Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17c10
         (199 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    32   0.13 
AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ...    27   4.8  

>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 5   CLRVCCKVFESCAFSPSGWPKCAGVF 82
           C  +C K    C   P GWP C G++
Sbjct: 415 CCTLCNKPLNKCDNVPCGWPNCRGIY 440


>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
            protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = -1

Query: 169  EHHEADYPAVCRGRV-CHT---RXGQKIIERS 86
            EH E DYPAVC      HT   R G+ I + S
Sbjct: 972  EHFETDYPAVCNANTNLHTYTMRTGKLIYDDS 1003


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,806,570
Number of Sequences: 53049
Number of extensions: 137709
Number of successful extensions: 499
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 24,988,368
effective HSP length: 45
effective length of database: 22,601,163
effective search space used: 452023260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)