Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17c06
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10618-2|CAA71628.1|  299|Drosophila melanogaster ADP/ATP transl...    45   1e-04
S71762-1|AAB31734.3|  297|Drosophila melanogaster ADP/ATP transl...    45   1e-04
S43651-1|AAB23114.1|  297|Drosophila melanogaster ADP/ATP transl...    45   1e-04
BT011069-1|AAR31140.1|  299|Drosophila melanogaster GH27591p pro...    45   1e-04
AY070894-1|AAL48516.1|  299|Drosophila melanogaster LP02726p pro...    45   1e-04
AY060978-1|AAL28526.1|  299|Drosophila melanogaster GM12886p pro...    45   1e-04
AE014298-1497|AAF47957.1|  299|Drosophila melanogaster CG16944-P...    45   1e-04
AE014298-1496|AAG22341.1|  299|Drosophila melanogaster CG16944-P...    45   1e-04
AE014298-1495|AAN09268.1|  312|Drosophila melanogaster CG16944-P...    45   1e-04
AE014298-1494|AAN09267.1|  312|Drosophila melanogaster CG16944-P...    45   1e-04
Y10618-1|CAA71629.1|  307|Drosophila melanogaster ADP/ATP transl...    36   0.086
AE014298-1493|AAO41648.1|  307|Drosophila melanogaster CG1683-PB...    36   0.086
AE014298-1492|AAF47956.1|  307|Drosophila melanogaster CG1683-PA...    36   0.086
AY118292-1|AAM48321.1|  262|Drosophila melanogaster GH01164p pro...    29   7.4  
AE014297-1053|AAF54462.1|  262|Drosophila melanogaster CG16904-P...    29   7.4  

>Y10618-2|CAA71628.1|  299|Drosophila melanogaster ADP/ATP
           translocase protein.
          Length = 299

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 279 ILRGTGGAFVLVLYDEIKKVL 299


>S71762-1|AAB31734.3|  297|Drosophila melanogaster ADP/ATP
           translocase protein.
          Length = 297

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 277 ILRGTGGAFVLVLYDEIKKVL 297


>S43651-1|AAB23114.1|  297|Drosophila melanogaster ADP/ATP
           translocase protein.
          Length = 297

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 277 ILRGTGGAFVLVLYDEIKKVL 297


>BT011069-1|AAR31140.1|  299|Drosophila melanogaster GH27591p
           protein.
          Length = 299

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 279 ILRGTGGAFVLVLYDEIKKVL 299


>AY070894-1|AAL48516.1|  299|Drosophila melanogaster LP02726p
           protein.
          Length = 299

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 279 ILRGTGGAFVLVLYDEIKKVL 299


>AY060978-1|AAL28526.1|  299|Drosophila melanogaster GM12886p
           protein.
          Length = 299

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 279 ILRGTGGAFVLVLYDEIKKVL 299


>AE014298-1497|AAF47957.1|  299|Drosophila melanogaster CG16944-PB,
           isoform B protein.
          Length = 299

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 279 ILRGTGGAFVLVLYDEIKKVL 299


>AE014298-1496|AAG22341.1|  299|Drosophila melanogaster CG16944-PA,
           isoform A protein.
          Length = 299

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 279 ILRGTGGAFVLVLYDEIKKVL 299


>AE014298-1495|AAN09268.1|  312|Drosophila melanogaster CG16944-PD,
           isoform D protein.
          Length = 312

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 292 ILRGTGGAFVLVLYDEIKKVL 312


>AE014298-1494|AAN09267.1|  312|Drosophila melanogaster CG16944-PC,
           isoform C protein.
          Length = 312

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKKVL 740
           +LRGTGGAFVLVLYDEIKKVL
Sbjct: 292 ILRGTGGAFVLVLYDEIKKVL 312


>Y10618-1|CAA71629.1|  307|Drosophila melanogaster ADP/ATP
           translocase protein.
          Length = 307

 Score = 35.5 bits (78), Expect = 0.086
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKK 746
           ++RGTGGA VL LYDE+KK
Sbjct: 287 IIRGTGGALVLALYDEMKK 305


>AE014298-1493|AAO41648.1|  307|Drosophila melanogaster CG1683-PB,
           isoform B protein.
          Length = 307

 Score = 35.5 bits (78), Expect = 0.086
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKK 746
           ++RGTGGA VL LYDE+KK
Sbjct: 287 IIRGTGGALVLALYDEMKK 305


>AE014298-1492|AAF47956.1|  307|Drosophila melanogaster CG1683-PA,
           isoform A protein.
          Length = 307

 Score = 35.5 bits (78), Expect = 0.086
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -2

Query: 802 VLRGTGGAFVLVLYDEIKK 746
           ++RGTGGA VL LYDE+KK
Sbjct: 287 IIRGTGGALVLALYDEMKK 305


>AY118292-1|AAM48321.1|  262|Drosophila melanogaster GH01164p
           protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 698 SVSQPLPSDHVLLDTKTTLVTYF*LNKVL-YNDSIIYCFIK 579
           S  Q LP DH L  T+ TL   + LNKVL   D+I +   K
Sbjct: 86  SCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRK 126


>AE014297-1053|AAF54462.1|  262|Drosophila melanogaster CG16904-PA
           protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 698 SVSQPLPSDHVLLDTKTTLVTYF*LNKVL-YNDSIIYCFIK 579
           S  Q LP DH L  T+ TL   + LNKVL   D+I +   K
Sbjct: 86  SCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRK 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,654,609
Number of Sequences: 53049
Number of extensions: 612182
Number of successful extensions: 888
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)