Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17c07
(867 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 272 3e-73
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 48 1e-05
02_01_0353 + 2545982-2549833 48 1e-05
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460... 46 3e-05
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262... 41 0.001
04_04_0517 + 25841292-25842099,25842256-25842308 34 0.17
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 33 0.22
11_06_0182 + 20997071-20997832,20998010-20998150 33 0.30
08_01_1068 + 10899965-10900129,10900408-10900562,10900688-109009... 31 1.6
07_01_0802 - 6287180-6287605 31 1.6
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101... 30 2.1
11_03_0041 + 9165575-9165800,9166286-9166362 30 2.8
10_02_0162 + 6054823-6055830 30 2.8
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 30 2.8
10_08_0241 - 16111792-16112367 29 3.6
08_01_1070 + 10932102-10932291,10936686-10936947,10937158-109372... 29 3.6
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 3.6
02_04_0196 + 20835495-20837255 29 3.6
09_04_0045 + 14094536-14094870,14094958-14095147 29 4.8
08_02_0720 + 20394898-20395284,20396062-20396202,20396304-203966... 29 4.8
07_03_1107 - 24024387-24024497,24025799-24026410 29 4.8
01_06_0065 + 26107522-26107700,26110875-26111253 29 4.8
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79... 29 6.4
07_01_0806 - 6308383-6308856 29 6.4
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 29 6.4
04_04_0344 - 24536516-24537323,24537449-24537567,24539044-245394... 29 6.4
03_05_0576 + 25765137-25766420 29 6.4
03_04_0159 + 17832666-17832938,17833634-17833873 29 6.4
02_03_0148 - 15741241-15741376,15742155-15742237,15742313-157423... 29 6.4
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728 29 6.4
12_01_0725 + 6428572-6428817 28 8.4
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 28 8.4
04_04_0976 + 29839697-29840350 28 8.4
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 28 8.4
02_05_1217 + 34999631-34999945,35000670-35000835,35001908-350020... 28 8.4
>09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 272 bits (666), Expect = 3e-73
Identities = 131/231 (56%), Positives = 174/231 (75%)
Frame = -2
Query: 851 AP*WADRTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELA 672
AP TIE LLP+FL+ LKDE P+VRLNIIS L+ VN+VIGI L QSLLPAIVELA
Sbjct: 347 APVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELA 406
Query: 671 EDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQ 492
ED WRVRLAIIE++PLLA QLG FFD+KL +LCM WL D V++IR+AA NLK+L E+
Sbjct: 407 EDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEE 466
Query: 491 YGPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDN 312
+GP+WA ++IP+VL + +YL+RMT L I++L+ V G +IT + LLP V++ + D
Sbjct: 467 FGPEWAMQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLPVVINSSKDR 526
Query: 311 VANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYFASEAI 159
V N++FNVAK LQ + LD +V++ VKP L +L+ DPDVDV+Y+A++A+
Sbjct: 527 VPNIKFNVAKVLQALIPILDQSVVEKNVKPCLVELSEDPDVDVRYYANQAL 577
Score = 80.6 bits (190), Expect = 1e-15
Identities = 52/206 (25%), Positives = 93/206 (45%)
Frame = -2
Query: 815 LLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAII 636
++ +F +D+ VRL + + +++ Q V +LP IV ++D WRVR +
Sbjct: 203 VMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVA 262
Query: 635 EHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIP 456
+ L +G E E+L + L D+ +R AA + K PQ A +++P
Sbjct: 263 NQLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILP 322
Query: 455 KVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTL 276
V +S + + R I ++ V GK+ T LLP LS+ D +VR N+ L
Sbjct: 323 CVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKL 382
Query: 275 QIMAKYLDPAVIQPQVKPVLEKLNVD 198
+ + + ++ + P + +L D
Sbjct: 383 DQVNQVIGIDLLSQSLLPAIVELAED 408
Score = 70.1 bits (164), Expect = 2e-12
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Frame = -2
Query: 821 EHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLA 642
E L+P ++ L+D EVR+ + ++ Q +Q +LP + EL+ D+ VR A
Sbjct: 279 EQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSA 338
Query: 641 IIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNV 462
+ + +A LG+E E+L + +S L D +R L ++ + G ++
Sbjct: 339 LASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSL 398
Query: 461 IPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAK 282
+P ++ ++ ++++ R+ + I +L+ G L + +D V ++R A
Sbjct: 399 LPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAAN 458
Query: 281 TLQIMAKYLDPA-VIQPQVKPVLEKLN 204
L+ +A+ P +Q + VLEK+N
Sbjct: 459 NLKRLAEEFGPEWAMQHIIPQVLEKIN 485
Score = 52.8 bits (121), Expect = 3e-07
Identities = 41/189 (21%), Positives = 79/189 (41%)
Frame = -2
Query: 713 QLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAI 534
QL L +L +D VR A ++ A + Q + ++ S+ D ++
Sbjct: 159 QLKAELRTIYGQLCQDDMPMVRRAAASNLGKFAATVEQNYLKTEVMSIFDDLTQDDQDSV 218
Query: 533 REAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITT 354
R A L + PQ +++P ++N S ++++ R + L E G + +
Sbjct: 219 RLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSR 278
Query: 353 RVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYF 174
L+P + + DN A VR A + + L P + + P +++L+ D V+
Sbjct: 279 EQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSA 338
Query: 173 ASEAIAGIA 147
+ I G+A
Sbjct: 339 LASVIMGMA 347
Score = 52.0 bits (119), Expect = 6e-07
Identities = 42/225 (18%), Positives = 95/225 (42%)
Frame = -2
Query: 824 IEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRL 645
I+H+LP D VR + S + + V+G + ++ LLP + L +D VRL
Sbjct: 317 IQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRL 376
Query: 644 AIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENN 465
II + + +G + + L + D + +R A + L Q G + ++
Sbjct: 377 NIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDK 436
Query: 464 VIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVA 285
+ + ++ + R + L+E G + + ++P VL ++ R +
Sbjct: 437 LGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQVLEKINNPHYLYRMTIL 496
Query: 284 KTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYFASEAIAGI 150
+ + ++A + + Q+ PV+ + D ++K+ ++ + +
Sbjct: 497 QAISLLAPVMGAEITCQQLLPVVINSSKDRVPNIKFNVAKVLQAL 541
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/203 (20%), Positives = 81/203 (39%)
Frame = -2
Query: 788 KDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQ 609
+D+ P VR SNL + L ++ +L +D + VRL +E L
Sbjct: 173 QDDMPMVRRAAASNLGKFAATVEQNYLKTEVMSIFDDLTQDDQDSVRLLAVEGCAALGKL 232
Query: 608 LGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQ 429
L + + + +++ D + +R L +L E GP+ + ++P + + +
Sbjct: 233 LEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAYVRLLRDN 292
Query: 428 NYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDP 249
R+ + + + + +LP V ++ D+ +VR +A + MA L
Sbjct: 293 EAEVRIAAAGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGK 352
Query: 248 AVIQPQVKPVLEKLNVDPDVDVK 180
Q+ P+ L D DV+
Sbjct: 353 EATIEQLLPIFLSLLKDEFPDVR 375
Score = 35.5 bits (78), Expect = 0.055
Identities = 41/221 (18%), Positives = 89/221 (40%)
Frame = -2
Query: 812 LPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIE 633
+ + + +LK+E ++RLN I L + +G ++ + L+P + E +D V LA+ E
Sbjct: 11 IAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDED-EVLLAMAE 69
Query: 632 HMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPK 453
+ + +G L + +R+ A +L ++ Q + +P
Sbjct: 70 ELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKESDIVDWFVPV 129
Query: 452 VLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQ 273
V ++ + + R++ ++ + D L + D++ VR A L
Sbjct: 130 VKRLAAGEWFTARVSSCGLFHI-AYPSAPDQLKAELRTIYGQLCQDDMPMVRRAAASNLG 188
Query: 272 IMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYFASEAIAGI 150
A ++ ++ +V + + L D V+ A E A +
Sbjct: 189 KFAATVEQNYLKTEVMSIFDDLTQDDQDSVRLLAVEGCAAL 229
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 48.0 bits (109), Expect = 1e-05
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Frame = -2
Query: 818 HLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVR 648
HL + L +E PEV +I+ L+ + VIG+ ++ ++ LLP + + ++ +V+
Sbjct: 827 HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 886
Query: 647 LAIIEHMPLLAGQLGQEFFD-EKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQ 480
I+ + +A + G EF + +C + L H IR A + + GPQ
Sbjct: 887 ENCIDLVGRIADR-GAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQ 945
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
+V+ +LN Q +R+ I +++E C + +LP +++ NV
Sbjct: 946 ----DVLATLLNNLKVQERQNRVCTTVAIAIVAETC----SPFTVLPALMNEYRVPELNV 997
Query: 299 RFNVAKTLQIMAKYLDPAVIQ--PQVKPVLEKLNVDPDVDVKYFASEAIAGIA 147
+ V K+L + +Y+ V P+LE +D D+ + A+ A+ +A
Sbjct: 998 QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMA 1050
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 48.0 bits (109), Expect = 1e-05
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Frame = -2
Query: 818 HLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVR 648
HL + L +E PEV +I+ L+ + VIG+ ++ ++ LLP + + ++ +V+
Sbjct: 952 HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1011
Query: 647 LAIIEHMPLLAGQLGQEFFD-EKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQ 480
I+ + +A + G EF + +C + L H IR A + + GPQ
Sbjct: 1012 ENCIDLVGRIADR-GAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQ 1070
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
+V+ +LN Q +R+ I +++E C + +LP +++ NV
Sbjct: 1071 ----DVLATLLNNLKVQERQNRVCTTVAIAIVAETC----SPFTVLPALMNEYRVPELNV 1122
Query: 299 RFNVAKTLQIMAKYLDPAVIQ--PQVKPVLEKLNVDPDVDVKYFASEAIAGIA 147
+ V K+L + +Y+ V P+LE +D D+ + A+ A+ +A
Sbjct: 1123 QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMA 1175
>02_03_0220 + 16545571-16545573,16545717-16545818,16545980-16546008,
16549421-16553036
Length = 1249
Score = 46.4 bits (105), Expect = 3e-05
Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Frame = -2
Query: 818 HLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVR 648
HL + L +E P+V +I+ L+ + V+G+ ++ ++ LLP + + ++ +V+
Sbjct: 997 HLGHILYESLGEEYPDVLGSILGALKAIVNVVGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1056
Query: 647 LAIIEHMPLLAGQLGQEFFD-EKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQ 480
I+ + +A + G EF + +C + L H IR A + + GP+
Sbjct: 1057 ENCIDLVGRVADR-GAEFVPAREWMRICFELLEMLKAHKKGIRRATANTFGYIAKAIGPE 1115
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
+V+ +LN Q +R+ I +++E C + +LP +++ NV
Sbjct: 1116 ----DVLATLLNNLKVQERQNRVCTTVAIAIVAETC----SPFTVLPALMNEYRVPEFNV 1167
Query: 299 RFNVAKTLQIMAKYLDPAVIQ--PQVKPVLEKLNVDPDVDVKYFASEAIAGIA 147
R + K+L + +Y+ V P+LE +D D+ + A+ A+ +A
Sbjct: 1168 RNGILKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMA 1220
>01_05_0705 +
24424457-24424948,24425520-24425624,24426097-24426207,
24426675-24426857,24427066-24427192,24427336-24427397,
24427638-24427724,24428703-24428789,24429210-24429323,
24429507-24429635,24429834-24429896,24430333-24430494,
24430611-24430729,24430786-24431794
Length = 949
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Frame = -2
Query: 824 IEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELA-EDTKWRVR 648
I H+LP+ + D P ++ ++ ++ + ++ L QS+LP + LA + T VR
Sbjct: 463 ISHVLPMLVRAYDDTDPRLQEEVLRRTVPLSRQLDVKLLKQSVLPRVHGLALKTTVAAVR 522
Query: 647 LAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLV-EQYGPQWAE 471
+ + + L L +E E L +L VDH A TL + + +Q G ++A
Sbjct: 523 VNALRCLGDLVPSLDKEGILEILQTLRRCTAVDHT-APTLMCTLGVANAIFKQCGVEFAA 581
Query: 470 NNVIPKV--LNMSHEQNYLHRMTYLFCI 393
VIP V L +H+ N Y+ +
Sbjct: 582 EYVIPLVFPLLTAHQLNVQQFAKYILFV 609
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 616 RDSWARSSSTRS*PACACRGWWTTC-TPSARLR 521
R W+ +ST P C RGW TC +P+AR R
Sbjct: 183 RPRWSPGASTGRRPTCGARGWSCTCSSPAARSR 215
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 33.5 bits (73), Expect = 0.22
Identities = 37/186 (19%), Positives = 81/186 (43%), Gaps = 15/186 (8%)
Frame = -2
Query: 716 QQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQE---FFDEKLTSLCMSWLVDH 546
++++ S++P + + +D R + + + G G+ F + L + L D
Sbjct: 1878 ERVLPSIIPILSQGLKDPDASRRQGVCIGLSEVMGSAGKHQLLSFMDLLIPTIRTALCDS 1937
Query: 545 VYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNY-------LHRMTYLF---C 396
+RE+A L L + G Q A + ++P +L + L ++ F
Sbjct: 1938 TQEVRESAGLAFSTLYKSAGLQ-AIDEIVPTLLRALEDDETSATALDGLKQILSSFNAHA 1996
Query: 395 INVLSEVCGKDITTRV--LLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKP 222
+ L+EV G + + + +LP ++ DD A+V+ + K + + +D I+ +
Sbjct: 1997 LGALAEVAGPGLNSHIGTVLPALILAMDDEDADVQNSARKAAETVVLVIDEEGIETLIPE 2056
Query: 221 VLEKLN 204
+L+ +N
Sbjct: 2057 LLKGVN 2062
Score = 29.1 bits (62), Expect = 4.8
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = -2
Query: 836 DRTTIEHLLPLFLTQLKDECPEVR---LNIISNLEC-VNEVIGIQQLVQSLLPAIVELAE 669
D ++ L+P+ L++ + + I+ N+ V E + + LLP + ++
Sbjct: 1530 DAPSLALLVPIVHRGLRERGVDTKKKAAQIVGNMSSLVTEPKDMIPYIGLLLPEVKKVLV 1589
Query: 668 DTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQY 489
D VR + L +G+E F + + L + D R A L +++
Sbjct: 1590 DPIPEVRAVAARALGSLIIGMGEEIFPDLVPWLLDTLKSDSSNVERSGAAQGLSEVLAAL 1649
Query: 488 GPQWAENNVIPKVL-NMSHEQNYLHRMTYLFCINVLSEVCGKDITT--RVLLPTVL-SMA 321
G + + ++P ++ N SH++ + R +L L G +++LP +L +A
Sbjct: 1650 GKDYFD-QILPDIIRNCSHQKASV-RDGHLTLFRYLPRSLGGVFQNYLQIVLPAILDGLA 1707
Query: 320 DDN 312
D+N
Sbjct: 1708 DEN 1710
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -2
Query: 839 ADRTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEV--IGIQQLVQSLLPAIVELAED 666
++ +T++ L+ L L+D+ EVR +S L+ ++ + + L PAI E +D
Sbjct: 2471 SEASTLQ-LIQLLALALRDDSSEVRRRSLSRLKAAAKINNPALATHLSILGPAIAEALKD 2529
Query: 665 TKWRVRLA 642
T VR+A
Sbjct: 2530 TNTPVRVA 2537
>11_06_0182 + 20997071-20997832,20998010-20998150
Length = 300
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 373 HTSDSTLMQNKYVILCK*FCSCDMFSTLGMTLFSAHCGPYCSTSFFR 513
HT + T+ + ++ K F SCD G T+ H PYC SF R
Sbjct: 94 HTGEVTVSDSSSILYYKAFVSCDPSMGGGYTVVLIH-NPYCQLSFAR 139
>08_01_1068 +
10899965-10900129,10900408-10900562,10900688-10900996,
10901870-10901939,10902504-10902802,10904305-10904724,
10906063-10906324
Length = 559
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 661 SGGSVWPSSSTCLYWRDSWARSSSTRS*PACACRGWWT 548
S G +W SS C +W+ +W + T S PA R WT
Sbjct: 114 SAGVIW--SSAC-FWKVAWRKLQLTTSPPATPSRWHWT 148
>07_01_0802 - 6287180-6287605
Length = 141
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 355 PGCCCRPCCLWPTTMLPTCGSMLPRRC 275
PG CRP +PT LP C +++ R+C
Sbjct: 13 PGEQCRPGISYPTYSLPQCRTLVRRQC 39
>02_04_0622 -
24508508-24508666,24509533-24509634,24510108-24510176,
24510294-24510362,24510428-24510502,24510584-24510688,
24511309-24511407,24511521-24513230,24513489-24513788,
24514748-24514846,24514962-24515079,24515166-24515251,
24515334-24515402,24515746-24515843,24516373-24516534,
24516779-24516787,24516970-24516991,24517620-24517712,
24517872-24517940,24518720-24518782,24518882-24519037,
24520895-24521230
Length = 1355
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 824 IEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIV-ELAEDTKWRVR 648
+E +LP ++L D VR S LE V+G + +LLPA+V L E + +
Sbjct: 795 VERILPYVFSRLIDPKELVRQPCSSTLE----VVGRTYPIDTLLPALVRSLDEQRSPKAK 850
Query: 647 LAIIE 633
LA++E
Sbjct: 851 LAVLE 855
>11_03_0041 + 9165575-9165800,9166286-9166362
Length = 100
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 723 RHPTAGAVSPPRHRGAGRGHQVEGPSGHHRAHASTGG 613
RH A H G G G +G SGHH A +GG
Sbjct: 38 RHRAASVARARAHCGGGDGK--DGGSGHHGARGGSGG 72
>10_02_0162 + 6054823-6055830
Length = 335
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 687 GGEERLHQLLDADHFIHTLEVGDYVESDFGTFILQLCEEQRQEMFNSGSVC 839
G EE + + + IH E G + +D F+ +LCE QE+ VC
Sbjct: 47 GNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVC 97
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -1
Query: 720 HPTAGAVSPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPGVLRREADQLVHVVAGGPR 544
H A A P ++ G G H G HH H GG G + EA+ + + P+
Sbjct: 252 HQAAAAAGPSQYHGHGHPHH--GGGHHHSKH---GGAGGGEISAAEAESIKAKIMAHPQ 305
>10_08_0241 - 16111792-16112367
Length = 191
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 681 GAGRGHQV-EGPSGHHRAHASTGGTAGPG 598
GAG+G V G S ++ AHAS GG G G
Sbjct: 49 GAGKGSGVGSGSSNYYGAHASGGGGGGGG 77
>08_01_1070 +
10932102-10932291,10936686-10936947,10937158-10937292,
10937468-10938791
Length = 636
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 354 GRDVLAAHFGQHVNAEQVRHPVQVVLLVRHVQYFGYDVVLCPLRPVLL--HQLLQVEGRS 527
G+ H G H + + +V+ + V + G +++ PLR +++ H+L G +
Sbjct: 75 GKSANEGHIGSHGRNVEEPNIGRVIAFLFLVNFSGLFIIV-PLRKMMIIRHRLTFPSGTA 133
Query: 528 LADGVHVVHQPRHAQAGQLLVEELLAQL 611
A ++ H P A+ +L V L L
Sbjct: 134 TAHLINSFHTPHGAKQARLQVVTLFKSL 161
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -2
Query: 788 KDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIE 633
KD C EVR++ I+ L + + ++++ LLP + ++ D VR + ++
Sbjct: 419 KDSCTEVRVSTINGLIYLLDNPQSHEILKVLLPRLSDMVSDPALSVRSSAVD 470
>02_04_0196 + 20835495-20837255
Length = 586
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 587 RRRTPGPAVPPVEACAR*WPDGPSTWCPLPAPRWRGGETAPAVGCRSLHSHTR 745
RR P PP + A + PS CPL A R G APA +L++ R
Sbjct: 7 RRLLPWLRTPPSSSSAAAFSSAPSRGCPLHAALARRG--APAAASLALYARIR 57
>09_04_0045 + 14094536-14094870,14094958-14095147
Length = 174
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 601 WPSCPASRGMCSMMARRTLHLVSSASSTMA 690
WP CPAS G+ M RR + + SA + +A
Sbjct: 31 WPCCPAS-GLFDQMPRRRWNTLCSADAALA 59
>08_02_0720 +
20394898-20395284,20396062-20396202,20396304-20396669,
20397146-20397388,20397474-20397566,20397892-20398077,
20398259-20398471
Length = 542
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 598 SWPSCPASRGMCSMMARRTLHLVSSASSTMAGRRDCTSCWMPITSFTHS 744
+WP+ + ++ R H+ ASS +A R C + + + THS
Sbjct: 55 TWPAVGSVHSAVDLLPRFVAHVAPEASSAVAWRATCFADNEAVLTLTHS 103
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +2
Query: 542 TRGPPATTCTSWSASRRRTPGPAVPPVEACAR*WPDGPSTWCPLPAPRWRGGETAPA 712
T P A+T + + + TP PA P P ST P PAP+ PA
Sbjct: 53 TTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKATPPPA 109
>01_06_0065 + 26107522-26107700,26110875-26111253
Length = 185
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 577 PACACRGWWTTCTPSARLRP 518
P C C W CTP ARLRP
Sbjct: 19 PPCPCPAWRLCCTP-ARLRP 37
>08_01_0107 -
789217-789984,790070-790219,790303-790890,790968-791093
Length = 543
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 705 AVSPPRHRGAGRGHQVEGPSGH-HRAHASTGGTA 607
+ SP RG G G PS H HR HAS+GG A
Sbjct: 400 SASPRVERGGGGGGSYT-PSLHSHRHHASSGGAA 432
>07_01_0806 - 6308383-6308856
Length = 157
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 355 PGCCCRPCCLWPTTMLPTCGSMLPRRC 275
PG C+P +PT LP C + + R+C
Sbjct: 37 PGQLCQPGIGYPTYPLPRCRAFVKRQC 63
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 810 AAVPHTTEG*MSRSPTQHNLQPRVCE*SDRHPTAGAVSPPRHR 682
A+ P + S SP+ H L R + R P A SPPRHR
Sbjct: 16 ASTPACSSASSSTSPSPHCLLSRA---NPRPPRLAAPSPPRHR 55
>04_04_0344 -
24536516-24537323,24537449-24537567,24539044-24539484,
24540291-24540508,24540641-24540728
Length = 557
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 662 WCPLPAPRWRGGETAPAVGCRSLHSHTRGW 751
WC L W G V + H H RGW
Sbjct: 474 WCELGLASWMGTFLVELVNKATRHGHHRGW 503
>03_05_0576 + 25765137-25766420
Length = 427
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 551 PPATTCTSWSASRRRTPGPAVPPVEACAR*WPDG 652
PP S S + P P +PPVEA R P G
Sbjct: 93 PPPAAAVSVSPPTQPRPRPELPPVEAVLRRQPKG 126
>03_04_0159 + 17832666-17832938,17833634-17833873
Length = 170
Score = 28.7 bits (61), Expect = 6.4
Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -1
Query: 723 RHPTAGAVSPPRHRGAGRGHQVEGPSGHHRAHASTG-GTAGPGVLRREADQLVHVVAGGP 547
+HP G P RG GRG G G A + G G GP RR AGG
Sbjct: 8 KHPKRGRGRPRGRRGRGRG---RGRGGRSLASPAAGPGDQGPR-RRRGVVPAAAAAAGGR 63
Query: 546 RVRHPR 529
+R R
Sbjct: 64 ALRERR 69
>02_03_0148 -
15741241-15741376,15742155-15742237,15742313-15742394,
15742514-15742578,15742667-15742792,15743138-15743188
Length = 180
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 795 CEEQRQEMFNSGSVCPLWGSGP 860
C+ QRQE + C +WG P
Sbjct: 36 CDRQRQEFRRTNGKCSIWGKAP 57
>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
Length = 316
Score = 28.7 bits (61), Expect = 6.4
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = -1
Query: 774 RSPTQHNLQPRVCE*SDRHPTAGAVSPPRHRGAGRGH---QVEG---PSGHHRAHASTGG 613
RS + + + E DR AG PP A R + ++G P G++R +S G
Sbjct: 70 RSVEKRVVSVPIAECGDRPKGAGEGPPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGC 129
Query: 612 TAGPGVLRREADQLVHVVAGGPRVRHPRGCDPQP 511
A V R AD V +V HP PQP
Sbjct: 130 PARKQVERSRADPTVLLVTYSFEHNHPW---PQP 160
>12_01_0725 + 6428572-6428817
Length = 81
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 599 PGPAVPPVEACAR*WPDGPSTWCPLPAP 682
P P V P C+ + ++WCP P P
Sbjct: 50 PSPVVEPSGCCSGHRSEAVASWCPNPTP 77
>06_03_0650 +
23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 702 VSPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPGVLRR 586
++PPRH+ A + G GH H GG GP ++
Sbjct: 1 MAPPRHQPAAG--KAGGGRGHGHGHGHGGGGGGPAARKQ 37
>04_04_0976 + 29839697-29840350
Length = 217
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +3
Query: 540 VHVVHQPRHAQAGQLLVEELLAQLSRQ*RHVLDDGQTDPPLGVLCQLHDGGEERLHQLLD 719
V VV +PR A LV+ LLA ++ + + LGVL Q HD GEER+ L
Sbjct: 10 VRVVVRPRCAVLAVHLVD-LLAVVAGVGAPPAEQHEVVEDLGVLVQAHD-GEERVEVL-- 65
Query: 720 ADHFIHTL 743
DH + L
Sbjct: 66 -DHLVDHL 72
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 332 LSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDV 189
LS D + F A Q+ DP ++Q +PV ++VD DV
Sbjct: 287 LSATDAALLGNFFGAAAVSQVGVPTFDPKMLQVFTEPVYSNMHVDDDV 334
>02_05_1217 +
34999631-34999945,35000670-35000835,35001908-35002005,
35002245-35002319,35002413-35002481,35002552-35002637,
35002710-35002827,35003575-35003902,35003995-35005682,
35005822-35005881,35005953-35006027,35006105-35006197,
35006298-35006372,35006464-35006532,35006614-35006682,
35006994-35007113
Length = 1167
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 824 IEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKW-RVR 648
++ LP +QL D ++ + L+ E+ I SLLPA++ E+ K + +
Sbjct: 665 LDKTLPHVFSQLNDPKESIKQQCSAILKLAGEIYSID----SLLPALLRTLEEQKSPKSK 720
Query: 647 LAIIE 633
LAIIE
Sbjct: 721 LAIIE 725
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,248,825
Number of Sequences: 37544
Number of extensions: 562026
Number of successful extensions: 2368
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2354
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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