Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17c06
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16RN6 Cluster: Adp,atp carrier protein; n=1; Aedes aeg...    45   0.002
UniRef50_P12236 Cluster: ADP/ATP translocase 3; n=11; Euteleosto...    41   0.032
UniRef50_P05141 Cluster: ADP/ATP translocase 2; n=61; Eukaryota|...    40   0.097
UniRef50_P12235 Cluster: ADP/ATP translocase 1; n=108; Eukaryota...    40   0.097
UniRef50_Q9H0C2 Cluster: ADP/ATP translocase 4; n=17; Eukaryota|...    36   0.90 
UniRef50_A0ZF82 Cluster: Non-ribosomal peptide synthase; n=2; No...    33   6.4  

>UniRef50_Q16RN6 Cluster: Adp,atp carrier protein; n=1; Aedes
           aegypti|Rep: Adp,atp carrier protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 257

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           VLRGTGGAFVLVLYDEIKKVL
Sbjct: 237 VLRGTGGAFVLVLYDEIKKVL 257


>UniRef50_P12236 Cluster: ADP/ATP translocase 3; n=11;
           Euteleostomi|Rep: ADP/ATP translocase 3 - Homo sapiens
           (Human)
          Length = 298

 Score = 41.1 bits (92), Expect = 0.032
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           VLRG GGAFVLVLYDE+KKV+
Sbjct: 278 VLRGMGGAFVLVLYDELKKVI 298


>UniRef50_P05141 Cluster: ADP/ATP translocase 2; n=61;
           Eukaryota|Rep: ADP/ATP translocase 2 - Homo sapiens
           (Human)
          Length = 298

 Score = 39.5 bits (88), Expect = 0.097
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKK 746
           VLRG GGAFVLVLYDEIKK
Sbjct: 278 VLRGMGGAFVLVLYDEIKK 296


>UniRef50_P12235 Cluster: ADP/ATP translocase 1; n=108;
           Eukaryota|Rep: ADP/ATP translocase 1 - Homo sapiens
           (Human)
          Length = 298

 Score = 39.5 bits (88), Expect = 0.097
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKK 746
           VLRG GGAFVLVLYDEIKK
Sbjct: 278 VLRGMGGAFVLVLYDEIKK 296


>UniRef50_Q9H0C2 Cluster: ADP/ATP translocase 4; n=17;
           Eukaryota|Rep: ADP/ATP translocase 4 - Homo sapiens
           (Human)
          Length = 315

 Score = 36.3 bits (80), Expect = 0.90
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKK 746
           VLRGTGGA VLVLYD+IK+
Sbjct: 288 VLRGTGGALVLVLYDKIKE 306


>UniRef50_A0ZF82 Cluster: Non-ribosomal peptide synthase; n=2;
           Nostocaceae|Rep: Non-ribosomal peptide synthase -
           Nodularia spumigena CCY 9414
          Length = 1394

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
 Frame = -1

Query: 569 IACPN*SDILPL*KFSNFDISIAFIL-YNLFLIQNEK*LVFFM*HYIV---WAAAVM*LT 402
           + CPN  D++      +FD++I  +    L  +Q++K ++    H+I+   W+  V    
Sbjct: 171 LQCPNIQDLIDAHAQEHFDLNIGLLFKAKLLQLQDQKSVLVINMHHIISDGWSMGVFVRE 230

Query: 401 SFQS-GAGGQG*TKNCSELHIKRS 333
             Q+  A  QG T N S LHI+ S
Sbjct: 231 LRQAYTAYSQGQTPNLSPLHIQYS 254


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,107,113
Number of Sequences: 1657284
Number of extensions: 12790551
Number of successful extensions: 19050
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19048
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)