXXXXXXXXXAKEMAEEDDDGFP 70
PPKSY K AKEMAE+DDD FP
Sbjct: 78 PPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSFP 115
>UniRef50_A2D9L4 Cluster: PCI domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: PCI domain containing
protein - Trichomonas vaginalis G3
Length = 389
Score = 111 bits (267), Expect = 2e-23
Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 4/211 (1%)
Frame = -1
Query: 906 ENYLHYSLYDQADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRK 727
+ Y+ Y A + FP +AS + R+ +++G +KA LEY++A HL +LR+
Sbjct: 152 KRYIDIGGYSLALSFLKHCNFPSDASPAQLGRYHFFVGHLKAITLEYAEAQYHLQLSLRR 211
Query: 726 APQTA-AVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQR 550
APQ + FR V + +VV +L G +P R + P+ Y L +++ G++
Sbjct: 212 APQNRYSAQFRGLVTRHLMVVMMLQGQVPSRSMLLDTPV------YLDLARSILKGDVIA 265
Query: 549 FGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDA 370
F EV + +F D L+ RLR +VI + I YSRIS DIA L + SAEDA
Sbjct: 266 FQEVASS--KEFEEDGLAPLVQRLRSSVILAGLTMIAHCYSRISFADIAEFLHIGSAEDA 323
Query: 369 EFIVAKAIRDGVIEATLDPVKG---YMSNKE 286
E AKA DG+I+A ++ G MS KE
Sbjct: 324 EGFCAKAAADGLIDAVIEHENGCLISMSGKE 354
>UniRef50_Q8SRT7 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 3; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 3 - Encephalitozoon cuniculi
Length = 376
Score = 74.9 bits (176), Expect = 3e-12
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 4/234 (1%)
Frame = -1
Query: 870 DKLVSKSVFP--ENA--SNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVG 703
D L+ +F +N+ + +E AR+ YY G I +Y A K + + V
Sbjct: 144 DMLIGNKIFQRIDNSIVTTSEQARYNYYNGIIFMVEGDYESALKCFHTCVILSTNRDLV- 202
Query: 702 FRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYG 523
+K I+ LL D P + +L YF+L AV+ ++++F E LE+
Sbjct: 203 --LGAEKRVILCMLLSSDYSIPY-----PCKPSLRIYFKLASAVKRADIKKFEETLESNK 255
Query: 522 PQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEFIVAKAIR 343
+ + + + RL QNVI+ IR I + YSRIS +DIA LG++S E E++V + IR
Sbjct: 256 DELMSQGLYFVAKRLSQNVIQEGIRKISVVYSRISYEDIAHILGINSGE-VEYLVKRTIR 314
Query: 342 DGVIEATLDPVKGYMSNKESSDIYCTREPQLAFHQRISFCLDLHNQSVKAMRYP 181
G+I+ + Y ++ S + I C+ L N + MRYP
Sbjct: 315 KGLIKGKVADGIFYSLREDKS--------KTDIGIGIRDCIQLANYIQEHMRYP 360
>UniRef50_Q4N5D2 Cluster: Putative uncharacterized protein; n=3;
Piroplasmida|Rep: Putative uncharacterized protein -
Theileria parva
Length = 424
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/121 (28%), Positives = 61/121 (50%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVI 631
F YYLG++ + EY ++ +HL A + V R+ + + IVV L LG +P +
Sbjct: 232 FRYYLGKLHMQKEEYIESEEHLSWAFSNCLKDN-VKMRRHILECLIVVRLGLGKMPPEYL 290
Query: 630 FRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAI 451
+ L Y ++ +++ LG+++RF L+NY F + T + +L+ +T I
Sbjct: 291 LE----KYNLTHYSEIVKSIVLGDVERFNNTLDNYFEDFIKEGTILCVEQLKFLAYRTLI 346
Query: 450 R 448
R
Sbjct: 347 R 347
>UniRef50_A2YQQ1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 771
Score = 53.2 bits (122), Expect = 9e-06
Identities = 31/118 (26%), Positives = 58/118 (49%)
Frame = -1
Query: 624 QAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRS 445
Q L+ Y L+ GN E ++ +F++D+ L+ ++ ++ K I+
Sbjct: 593 QRNLKNHAQVYVDLSTCYSKGNYSELEEYIQLNAEKFQSDNNLGLVKQVLSSMYKRNIQR 652
Query: 444 IGLSYSRISPKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIY 271
+ +Y +S +DIA + L + ++AE V + I DG I AT++ G +S E + Y
Sbjct: 653 LTQTYLTLSLEDIASSVQLKTPKEAEMHVLRMIEDGEIHATINQKDGMVSFHEDPEQY 710
>UniRef50_Q00WB4 Cluster: COP9 signalosome, subunit CSN3; n=1;
Ostreococcus tauri|Rep: COP9 signalosome, subunit CSN3 -
Ostreococcus tauri
Length = 172
Score = 50.4 bits (115), Expect = 6e-05
Identities = 27/97 (27%), Positives = 49/97 (50%)
Frame = -1
Query: 594 YFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRISP 415
Y L + L +L++ E +E Y + D L+ LR+ V +R++ +YS++S
Sbjct: 8 YDALVSVMSLTSLEKLNETIEKYQTAYEEDGNAGLVDLLRERVQIDRVRAVAKTYSKLSL 67
Query: 414 KDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKG 304
+ AR L L A AE ++ + G ++A++D G
Sbjct: 68 SEFARLLDLTDAAHAETMLHGMVSRGEVDASVDGTLG 104
>UniRef50_A4S136 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 346
Score = 48.8 bits (111), Expect = 2e-04
Identities = 35/152 (23%), Positives = 69/152 (45%)
Frame = -1
Query: 825 NEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDI 646
+E + +Y+GR+ Y A +HL A +A R +Q L I V+L+LG +
Sbjct: 145 SEKVTYNFYVGRLAVFEDAYERAAEHLEYAFAHCHAQSARNVRLILQYL-IPVKLILGTL 203
Query: 645 PERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNV 466
P R + + LR+ + + +A+R G+ + L + F T+ ++ +LR +V
Sbjct: 204 PSRKLLEKYELRE----FVDVVEAMRRGDARTLDAALSDGESTFIKQGTYLILEKLRMSV 259
Query: 465 IKTAIRSIGLSYSRISPKDIARKLGLDSAEDA 370
+T + + + + A ++ L + A
Sbjct: 260 YRTLFKKVHAIHGETADAAKANQVSLAKFQTA 291
>UniRef50_A3LPN7 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 440
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Frame = -1
Query: 831 SNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLG 652
S NE ++ YYL + + + D++ H + + P T+ + + L + + L++G
Sbjct: 219 SKNEQVQYRYYLAKFYLIKQQIIDSYDHFLWCMLNCPSTSTSNINRILNYL-LPLSLIIG 277
Query: 651 DIP-----ERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGE-VLENYGPQFRNDHTFTL 490
+P +V ++ P Y +L+ A++ GN F + V+ENY Q+ D L
Sbjct: 278 KVPNFQYISQVYYQHTPPPPFFNIYMRLSAAIKSGNFLLFNDVVVENY--QYLQDANVLL 335
Query: 489 ILRLRQNVI 463
+L + VI
Sbjct: 336 LLINKSKVI 344
>UniRef50_UPI00015B42AC Cluster: PREDICTED: similar to COP9
constitutive photomorphogenic homolog subunit 3; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to COP9
constitutive photomorphogenic homolog subunit 3 -
Nasonia vitripennis
Length = 441
Score = 48.0 bits (109), Expect = 3e-04
Identities = 42/210 (20%), Positives = 86/210 (40%), Gaps = 5/210 (2%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGD----IP 643
+ YY G I A Y D + + P A K I+V L+L +P
Sbjct: 186 YFYYGGMIYTALKNY-DRALYFFEVCVMTPAAAVSHIMLEAYKKFILVSLILNGKILLLP 244
Query: 642 ERVI-FRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNV 466
+ +++ APY +L A + + +++ Y + D+ L+ ++ +
Sbjct: 245 NYTSNLVKRHIKRLSAPYQELATAYGTHSCEEVEDIILKYNDVYARDNNTGLVQQVLSFL 304
Query: 465 IKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSNKE 286
K I+ + ++ +S D+A ++ L DAE + I DG I AT++ G + +
Sbjct: 305 YKKNIQRLTNTFLTLSLTDVAARVKLPGPADAEKYILNMIEDGEIFATINQKDGMVIFHD 364
Query: 285 SSDIYCTREPQLAFHQRISFCLDLHNQSVK 196
+ Y + + ++ C +L + ++
Sbjct: 365 DPEKYDSPRMLAKLEKEMAECAELGRKVIE 394
>UniRef50_A0CW78 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_3,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 422
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = -1
Query: 870 DKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQT-AAVGFRQ 694
DK+ + + + + YY GRI ++ DA +HL Q L++ P+T + +
Sbjct: 205 DKVEKEQNLLFTSPKQDQVTYHYYKGRILIFHSKFVDASQHLTQVLQECPRTQKGISCAK 264
Query: 693 TVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENY 526
V K I + + +G P++ + Q Y QL VR GN+ E ++ Y
Sbjct: 265 QVLKYLIPINMFMGRYPKKELIEQ------FKEYDQLCTCVRQGNIAGLQEAIDKY 314
>UniRef50_UPI000023F272 Cluster: hypothetical protein FG05086.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05086.1 - Gibberella zeae PH-1
Length = 529
Score = 47.6 bits (108), Expect = 4e-04
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVI 631
FLYYLGR + Y A L QA + P + V R + I +LLG P +++
Sbjct: 240 FLYYLGRFNFSNNHYLRAALCLEQAYLQTP-SQLVSHRTNILTYLIPCNILLGRFPSQLL 298
Query: 630 FRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGP-QFRNDHTFTLILRLRQNVIKTA 454
++ + +F + QA+R GN +F L + F TL RLR + ++
Sbjct: 299 LQRQECKDLGPVFFPICQAIRSGNFIQFQHHLAQHETWLFEKGLLLTLSSRLRPLLWRSL 358
Query: 453 IRSIGLSYSRISPKDIARK 397
R L + I P D + +
Sbjct: 359 SRKTFL-LTYIPPTDASSR 376
>UniRef50_A7SPX9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 379
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/96 (31%), Positives = 54/96 (56%)
Frame = -1
Query: 597 PYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSIGLSYSRIS 418
P +QL Q G++Q + + ++ F N + + L++ + T + SIG IS
Sbjct: 238 PIYQLLQIFVSGDVQDYKKFYDS-NTDFINSIGLSHEMNLKKMRVLT-LMSIGKETDEIS 295
Query: 417 PKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPV 310
+D+A KLG+ S E +F++ +AI+ G+++A LD V
Sbjct: 296 YEDLATKLGISSDEIEQFLI-EAIQTGLVKARLDQV 330
>UniRef50_Q8W575 Cluster: COP9 signalosome complex subunit 3; n=7;
Magnoliophyta|Rep: COP9 signalosome complex subunit 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 429
Score = 44.8 bits (101), Expect = 0.003
Identities = 29/122 (23%), Positives = 53/122 (43%)
Frame = -1
Query: 624 QAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRS 445
Q + PY +L G + ++ +F D L+ + ++ K I
Sbjct: 250 QRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYKRNILR 309
Query: 444 IGLSYSRISPKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCT 265
+ Y +S +DIA + L +A++AE V + I+DG I A ++ G + E + Y +
Sbjct: 310 LTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDPEQYKS 369
Query: 264 RE 259
E
Sbjct: 370 SE 371
>UniRef50_Q5CNP2 Cluster: PINT domain protein (Proteasomal subunit)
PFB0240w; n=2; Cryptosporidium|Rep: PINT domain protein
(Proteasomal subunit) PFB0240w - Cryptosporidium hominis
Length = 425
Score = 44.4 bits (100), Expect = 0.004
Identities = 29/123 (23%), Positives = 61/123 (49%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVI 631
F Y+LG++ + + A + L+ A + + + ++ + + I V+ LG IP +
Sbjct: 232 FCYFLGKLYMQQDRFVLAEEQLIWAFGNSGKNNQL--KRNILECLIPVKFRLGFIPNISL 289
Query: 630 FRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVIKTAI 451
++ L YF++++A+ GN++RF +E Y F N T I +++ + + +
Sbjct: 290 LKKYNLEH----YFEISKAILQGNIKRFDAAIEKYSSLFINHGTILCIEKVKFILYRNLM 345
Query: 450 RSI 442
R I
Sbjct: 346 RRI 348
>UniRef50_Q2PQ76 Cluster: COP9 signalosome complex subunit 3; n=2;
Dictyostelium discoideum|Rep: COP9 signalosome complex
subunit 3 - Dictyostelium discoideum (Slime mold)
Length = 418
Score = 42.7 bits (96), Expect = 0.013
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYS---DAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPE 640
+ YY G I A +Y +A K ++ A A V + +K IV + G +
Sbjct: 176 YFYYSGIIFTAFKKYKKAIEAFKFVITAPASALSAITV---EAYKKYLIVYLIQFGSVQH 232
Query: 639 ----RVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQ 472
Q ++ PY + Q+ GN+ + F+ D + L+ +
Sbjct: 233 FPKCTPAVVQRNIKSHCKPYTEFVQSFSNGNINDIMNKASSGAEFFQKDSNWGLVKLSIK 292
Query: 471 NVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSN 292
+ + I+ + ++ +S DIA K+ L A+ AE V K I +G I AT++ G ++
Sbjct: 293 STYRRNIKKLTQTFMTLSINDIAEKVSLPKAK-AEQFVLKMIEEGEIFATINQKDGMVTF 351
Query: 291 KE 286
E
Sbjct: 352 DE 353
>UniRef50_Q6BWF2 Cluster: Similar to CA4976|IPF4708 Candida albicans
IPF4708 unknown function; n=2; Saccharomycetaceae|Rep:
Similar to CA4976|IPF4708 Candida albicans IPF4708
unknown function - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 473
Score = 42.7 bits (96), Expect = 0.013
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Frame = -1
Query: 825 NEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDI 646
NE ++ +YLGR + + DA+ HL+ L++ P A + + I + + +G
Sbjct: 226 NEQIQYRFYLGRFYFLKNQLVDAYTHLLWCLQRCPVVADSSNITRILQYLIPISIAIGKR 285
Query: 645 PERVIFRQ------APLRKALAPYFQLTQAVRLGNLQRFGEVLENYGP-QFRNDHTFTLI 487
P +Q + A Y L+QAV LGN F + N F D ++
Sbjct: 286 PNFNFLQQMYYSSPSTTPSFFAIYLDLSQAVSLGNYAHFYTTITNPSVYSFLKDADLLVL 345
Query: 486 LRLR--QNVIKTAIRSIGLSYSRISPKDI-ARKLGLDSA 379
L + V++ I+ + + ++ D + KLGL ++
Sbjct: 346 LSSKCVLLVVRNLIKRLWMLAGKVPKLDYDSIKLGLSAS 384
>UniRef50_UPI000049A2D6 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 314
Score = 41.1 bits (92), Expect = 0.038
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Frame = -1
Query: 903 NYLHYSLYDQADKLVSKS--VFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALR 730
NYLH ++ Q D +S + + E+ + + + + YY G + + SDA HL +A+
Sbjct: 98 NYLH--IFSQMDDFLSSAQHLIKEDTTRSMYCMYHYYAGMTMLIKNKPSDALIHLTEAIN 155
Query: 729 KAPQTAAVGFRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQR 550
P + +R+T+ L IV+ L G+ P + + L + + L +V G++
Sbjct: 156 YIPADSP-NYRKTLIPL-IVLHLRKGEYPPQQLLSTHHLEE---EFTNLILSVERGDVVL 210
Query: 549 FGEVLENYGPQFRNDHTFTLILRLRQNVIKTAIRSI--GLSYSRISPKDIARKLGL---- 388
+ + + F + F L+ L+ V + + L+ ++I L +
Sbjct: 211 YENEIRKHEAFFIHHGLFLLVESLKLIVYRNLFDLVQKSLNTNKILYSAFQNALSVFGKT 270
Query: 387 DSAEDAEFIVAKAIRDGVIEATL 319
S + EFIVA + G+++ +
Sbjct: 271 CSETELEFIVANMVYKGLMKCQI 293
>UniRef50_A4RJQ3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 590
Score = 40.3 bits (90), Expect = 0.067
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVI 631
+LYYLG + Y A L +A R+ P+ R+ V I +L G +P +
Sbjct: 239 YLYYLGLVMFQSDHYPRAAAALDEAYRQLPKHLTKQ-RRLVLTFLIPANILSGRLPSDTL 297
Query: 630 FRQAPLRKALAPYFQ-LTQAVRLGNLQRFGEVLENYGP-QFRNDHTFTLILRLRQNVIKT 457
Q P + LAP F+ + A+R GN F + L + + F L+ R R + ++
Sbjct: 298 L-QRPEAEQLAPIFRPMAMAIRKGNFAAFQQGLNTHQAWLLERNLLFPLMYRARPLLWRS 356
Query: 456 AIRSIGL 436
R + L
Sbjct: 357 LTRRVFL 363
>UniRef50_Q582U5 Cluster: COP9 signalosome complex subunit 2,
putative; n=2; Trypanosoma|Rep: COP9 signalosome complex
subunit 2, putative - Trypanosoma brucei
Length = 440
Score = 38.7 bits (86), Expect = 0.20
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Frame = -1
Query: 603 LAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLR-QNVIKTAIRSIGLSYS 427
+ P+ L +A R ++QRF + F + + L L N+ A+ + Y
Sbjct: 299 IVPFSGLVKAYRRNDVQRFLSTADLVRQCFTAEPAVLVCLDLLLDNLRLRALVAFASPYE 358
Query: 426 RISPKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREPQLA 247
R+S + + L +D ++ + + +A+ +GV+ A LD G + S++ E LA
Sbjct: 359 RLSMQRLQSVLLVDK-DEVDRLCLRAVSEGVLRAKLDNENGVVIMNGESEVGPETERLLA 417
Query: 246 FHQRISFCLDLHNQSVK 196
F + ++ + + +S K
Sbjct: 418 FDRWVNALHEFNKRSYK 434
>UniRef50_Q54PX7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 430
Score = 37.9 bits (84), Expect = 0.36
Identities = 26/146 (17%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Frame = -1
Query: 867 KLVSKSVFP--ENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQ 694
K + FP E+ N+ + ++ GR+ +Y A + L+ A K P ++ ++
Sbjct: 224 KTMESPGFPTLESYPLNQVITYRFFNGRLSVFNGQYKKAQEELLYAFNKCPND-SIKNKR 282
Query: 693 TVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQF 514
+ + ++L P++ + + L + + + Q+++ GN+++F E L + F
Sbjct: 283 LILLFLVPMQLEQCKFPKKSLLEKFKLTQ----FIDIVQSIKSGNIKQFNECLSTHQNFF 338
Query: 513 RNDHTFTLILRLRQNVIKTAIRSIGL 436
+ + ++ +L+ V + + + L
Sbjct: 339 ISKGIYLILEKLKIIVYRNLFKKVHL 364
>UniRef50_Q6C3I5 Cluster: Similar to AAH45415 Danio rerio Similar to
COP9 constitutive photomorph; n=1; Yarrowia
lipolytica|Rep: Similar to AAH45415 Danio rerio Similar
to COP9 constitutive photomorph - Yarrowia lipolytica
(Candida lipolytica)
Length = 403
Score = 36.3 bits (80), Expect = 1.1
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Frame = -1
Query: 834 ASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRK-APQTAA----VGFRQTVQ-KLAI 673
A+ N+ A F +Y + A E+ A L A+ A QT V F + + L++
Sbjct: 161 ATRNDLALFHFYGALVYIAYKEWEKADDFLAIAIEAGATQTTTRPWIVRFAYSRRILLSL 220
Query: 672 VVELLLGDIPERVIFRQAPLRKALA----PYFQLTQAVRLGNLQRFGEVLENYGPQFRND 505
++ L IP +P LA PY L A + ++F + E F+N+
Sbjct: 221 IMGTPLPKIPNPNSSEVSPSDDLLARDCHPYHALALAAHSSDPKQFVQTTEAQMETFKNE 280
Query: 504 HTFTLILRLRQNVIKTAIRSIGLSYSRISPKDIA 403
T+ L++ R + +R +YSR+ KD++
Sbjct: 281 GTWQLVVTARLCFLHGQLRESHKAYSRVPLKDVS 314
>UniRef50_UPI0000E4A144 Cluster: PREDICTED: similar to COP9
constitutive photomorphogenic homolog subunit 3,
partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to COP9 constitutive photomorphogenic
homolog subunit 3, partial - Strongylocentrotus
purpuratus
Length = 164
Score = 35.5 bits (78), Expect = 1.9
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -1
Query: 435 SYSRISPKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGYMSNKESSDIYCTREP 256
++ +S DIAR++ L + ++AE V I DG I AT+ G + ++ + Y
Sbjct: 71 TFLTLSLSDIARRVYLHAPQEAEQYVRNMIEDGEIHATISKQNGMVHFHDNPEKYDNPAV 130
Query: 255 QLAFHQRISFCLDL 214
Q++ C+ L
Sbjct: 131 LRHVEQQMQHCISL 144
>UniRef50_A0BZR7 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_14, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2670
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 182 HQNHTEKNWKVLRNAVKENSKIWNLPKKWQRKMMMVS 72
H T K W L N KENS W + K +QR+++M+S
Sbjct: 2456 HFERTRKIWGYLFNDYKENSYYWEIIKIFQREVIMLS 2492
>UniRef50_UPI00006CC900 Cluster: HT004 protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: HT004 protein,
putative - Tetrahymena thermophila SB210
Length = 317
Score = 34.7 bits (76), Expect = 3.3
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIPERVI 631
F+YY GR++ + A L AL + P A RQ + K I V + G P +
Sbjct: 124 FMYYFGRLQIFSQNFKQASTCLQYALDRCPADAFKQRRQ-ILKYLIPVNMYCGKFPTSQL 182
Query: 630 FRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENY 526
+ + L Y L A+ GN+++ E E +
Sbjct: 183 IK----KYELFEYSDLAIAILEGNMKKLEEQREKW 213
>UniRef50_UPI000049857B Cluster: PCI domain protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: PCI domain protein -
Entamoeba histolytica HM-1:IMSS
Length = 429
Score = 34.7 bits (76), Expect = 3.3
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Frame = -1
Query: 591 FQLTQAVRLGNLQRFGEVLENYGPQFRNDHTF--TLILRLRQNVIKTAIRSIGLSYSRIS 418
+QL A N+ F E L G QF+ DH + I L + K I + + RI+
Sbjct: 303 YQLYCAFNENNIIHFKEALNKSGSQFK-DHPYIQQYIPLLIETAQKNLILKLVKCFKRIN 361
Query: 417 PKDIARKLGLDSAEDAEFIVAKAIRDGVIEATLDPVKGY--MSNKESS 280
+A++L + E E +V + I D ++A ++ Y M+ ++SS
Sbjct: 362 FSFLAQELDM-KEEKVELLVLRMIFDNTLKAKINQFDRYLIMTEEQSS 408
>UniRef50_A0C026 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1683
Score = 34.7 bits (76), Expect = 3.3
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 796 KVVQKSCPLIVAGIFRKN*LTY*FISLIIQRVVQVIF 906
KV++K + + G+ RKN TY +ISLII+ +VQ ++
Sbjct: 198 KVMEKPITMKIQGLERKNISTYRYISLIIEFIVQFLY 234
>UniRef50_Q1MLL8 Cluster: Putative ROK family transcriptional
regulator; n=1; Rhizobium leguminosarum bv. viciae
3841|Rep: Putative ROK family transcriptional regulator
- Rhizobium leguminosarum bv. viciae (strain 3841)
Length = 404
Score = 34.3 bits (75), Expect = 4.4
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1
Query: 483 RLRQNVIKTAIRSIGLSYSRISPKDIARKLGLDSAEDAEFIVAKAIRDGVIE 328
R+RQN I A+++I ++ +S D+ARKLG++ + E IVA+ G ++
Sbjct: 13 RIRQNNIVAALQTI-YAHRSLSRADLARKLGMNRSSSGE-IVAELTEGGFVQ 62
>UniRef50_Q756Q1 Cluster: AER203Cp; n=1; Eremothecium gossypii|Rep:
AER203Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 458
Score = 34.3 bits (75), Expect = 4.4
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Frame = -1
Query: 822 EWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQKLAIVVELLLGDIP 643
E + Y LGR + SDA L++A + A +V +L +P
Sbjct: 219 EQVEYRYLLGRYYLSSYRISDAFAQLLRAFQDLCALARAAQAPVPVLQRNMVRVLRYLVP 278
Query: 642 ERVIFRQAP---LRKALAP-----YFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLI 487
+I + P L ++LAP Y +L A++ GNLQ + L ++ + R L+
Sbjct: 279 AGIILGRPPPFALLESLAPALGRSYSELIHALKTGNLQAMHQWLRSHEDELRRRRLLLLM 338
Query: 486 L 484
L
Sbjct: 339 L 339
>UniRef50_A7TN59 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 403
Score = 34.3 bits (75), Expect = 4.4
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -1
Query: 690 VQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFR 511
+ K + V L++ +P+ I + + A Y +L+ VR GN++ L+ Y + R
Sbjct: 294 ILKYLVPVGLMMNKLPKFWIVSKIDVNLA-NKYKELSDCVRTGNIKGLNGWLKLYEAELR 352
Query: 510 NDHTFTLIL-RLRQNVIKTAIRSIGLSYS 427
DH +++ +L + IR + L Y+
Sbjct: 353 KDHLLLILIEKLPMLTYRYLIRKVVLEYT 381
>UniRef50_Q3SUF6 Cluster: RecA-family ATPase; n=1; Nitrobacter
winogradskyi Nb-255|Rep: RecA-family ATPase -
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Length = 743
Score = 33.9 bits (74), Expect = 5.8
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 423 ISPKDIARKLGLDSAEDAEFIVAKAIRDGVI 331
++P D+ KLGL+S + ++AKA +DG +
Sbjct: 444 VAPADLRGKLGLNSGSERPLVIAKATKDGAV 474
>UniRef50_Q44P31 Cluster: Zinc-containing alcohol dehydrogenase
superfamily; n=3; Chlorobiaceae|Rep: Zinc-containing
alcohol dehydrogenase superfamily - Chlorobium limicola
DSM 245
Length = 421
Score = 33.9 bits (74), Expect = 5.8
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = -1
Query: 642 ERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLENYGPQFRNDHTFTLILRLRQNVI 463
ER ++ LR L P F L + R G + F E+L+N P ND+T R++ V+
Sbjct: 53 ERKEYKICFLRLLLKPVFPLQEVCRTGRIYVFIELLQNSLPHGINDYT-----RMKALVL 107
Query: 462 KTAIRSIGL 436
K RS+GL
Sbjct: 108 KEP-RSLGL 115
>UniRef50_Q7RXP7 Cluster: Putative uncharacterized protein
NCU00161.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU00161.1 - Neurospora crassa
Length = 970
Score = 33.9 bits (74), Expect = 5.8
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 750 HLVQALRKAPQTAAVG-FRQTVQKLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQA 574
H R AP ++ R+TV L ++E L GDI +R + LR A PY QL
Sbjct: 403 HSTDGTRSAPGPSSHRPSRETVHPLDAILETLTGDIVVMGGYRGSILRSAEPPYRQLWVP 462
Query: 573 VRLG 562
V++G
Sbjct: 463 VKVG 466
>UniRef50_UPI000038DBEA Cluster: COG0457: FOG: TPR repeat; n=1;
Nostoc punctiforme PCC 73102|Rep: COG0457: FOG: TPR
repeat - Nostoc punctiforme PCC 73102
Length = 772
Score = 33.5 bits (73), Expect = 7.7
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = -1
Query: 876 QADKLVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFR 697
+ +KL+ ++ PE + +YY G+I +Y A QAL +A Q
Sbjct: 624 EEEKLLKQASLPELKIKEQQVHIIYYQGQIHFQSGDYQQAENVFQQALAEAQQAGWQRAV 683
Query: 696 QTVQKLAIVVELLLGDIPE 640
+Q V L LG++ E
Sbjct: 684 VAIQNWLADVALKLGNLEE 702
>UniRef50_Q6LF99 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 793
Score = 33.5 bits (73), Expect = 7.7
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 648 YHLIAIPLQLLIFGQFDGIQQQLFEELFLKPALDVCVHHCI-LTLLLLFCQGSTEILPTH 824
YH+I L+I+G D I +LF+ + K D+C +H I L + G+ ++
Sbjct: 206 YHIIT---SLIIYGNKDEIYNKLFKYFYDKCFNDICTYHFISLIFQCFYNHGNDDMKNDI 262
Query: 825 CCWHFQEKLTYL 860
W + TYL
Sbjct: 263 YLWLLKNVKTYL 274
>UniRef50_Q9Y820 Cluster: Nuclear pore associated protein Thp1-Sac3
complex subunit; n=1; Schizosaccharomyces pombe|Rep:
Nuclear pore associated protein Thp1-Sac3 complex
subunit - Schizosaccharomyces pombe (Fission yeast)
Length = 442
Score = 33.5 bits (73), Expect = 7.7
Identities = 28/112 (25%), Positives = 50/112 (44%)
Frame = -1
Query: 864 LVSKSVFPENASNNEWARFLYYLGRIKAARLEYSDAHKHLVQALRKAPQTAAVGFRQTVQ 685
++S A+ E F YYLGR + + A HL+ + + P R ++
Sbjct: 208 VISSGADISRATMAELVTFRYYLGRCHLYQRKIHQAKDHLLFSFLQCPDECYHQKRLSLI 267
Query: 684 KLAIVVELLLGDIPERVIFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLEN 529
L + L+LG P + + + L A P L +A++ G+++ F LE+
Sbjct: 268 YLTTCL-LILGKSPTKGLLEKYKLTAAFEP---LIKALKSGDIKSFRLSLED 315
>UniRef50_Q0V091 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 560
Score = 33.5 bits (73), Expect = 7.7
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = -1
Query: 810 FLYYLGRIKAARLEYSDAHKHLVQALRKA-PQTAAVGFRQTVQKLAIVVELLLGDIPERV 634
FLYYLGR A ++ A L +A R+ + V ++LG P
Sbjct: 254 FLYYLGRYHFANTDFYWAQLVLQEAWDNCYAHPDCYKQRRLILIYLTVANIILGRFPTES 313
Query: 633 IFRQAPLRKALAPYFQLTQAVRLGNLQRFGEVLE 532
++ + + LT+A+R G+L+ F + +
Sbjct: 314 VYEMKEAQGFREHFKPLTEAIRKGDLETFMRITD 347
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,406,304
Number of Sequences: 1657284
Number of extensions: 15876394
Number of successful extensions: 40348
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 38981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40314
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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