Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17c02
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    26   1.7  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    25   2.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.8  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   6.7  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   8.9  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 459 VLTSAHCCSRCAGR 418
           +LT+AHC + C GR
Sbjct: 372 ILTTAHCVTNCGGR 385


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 371 LENEHHLCMPLKIYHKRPAHREQQ*ALVST 460
           L+ ++HL   L + H++    EQQ A +ST
Sbjct: 33  LQQQYHLQAQLNLVHQQQLALEQQSAAIST 62


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 299 RDHYSMSLKKVKMD*YQLTRPLRWLENEHHLCMPLKIYHKRP 424
           +D Y+    ++ +  +Q  R    L ++HH C  LK++   P
Sbjct: 674 QDFYANEETRICLPCHQECRGCHGLGDDHHECRNLKLFEGDP 715


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = +1

Query: 115 VHFSKNQMQLTQVYRGKFFFLYIFVFSATYQFLD*NFNIIKYVYKK 252
           +HF++   +   +Y+GK  F+ +++ + T   L  +  +IK ++ K
Sbjct: 54  IHFTEEVERYYAIYKGKHPFMGVYMLT-TPVVLPLDLELIKAIFVK 98


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 710 RVIGELDVLMCFCNFCN 660
           R IGE DV+M F N  N
Sbjct: 113 RAIGESDVIMSFLNKAN 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,228
Number of Sequences: 2352
Number of extensions: 16145
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)