Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17c07
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 270 1e-72
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 46 4e-05
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 31 1.1
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 3.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.3
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 29 4.3
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 29 5.7
AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 29 5.7
AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 29 5.7
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 28 7.5
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 28 7.5
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 28 7.5
AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.5
AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical ... 28 7.5
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 28 7.5
U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical pr... 28 9.9
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 270 bits (661), Expect = 1e-72
Identities = 126/230 (54%), Positives = 168/230 (73%)
Frame = -2
Query: 851 AP*WADRTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELA 672
AP T+ LLP+++ L D+ PEVRLNIIS+L+ VNEVIG QL SLLPAIV LA
Sbjct: 355 APLIGKEQTVSELLPIYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLA 414
Query: 671 EDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQ 492
ED KWRVRLAI++ MPLLA QLGQEFFDEKL LC++WL DHV++IREA+TL +K+L ++
Sbjct: 415 EDGKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHVFSIREASTLIMKELTQK 474
Query: 491 YGPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDN 312
+G QWA N++PK+ + + NYL RMT LFC+N LSE ++ + ++P V + +D+
Sbjct: 475 FGGQWASTNIVPKMQKLQKDTNYLQRMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVEDD 534
Query: 311 VANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYFASEA 162
V NVRFN AK+L+ + K L P+ + +VKP+LEKL D D DV+YF+ EA
Sbjct: 535 VPNVRFNAAKSLKRIGKNLTPSTLTSEVKPLLEKLGKDSDFDVRYFSEEA 584
Score = 64.9 bits (151), Expect = 7e-11
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 5/218 (2%)
Frame = -2
Query: 836 DRTTIEHLLPLFLTQLK-DECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTK 660
++T + L LT L DE VRL + + ++ + + P ++EL +D
Sbjct: 199 EKTAVIEGLHSSLTDLHVDEQDSVRLLTVESAIAFGTLLDKANKKKLIEPILIELFDDKS 258
Query: 659 WRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQ 480
WRVR + E + + LG++ L ++ + L D +R AAT L++
Sbjct: 259 WRVRYMVAEKLIEIQNVLGEDMDTTHLVNMYTNLLKDPEGEVRCAATQRLQEFALNLPED 318
Query: 479 WAENNVIPKVLNMSHE----QNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDN 312
+N + +LN++ E N L + I L+ + GK+ T LLP + + +D
Sbjct: 319 KRQNIICNSLLNVAKELVTDGNQLVKSELAGVIMGLAPLIGKEQTVSELLPIYMQLLNDQ 378
Query: 311 VANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVD 198
VR N+ +L + + + A + + P + L D
Sbjct: 379 TPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAED 416
Score = 49.6 bits (113), Expect = 3e-06
Identities = 39/193 (20%), Positives = 81/193 (41%)
Frame = -2
Query: 728 VIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVD 549
+IG +Q V LLP ++L D VRL II + + +G L + D
Sbjct: 357 LIGKEQTVSELLPIYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAED 416
Query: 548 HVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCG 369
+ +R A + L Q G ++ + ++P LN + + R + L++ G
Sbjct: 417 GKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHVFSIREASTLIMKELTQKFG 476
Query: 368 KDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDV 189
+ ++P + + D R L +++ + I ++ P+++ L D
Sbjct: 477 GQWASTNIVPKMQKLQKDTNYLQRMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVEDDVP 536
Query: 188 DVKYFASEAIAGI 150
+V++ A++++ I
Sbjct: 537 NVRFNAAKSLKRI 549
Score = 48.0 bits (109), Expect = 9e-06
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 4/211 (1%)
Frame = -2
Query: 818 HLLPLFLTQLKDECPEVRLNIISNLE--CVNEVIGIQQ--LVQSLLPAIVELAEDTKWRV 651
HL+ ++ LKD EVR L+ +N +Q + SLL EL D V
Sbjct: 284 HLVNMYTNLLKDPEGEVRCAATQRLQEFALNLPEDKRQNIICNSLLNVAKELVTDGNQLV 343
Query: 650 RLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAE 471
+ + + LA +G+E +L + M L D +R +L K+ E G
Sbjct: 344 KSELAGVIMGLAPLIGKEQTVSELLPIYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLS 403
Query: 470 NNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFN 291
+++P ++ ++ + + R+ + + +L+ G++ LLP L+ D+V ++R
Sbjct: 404 TSLLPAIVGLAEDGKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHVFSIREA 463
Query: 290 VAKTLQIMAKYLDPAVIQPQVKPVLEKLNVD 198
++ + + + P ++KL D
Sbjct: 464 STLIMKELTQKFGGQWASTNIVPKMQKLQKD 494
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical protein
T08A11.2 protein.
Length = 1322
Score = 46.0 bits (104), Expect = 4e-05
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Frame = -2
Query: 818 HLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVR 648
H+ + L +E PEV +I+ L+ + VIG+ ++ ++ LLP + + ++ +V+
Sbjct: 991 HMGVVLYEYLGEEYPEVLGSILGALKAICNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1050
Query: 647 LAIIEHMPLLAGQLGQEFFD-EKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQ 480
I+ + +A + G EF + +C + L H +IR AA + + GP
Sbjct: 1051 ENCIDLVGAIADR-GSEFVSAREWMRICFELLELLKAHKKSIRRAAINTFGFIAKAIGP- 1108
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
++V+ +LN Q R+ I ++SE C +LP +++ NV
Sbjct: 1109 ---HDVLATLLNNLKVQERQLRVCTTVAIAIVSETC----APFTVLPAIMNEYRVPEINV 1161
Query: 299 RFNVAKTLQIMAKYLDPAVIQ--PQVKPVLEKLNVDPDVDVKYFASEAIAGIA 147
+ V K L M +Y+ V P+L ++ D + A +A+A +A
Sbjct: 1162 QNGVLKALSFMFEYIGEMAKDYIYAVVPLLIDALMERDQVHRQIAVDAVAHLA 1214
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 46.0 bits (104), Expect = 4e-05
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Frame = -2
Query: 818 HLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVR 648
H+ + L +E PEV +I+ L+ + VIG+ ++ ++ LLP + + ++ +V+
Sbjct: 991 HMGVVLYEYLGEEYPEVLGSILGALKAICNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1050
Query: 647 LAIIEHMPLLAGQLGQEFFD-EKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQ 480
I+ + +A + G EF + +C + L H +IR AA + + GP
Sbjct: 1051 ENCIDLVGAIADR-GSEFVSAREWMRICFELLELLKAHKKSIRRAAINTFGFIAKAIGP- 1108
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
++V+ +LN Q R+ I ++SE C +LP +++ NV
Sbjct: 1109 ---HDVLATLLNNLKVQERQLRVCTTVAIAIVSETC----APFTVLPAIMNEYRVPEINV 1161
Query: 299 RFNVAKTLQIMAKYLDPAVIQ--PQVKPVLEKLNVDPDVDVKYFASEAIAGIA 147
+ V K L M +Y+ V P+L ++ D + A +A+A +A
Sbjct: 1162 QNGVLKALSFMFEYIGEMAKDYIYAVVPLLIDALMERDQVHRQIAVDAVAHLA 1214
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 33.5 bits (73), Expect = 0.20
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Frame = -2
Query: 680 ELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKL 501
+LA D + RVR +I + +A LGQE DE L + D +R ++L
Sbjct: 870 KLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDF 929
Query: 500 VEQYGPQWAENNV--IPKVLNM-----SHEQNYLHRMTYLFCINVLSEVCG----KDITT 354
V+ P+ + + +P+ + + QN R + I+ LS++C +D+
Sbjct: 930 VKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGDWRSRFEL-ISQLSKLCSLYSIQDVNF 988
Query: 353 RVLLPTVLSMADDNVANVR 297
+ L++ADD VA VR
Sbjct: 989 H-MSGIALTLADDRVAEVR 1006
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/122 (20%), Positives = 51/122 (41%)
Frame = -2
Query: 791 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 612
L+ EC + +IS + + + L + LP ++ +D VR + + L
Sbjct: 231 LRMECVQALCQVIS----YDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGN 286
Query: 611 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 432
GQ+F + L ++ D +A+R+ A K+ E Q + + P + + ++
Sbjct: 287 MFGQKFTEVFLVPHLITLSCDMTWAVRKVACEIFVKVAECASNQVRIDILSPNFVRLLND 346
Query: 431 QN 426
N
Sbjct: 347 PN 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -2
Query: 833 RTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWR 654
R ++ LP F LKD VR + + + + G + L+P ++ L+ D W
Sbjct: 252 RWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLITLSCDMTWA 311
Query: 653 VRLAIIE 633
VR E
Sbjct: 312 VRKVACE 318
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 861 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 918
Query: 299 RFNVAKTLQIMAKYLDP 249
R + L K+L P
Sbjct: 919 RNGILIHLYDFVKFLSP 935
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = -2
Query: 827 TIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSL--LPAIVEL------- 675
T E LLP+F D+ P+VR I+ +L + + ++ + + LP +
Sbjct: 899 TDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQ 958
Query: 674 AEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLV 498
A++ WR R +I + L + + ++ + ++ D V +R A + + +V
Sbjct: 959 AQNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIV 1017
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 33.5 bits (73), Expect = 0.20
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Frame = -2
Query: 680 ELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKL 501
+LA D + RVR +I + +A LGQE DE L + D +R ++L
Sbjct: 996 KLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDF 1055
Query: 500 VEQYGPQWAENNV--IPKVLNM-----SHEQNYLHRMTYLFCINVLSEVCG----KDITT 354
V+ P+ + + +P+ + + QN R + I+ LS++C +D+
Sbjct: 1056 VKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGDWRSRFEL-ISQLSKLCSLYSIQDVNF 1114
Query: 353 RVLLPTVLSMADDNVANVR 297
+ L++ADD VA VR
Sbjct: 1115 H-MSGIALTLADDRVAEVR 1132
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/122 (20%), Positives = 51/122 (41%)
Frame = -2
Query: 791 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 612
L+ EC + +IS + + + L + LP ++ +D VR + + L
Sbjct: 231 LRMECVQALCQVIS----YDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGN 286
Query: 611 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 432
GQ+F + L ++ D +A+R+ A K+ E Q + + P + + ++
Sbjct: 287 MFGQKFTEVFLVPHLITLSCDMTWAVRKVACEIFVKVAECASNQVRIDILSPNFVRLLND 346
Query: 431 QN 426
N
Sbjct: 347 PN 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -2
Query: 833 RTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWR 654
R ++ LP F LKD VR + + + + G + L+P ++ L+ D W
Sbjct: 252 RWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLITLSCDMTWA 311
Query: 653 VRLAIIE 633
VR E
Sbjct: 312 VRKVACE 318
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 987 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 1044
Query: 299 RFNVAKTLQIMAKYLDP 249
R + L K+L P
Sbjct: 1045 RNGILIHLYDFVKFLSP 1061
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = -2
Query: 827 TIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSL--LPAIVEL------- 675
T E LLP+F D+ P+VR I+ +L + + ++ + + LP +
Sbjct: 1025 TDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQ 1084
Query: 674 AEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLV 498
A++ WR R +I + L + + ++ + ++ D V +R A + + +V
Sbjct: 1085 AQNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIV 1143
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 33.5 bits (73), Expect = 0.20
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Frame = -2
Query: 680 ELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKL 501
+LA D + RVR +I + +A LGQE DE L + D +R ++L
Sbjct: 870 KLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDF 929
Query: 500 VEQYGPQWAENNV--IPKVLNM-----SHEQNYLHRMTYLFCINVLSEVCG----KDITT 354
V+ P+ + + +P+ + + QN R + I+ LS++C +D+
Sbjct: 930 VKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGDWRSRFEL-ISQLSKLCSLYSIQDVNF 988
Query: 353 RVLLPTVLSMADDNVANVR 297
+ L++ADD VA VR
Sbjct: 989 H-MSGIALTLADDRVAEVR 1006
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/122 (20%), Positives = 51/122 (41%)
Frame = -2
Query: 791 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 612
L+ EC + +IS + + + L + LP ++ +D VR + + L
Sbjct: 231 LRMECVQALCQVIS----YDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGN 286
Query: 611 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 432
GQ+F + L ++ D +A+R+ A K+ E Q + + P + + ++
Sbjct: 287 MFGQKFTEVFLVPHLITLSCDMTWAVRKVACEIFVKVAECASNQVRIDILSPNFVRLLND 346
Query: 431 QN 426
N
Sbjct: 347 PN 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -2
Query: 833 RTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWR 654
R ++ LP F LKD VR + + + + G + L+P ++ L+ D W
Sbjct: 252 RWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLITLSCDMTWA 311
Query: 653 VRLAIIE 633
VR E
Sbjct: 312 VRKVACE 318
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 861 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 918
Query: 299 RFNVAKTLQIMAKYLDP 249
R + L K+L P
Sbjct: 919 RNGILIHLYDFVKFLSP 935
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = -2
Query: 827 TIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSL--LPAIVEL------- 675
T E LLP+F D+ P+VR I+ +L + + ++ + + LP +
Sbjct: 899 TDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQ 958
Query: 674 AEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLV 498
A++ WR R +I + L + + ++ + ++ D V +R A + + +V
Sbjct: 959 AQNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIV 1017
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 33.5 bits (73), Expect = 0.20
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Frame = -2
Query: 680 ELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKL 501
+LA D + RVR +I + +A LGQE DE L + D +R ++L
Sbjct: 996 KLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDF 1055
Query: 500 VEQYGPQWAENNV--IPKVLNM-----SHEQNYLHRMTYLFCINVLSEVCG----KDITT 354
V+ P+ + + +P+ + + QN R + I+ LS++C +D+
Sbjct: 1056 VKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGDWRSRFEL-ISQLSKLCSLYSIQDVNF 1114
Query: 353 RVLLPTVLSMADDNVANVR 297
+ L++ADD VA VR
Sbjct: 1115 H-MSGIALTLADDRVAEVR 1132
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/122 (20%), Positives = 51/122 (41%)
Frame = -2
Query: 791 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 612
L+ EC + +IS + + + L + LP ++ +D VR + + L
Sbjct: 231 LRMECVQALCQVIS----YDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGN 286
Query: 611 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 432
GQ+F + L ++ D +A+R+ A K+ E Q + + P + + ++
Sbjct: 287 MFGQKFTEVFLVPHLITLSCDMTWAVRKVACEIFVKVAECASNQVRIDILSPNFVRLLND 346
Query: 431 QN 426
N
Sbjct: 347 PN 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -2
Query: 833 RTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWR 654
R ++ LP F LKD VR + + + + G + L+P ++ L+ D W
Sbjct: 252 RWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLITLSCDMTWA 311
Query: 653 VRLAIIE 633
VR E
Sbjct: 312 VRKVACE 318
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 479 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 300
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 987 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 1044
Query: 299 RFNVAKTLQIMAKYLDP 249
R + L K+L P
Sbjct: 1045 RNGILIHLYDFVKFLSP 1061
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = -2
Query: 827 TIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSL--LPAIVEL------- 675
T E LLP+F D+ P+VR I+ +L + + ++ + + LP +
Sbjct: 1025 TDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQ 1084
Query: 674 AEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLV 498
A++ WR R +I + L + + ++ + ++ D V +R A + + +V
Sbjct: 1085 AQNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIV 1143
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 31.1 bits (67), Expect = 1.1
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Frame = -2
Query: 719 IQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVY 540
+QQ+ + LL L + WR A ++ + L + +E + L +++ V
Sbjct: 534 VQQVDRLLLGCNQILRTSSSWRSHEAFLKSLKTLTNCIDEEVIIDTFVPLLRKEVLN-VR 592
Query: 539 AI--REAATLNLKKLVEQYGPQWAENNVIPKVLN--MSHEQNYLHRMTYLFCINVLSEVC 372
AI R AA L L++ ++ + N +S R+TY+ ++ V
Sbjct: 593 AIPCRIAACETLLILLKSISKADTRTEIM-QFFNEELSTHSCCYRRITYIDVAELVLSVF 651
Query: 371 GKDITTRVLLPTVLSMADDNVANVRFNVAKTL-QIMAKYLDP 249
K I + L L + D V+N+R K L +I +K + P
Sbjct: 652 SKRIFIQHFLDDTLRLTSDPVSNIRIRAIKFLPKIKSKLILP 693
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 31.1 bits (67), Expect = 1.1
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Frame = -2
Query: 719 IQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVY 540
+QQ+ + LL L + WR A ++ + L + +E + L +++ V
Sbjct: 534 VQQVDRLLLGCNQILRTSSSWRSHEAFLKSLKTLTNCIDEEVIIDTFVPLLRKEVLN-VR 592
Query: 539 AI--REAATLNLKKLVEQYGPQWAENNVIPKVLN--MSHEQNYLHRMTYLFCINVLSEVC 372
AI R AA L L++ ++ + N +S R+TY+ ++ V
Sbjct: 593 AIPCRIAACETLLILLKSISKADTRTEIM-QFFNEELSTHSCCYRRITYIDVAELVLSVF 651
Query: 371 GKDITTRVLLPTVLSMADDNVANVRFNVAKTL-QIMAKYLDP 249
K I + L L + D V+N+R K L +I +K + P
Sbjct: 652 SKRIFIQHFLDDTLRLTSDPVSNIRIRAIKFLPKIKSKLILP 693
>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical protein
F18C5.3 protein.
Length = 1490
Score = 30.3 bits (65), Expect = 1.9
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Frame = -2
Query: 653 VRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWA 474
+ LAI++ + L + + + LC + ++ H Y +RE A L ++V+ GP++
Sbjct: 611 IALAIVKLLQKLPDAVTGKHLHGVILKLC-NLMMTHSYDVRETARKTLVQIVKCLGPKYL 669
Query: 473 ENNVIPKVLNMSHE-QNYLHRMTYLFCINVLSEVC-GKDITTRVLLPTVLSMADDNVANV 300
+ + L M+ Q ++ + I + EV G ++ T + + + + D A
Sbjct: 670 ASVITEISLTMTKGFQVHVAIFSVHTLIVAMREVTKGGELDTAINVIVKMCIRDQFAAED 729
Query: 299 RFNVA--------------KTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYFASEA 162
+ N A + +Q + + + PA IQ + P + +N P S+
Sbjct: 730 KENGAVKAECPEAKGNRAPEMMQHLGRIVSPAGIQMVLAPFRDVVNEHPSAKAVQRVSDL 789
Query: 161 IAGIAG 144
++ AG
Sbjct: 790 LSKFAG 795
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/122 (20%), Positives = 51/122 (41%)
Frame = -2
Query: 791 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 612
L+ EC + +IS + + + L + LP ++ +D VR + + L
Sbjct: 231 LRMECVQALCQVIS----YDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGN 286
Query: 611 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 432
GQ+F + L ++ D +A+R+ A K+ E Q + + P + + ++
Sbjct: 287 MFGQKFTEVFLVPHLITLSCDMTWAVRKVACEIFVKVAECASNQVRIDILSPNFVRLLND 346
Query: 431 QN 426
N
Sbjct: 347 PN 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -2
Query: 833 RTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWR 654
R ++ LP F LKD VR + + + + G + L+P ++ L+ D W
Sbjct: 252 RWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLITLSCDMTWA 311
Query: 653 VRLAIIE 633
VR E
Sbjct: 312 VRKVACE 318
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 102 TCCRTCCC--TRCCTCCRPCC 120
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/122 (20%), Positives = 51/122 (41%)
Frame = -2
Query: 791 LKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAG 612
L+ EC + +IS + + + L + LP ++ +D VR + + L
Sbjct: 231 LRMECVQALCQVIS----YDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGN 286
Query: 611 QLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHE 432
GQ+F + L ++ D +A+R+ A K+ E Q + + P + + ++
Sbjct: 287 MFGQKFTEVFLVPHLITLSCDMTWAVRKVACEIFVKVAECASNQVRIDILSPNFVRLLND 346
Query: 431 QN 426
N
Sbjct: 347 PN 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -2
Query: 833 RTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWR 654
R ++ LP F LKD VR + + + + G + L+P ++ L+ D W
Sbjct: 252 RWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLITLSCDMTWA 311
Query: 653 VRLAIIE 633
VR E
Sbjct: 312 VRKVACE 318
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 84 TCCRTCCC--TRCCTCCRPCC 102
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 100 TCCRTCCC--TRCCTCCRPCC 118
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 86 TCCRTCCC--TRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 89 TCCRTCCC--TRCCTCCRPCC 107
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 101 TCCRTCCC--TRCCTCCRPCC 119
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -3
Query: 388 CC-PKCAARTSRPGCCCRPCC 329
CC PKC R CCR CC
Sbjct: 87 CCRPKCCCCCRRCCTCCRTCC 107
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 101 TCCRTCCC--TRCCTCCRPCC 119
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 391 TCCPKCAARTSRPGCCCRPCC 329
TCC C +R CCRPCC
Sbjct: 102 TCCRTCCC--TRCCTCCRPCC 120
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
ZK430.1 protein.
Length = 1650
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -2
Query: 839 ADRTTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIG--IQQLVQSLLPAIVELAED 666
AD + LL + + +D ++R + LE + + IG +Q + LLP + EL ED
Sbjct: 1560 ADPDSFPELLNKIMLKTRDSRAKIRYRALIVLELLIKEIGDGVQPHLSILLPFLNELIED 1619
Query: 665 TKWRVRLAIIEHMPLLAGQLGQEFF 591
+V + + L + G+ F+
Sbjct: 1620 ENKQVEAQCQKVINSLQHKFGETFW 1644
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 551 DHVYAIREAATLNLKKLVEQYGPQW-AENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEV 375
D YAI T ++KL+E+Y + + I ++LN HE H + I
Sbjct: 780 DMDYAILPVDTQLIEKLIEKYISNGKVQFSEIRRLLNQEHEFETHHAAYFYEAIRKFPTT 839
Query: 374 CGKDITTRVLLPTVLS 327
G + +PTV S
Sbjct: 840 LGLPLIVSGKIPTVFS 855
>AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal
acetylcholinesterase protein2 protein.
Length = 629
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 438 RHVQYFGYDVVLCPLRPVLLHQLLQVEGRSLADGVHVVHQP 560
RH+ Y V C V L + ++E RS+ G HVVH P
Sbjct: 8 RHLTYH----VFCQFALVTLFIVRRIEPRSIVRGDHVVHTP 44
>AF025378-1|AAC14016.2| 629|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 629
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 438 RHVQYFGYDVVLCPLRPVLLHQLLQVEGRSLADGVHVVHQP 560
RH+ Y V C V L + ++E RS+ G HVVH P
Sbjct: 8 RHLTYH----VFCQFALVTLFIVRRIEPRSIVRGDHVVHTP 44
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 446 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTV 333
N+S EQ+ R T+L C+ V+S +C T LL +
Sbjct: 1274 NVSEEQD---RKTFLLCLTVISAICNILFTLECLLKMI 1308
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 446 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTV 333
N+S EQ+ R T+L C+ V+S +C T LL +
Sbjct: 1252 NVSEEQD---RKTFLLCLTVISAICNILFTLECLLKMI 1286
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 446 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTV 333
N+S EQ+ R T+L C+ V+S +C T LL +
Sbjct: 1274 NVSEEQD---RKTFLLCLTVISAICNILFTLECLLKMI 1308
>AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical
protein Y80D3A.9 protein.
Length = 279
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 707 VQSLLPAIVELAEDTKWRVRLAIIE----HMPLLAGQLGQEFFDEKL 579
VQSL +V+ E +KW + + H+P + G + F+EKL
Sbjct: 131 VQSLTNQLVDQIEISKWNDKFHVFSNSPPHVPFKKTEFGLKMFEEKL 177
>AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical
protein H17B01.4b protein.
Length = 395
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 489 VLLHQLLQVEGRSLADGVHVVHQPRHAQAGQLLV 590
VL HQL E +S +HV +Q H +G+ LV
Sbjct: 114 VLAHQLPISEQKSEIQAIHVTNQRLHVASGRTLV 147
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 489 VLLHQLLQVEGRSLADGVHVVHQPRHAQAGQLLV 590
VL HQL E +S +HV +Q H +G+ LV
Sbjct: 114 VLAHQLPISEQKSEIQAIHVTNQRLHVASGRTLV 147
>U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical
protein C17H11.2 protein.
Length = 738
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 636 DDGQTDPPLGVLCQLHDGGEERLHQLLDADHFIHTLEVGDYVESD 770
DDG + P L + D EE + L ++H + T+E+ D E +
Sbjct: 267 DDGYSAPKRRRLIEDDDEEEESMRYLDPSEHPVDTIELDDITEDE 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,359,145
Number of Sequences: 27780
Number of extensions: 422879
Number of successful extensions: 1688
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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