Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17c10
         (199 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   2.1  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    19   3.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   3.6  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    19   3.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    19   4.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    19   6.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   6.3  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    19   6.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    18   8.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    18   8.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    18   8.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    18   8.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    18   8.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    18   8.4  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 121 HTRXGQKIIERSIKNSGTFW 62
           H    +K+I   IKN  ++W
Sbjct: 78  HKEGVRKVIRHLIKNKPSWW 97


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 59  WPKCAGVFNGSLNDFLP 109
           W +  GV  G   DF P
Sbjct: 732 WKRATGVSPGDYKDFKP 748


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 121 DKRGHDKQQDNQLHGVLYS 177
           +K   DK+ D  +HG + S
Sbjct: 171 EKDEEDKRDDTDMHGRIKS 189


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 125 LSHSLXAENH 96
           L+HSL A NH
Sbjct: 218 LTHSLAASNH 227


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 103 KIIERSIKNSGTFWPS 56
           K +ER+IK S   +PS
Sbjct: 63  KYLERAIKESLRLYPS 78


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 121 HTRXGQKIIERSIKNSGTFW 62
           H    +K++   IKN   +W
Sbjct: 79  HKEGVRKVLHHLIKNKPNWW 98


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 72  PEFLMDLSMIFC 107
           P ++   SM+FC
Sbjct: 64  PNYIRTTSMVFC 75


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 72  PEFLMDLSMIFC 107
           P ++   SM+FC
Sbjct: 64  PNYIRTTSMVFC 75


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 41   AFSPSGWPKCAGV 79
            AF P GW   A V
Sbjct: 1975 AFKPKGWLLSAAV 1987


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 103 KIIERSIKNSGTFWPS 56
           K +ER IK S   +PS
Sbjct: 46  KYLERCIKESLRLYPS 61


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 121 HTRXGQKIIERSIKNSGTFW 62
           H    +K+I   I+N   +W
Sbjct: 79  HKEGVRKVIHHLIENKPNWW 98


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 121 HTRXGQKIIERSIKNSGTFW 62
           H    +K+I   I+N   +W
Sbjct: 79  HKEGVRKVIHHLIENKPNWW 98


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 157 LHGVLYSTIYGSLF 198
           +HG  + T YGS +
Sbjct: 118 IHGGAFMTGYGSFY 131


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 157 LHGVLYSTIYGSLF 198
           +HG  + T YGS +
Sbjct: 118 IHGGAFMTGYGSFY 131


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 157 LHGVLYSTIYGSLF 198
           +HG  + T YGS +
Sbjct: 118 IHGGAFMTGYGSFY 131


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 157 LHGVLYSTIYGSLF 198
           +HG  + T YGS +
Sbjct: 118 IHGGAFMTGYGSFY 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,694
Number of Sequences: 336
Number of extensions: 840
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2263821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)