Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17c07
(867 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 29 0.24
EF519467-1|ABP73543.1| 165|Anopheles gambiae CTLMA2 protein. 26 1.7
AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 25 2.3
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 3.9
AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A... 25 3.9
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 6.9
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 6.9
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 6.9
AY193730-1|AAO62003.1| 441|Anopheles gambiae cytochrome P450 CY... 24 6.9
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 9.1
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 28.7 bits (61), Expect = 0.24
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -1
Query: 765 TQHNLQPRVCE*SDRHPTAGAVSPPRHRGAGRGHQVEGPSGH---HRAHASTGGTAGP-G 598
TQH+ P V + HPT G+ P + G G PS H + GG P G
Sbjct: 369 TQHSHSP-VNGYGNNHPTGGSNLPGNNNGGAGGGGSNTPSNHGALGNTQNNAGGNQTPFG 427
Query: 597 VLRREADQL 571
++ E++ L
Sbjct: 428 QIKSESNPL 436
>EF519467-1|ABP73543.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 25.8 bits (54), Expect = 1.7
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 361 MSLPHTSDSTLMQNKYVILCK*FCSCDMFSTLGMTLFSAHCGPYC 495
+S PHT D L QN + CK F + F + T YC
Sbjct: 10 LSGPHTVDDILQQNPCLCPCKPFEEKEYFIPISRTSDWLGAVAYC 54
>AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative
odorant-binding protein OBPjj4 protein.
Length = 204
Score = 25.4 bits (53), Expect = 2.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 348 HPGRDVLAAHFGQHVNAEQ 404
HPG+DVL H G + ++
Sbjct: 23 HPGKDVLGCHNGTSITVDE 41
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.6 bits (51), Expect = 3.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 121 EILHKGPNIRTVLWSIIDSW 62
++L +G IRT+LW+ I S+
Sbjct: 1287 KLLARGEGIRTLLWTFIKSF 1306
>AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A
protein.
Length = 433
Score = 24.6 bits (51), Expect = 3.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 536 IREAATLNLKKLVEQYGPQWAENNVIPKV 450
+ E A +K L ++YG Q+ NVI +
Sbjct: 335 LNEIAEATVKSLAKRYGTQYKYGNVIDAI 363
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/55 (21%), Positives = 18/55 (32%)
Frame = -1
Query: 762 QHNLQPRVCE*SDRHPTAGAVSPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPG 598
Q Q + +HP++ +H + HH H GG G G
Sbjct: 245 QQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGG 299
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/55 (21%), Positives = 18/55 (32%)
Frame = -1
Query: 762 QHNLQPRVCE*SDRHPTAGAVSPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPG 598
Q Q + +HP++ +H + HH H GG G G
Sbjct: 245 QQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGG 299
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/55 (21%), Positives = 18/55 (32%)
Frame = -1
Query: 762 QHNLQPRVCE*SDRHPTAGAVSPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPG 598
Q Q + +HP++ +H + HH H GG G G
Sbjct: 197 QQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGG 251
>AY193730-1|AAO62003.1| 441|Anopheles gambiae cytochrome P450
CYPm3r10 protein.
Length = 441
Score = 23.8 bits (49), Expect = 6.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 796 VRNSGRRCSIVVLSAHYGAQAHD 864
V++ GRRC VL+ H G +D
Sbjct: 266 VQDKGRRCVKEVLAKHNGELTYD 288
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 9.1
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 571 KLVSFSSKNSWPSCPASRGMCSMMARRTLHLVSSASSTM 687
KL+ N W S P + G + R L+SS S +
Sbjct: 50 KLIQSMRTNRWSSHPEAPGKAIYLTRMDRSLLSSMVSNL 88
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 898,863
Number of Sequences: 2352
Number of extensions: 19052
Number of successful extensions: 72
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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