Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17c10
(199 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 0.61
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 1.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 4.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 4.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 19 4.3
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 19 5.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 5.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 5.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 5.7
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 19 7.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 19 7.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 19 7.5
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 18 9.9
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 0.61
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 97 IERSIKNSGTFWPSRGAE 44
+++ +KN TFW +RG +
Sbjct: 201 LDQEMKNVLTFWMNRGVD 218
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 1.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 162 MKLIILLFVVAAFVTLAXGRKSLRDPLKTPAH 67
M I+LL A +TLA G + DP P H
Sbjct: 2 MPAIVLLL---ALLTLAAGEIAHNDPHFAPGH 30
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.4 bits (38), Expect = 4.3
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 199 EKATHILXNIEHHEADYPAVCRGRVCH-TRXGQKIIERSIKN 77
+KA + + HHE DY + RG + Q II I N
Sbjct: 756 KKARSVNHLLTHHEYDY-ELSRGYIDEKILENQNIITHMILN 796
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.4 bits (38), Expect = 4.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +1
Query: 103 SAXSECDKRGHDKQQDNQLHG 165
S E + RGH Q + HG
Sbjct: 387 SDSGENNSRGHSGQSSSHHHG 407
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 19.4 bits (38), Expect = 4.3
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +1
Query: 52 LGMAKMCRSF*W 87
+G+A C++F W
Sbjct: 286 MGVASFCKAFPW 297
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 19.0 bits (37), Expect = 5.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2
Query: 149 IISFMVFYIXQYM 187
+I ++ F+I QYM
Sbjct: 121 VIDYVKFHITQYM 133
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.0 bits (37), Expect = 5.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 199 EKATHILXNIEHH 161
EKA H + I+HH
Sbjct: 452 EKALHNVMFIQHH 464
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.0 bits (37), Expect = 5.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 68 CAGVFNGSLNDFLPXASVT 124
C GVF ++ F+P +T
Sbjct: 503 CVGVFTFNIIKFVPVKYLT 521
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.0 bits (37), Expect = 5.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 68 CAGVFNGSLNDFLPXASVT 124
C GVF ++ F+P +T
Sbjct: 556 CVGVFTFNIIKFVPVKYLT 574
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 18.6 bits (36), Expect = 7.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 69 VPEFLMDLSMIFCP 110
+P FLM + + FCP
Sbjct: 341 LPFFLMYVIVPFCP 354
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 18.6 bits (36), Expect = 7.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 69 VPEFLMDLSMIFCP 110
+P FLM + + FCP
Sbjct: 341 LPFFLMYVIVPFCP 354
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 18.6 bits (36), Expect = 7.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 69 VPEFLMDLSMIFCP 110
+P FLM + + FCP
Sbjct: 341 LPFFLMYVIVPFCP 354
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +1
Query: 4 LSSCLL*GLRIXCFQP 51
L CL G+R C P
Sbjct: 41 LKKCLTVGMRPECMVP 56
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,311
Number of Sequences: 438
Number of extensions: 830
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2668491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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