Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17b18
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH0645... 412 e-115
AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-P... 412 e-115
AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p pro... 107 1e-23
AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA... 107 1e-23
AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p pro... 73 4e-13
AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA... 73 4e-13
AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRN... 72 1e-12
AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p pro... 44 3e-04
AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-P... 44 3e-04
AY089547-1|AAL90285.1| 574|Drosophila melanogaster LD23509p pro... 36 0.053
AE014298-1351|AAF46510.2| 607|Drosophila melanogaster CG12141-P... 36 0.053
AE014298-1350|AAN09255.1| 574|Drosophila melanogaster CG12141-P... 36 0.053
AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA... 29 8.0
>AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH06451
protein.
Length = 558
Score = 412 bits (1014), Expect = e-115
Identities = 188/268 (70%), Positives = 214/268 (79%)
Frame = -1
Query: 844 GSTLFKFSYFGEEAYLTQSFQLYLETCLATXGDVYCIAQSYRAEQSRTRRHLAEYSHVEA 665
GSTLFK YFGEEAYLTQS QLYLETCL GDV+ I+QSYRAEQSRTRRHLAEY+HVEA
Sbjct: 291 GSTLFKLKYFGEEAYLTQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEA 350
Query: 664 ECPFITFXXXXXXXXXXXXXXXXXXLASPEGQLVYELXXXXXXXXXXXKRMTYIEAIEYL 485
ECPF+TF L SP G LV EL +RM Y +AI++L
Sbjct: 351 ECPFLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWL 410
Query: 484 RANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTE 305
+ NN+TK+DG+FYEFGEDIPE PERKMTD I PI+LC+FPAEIKSFYM RC +D+RLTE
Sbjct: 411 KENNVTKDDGTFYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470
Query: 304 SVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGL 125
SVDVL+P VGEIVGGSMRI+D EEL++GYKREGIDP PYYWYTDQR +G++PHGGYGLGL
Sbjct: 471 SVDVLLPNVGEIVGGSMRIYDSEELLKGYKREGIDPQPYYWYTDQRVYGTMPHGGYGLGL 530
Query: 124 ERFLCWLLDRYHIRDVCLYPRFLERCTP 41
ERFLCWLL+RYHIR+VCLYPRFL+RC P
Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRCRP 558
>AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-PA
protein.
Length = 558
Score = 412 bits (1014), Expect = e-115
Identities = 188/268 (70%), Positives = 214/268 (79%)
Frame = -1
Query: 844 GSTLFKFSYFGEEAYLTQSFQLYLETCLATXGDVYCIAQSYRAEQSRTRRHLAEYSHVEA 665
GSTLFK YFGEEAYLTQS QLYLETCL GDV+ I+QSYRAEQSRTRRHLAEY+HVEA
Sbjct: 291 GSTLFKLKYFGEEAYLTQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEA 350
Query: 664 ECPFITFXXXXXXXXXXXXXXXXXXLASPEGQLVYELXXXXXXXXXXXKRMTYIEAIEYL 485
ECPF+TF L SP G LV EL +RM Y +AI++L
Sbjct: 351 ECPFLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWL 410
Query: 484 RANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTE 305
+ NN+TK+DG+FYEFGEDIPE PERKMTD I PI+LC+FPAEIKSFYM RC +D+RLTE
Sbjct: 411 KENNVTKDDGTFYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470
Query: 304 SVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGL 125
SVDVL+P VGEIVGGSMRI+D EEL++GYKREGIDP PYYWYTDQR +G++PHGGYGLGL
Sbjct: 471 SVDVLLPNVGEIVGGSMRIYDSEELLKGYKREGIDPQPYYWYTDQRVYGTMPHGGYGLGL 530
Query: 124 ERFLCWLLDRYHIRDVCLYPRFLERCTP 41
ERFLCWLL+RYHIR+VCLYPRFL+RC P
Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRCRP 558
>AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p
protein.
Length = 460
Score = 107 bits (258), Expect = 1e-23
Identities = 78/265 (29%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Frame = -1
Query: 823 SYFGEEAYLTQSFQLYLETCLATXGDVYCIAQSYRAEQSRTRRHLAEYSHVEAECPFITF 644
SYF + +L+ S QL+LE G Y ++ ++RAE S++ HLAE+ EAE +
Sbjct: 200 SYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHLAEFYMFEAELAHLEE 259
Query: 643 XXXXXXXXXXXXXXXXXXLASPEGQ-LVYELXXXXXXXXXXXKR-----MTYIEAIEYLR 482
L G+ L + + M+Y EA++ L+
Sbjct: 260 MEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQVPWKIMSYDEALQVLQ 319
Query: 481 ANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTES 302
N + + E + E + G P+ + +PA+ K FYM + +
Sbjct: 320 ENKDSLKTP--ISLNEGFSKDQELFLVAHCGAPVFVVDWPAQQKPFYMKVSRSNPNRVHA 377
Query: 301 VDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGLE 122
+D+LMP VGE+ GGS+R D L K P WY D RK+G VP GG+G+G E
Sbjct: 378 LDLLMPAVGELCGGSLRESDPAIL----KSHPHLPKDLEWYVDLRKYGGVPTGGFGMGFE 433
Query: 121 RFLCWLLDRYHIRDVCLYPRFLERC 47
R+L + +IRDV +PR+ C
Sbjct: 434 RYLQLVTGVKNIRDVIPFPRYPHSC 458
>AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA
protein.
Length = 460
Score = 107 bits (258), Expect = 1e-23
Identities = 78/265 (29%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Frame = -1
Query: 823 SYFGEEAYLTQSFQLYLETCLATXGDVYCIAQSYRAEQSRTRRHLAEYSHVEAECPFITF 644
SYF + +L+ S QL+LE G Y ++ ++RAE S++ HLAE+ EAE +
Sbjct: 200 SYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHLAEFYMFEAELAHLEE 259
Query: 643 XXXXXXXXXXXXXXXXXXLASPEGQ-LVYELXXXXXXXXXXXKR-----MTYIEAIEYLR 482
L G+ L + + M+Y EA++ L+
Sbjct: 260 MEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQVPWKIMSYDEALQVLQ 319
Query: 481 ANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTES 302
N + + E + E + G P+ + +PA+ K FYM + +
Sbjct: 320 ENKDSLKTP--ISLNEGFSKDQELFLVAHCGAPVFVVDWPAQQKPFYMKVSRSNPNRVHA 377
Query: 301 VDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGLE 122
+D+LMP VGE+ GGS+R D L K P WY D RK+G VP GG+G+G E
Sbjct: 378 LDLLMPAVGELCGGSLRESDPAIL----KSHPHLPKDLEWYVDLRKYGGVPTGGFGMGFE 433
Query: 121 RFLCWLLDRYHIRDVCLYPRFLERC 47
R+L + +IRDV +PR+ C
Sbjct: 434 RYLQLVTGVKNIRDVIPFPRYPHSC 458
>AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p
protein.
Length = 531
Score = 73.3 bits (172), Expect = 4e-13
Identities = 42/113 (37%), Positives = 61/113 (53%)
Frame = -1
Query: 379 LLCKFPAEIKSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 200
+L KFP I+ FY ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 199 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 41
S Y + ++G PH G G+G+ER + L +IR ++PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
Score = 56.0 bits (129), Expect = 6e-08
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -1
Query: 844 GSTLFKFSYFGEEAYLTQSFQLYLETCLATXGD-VYCIAQSYRAEQSRTRRHLAEYSHVE 668
G+ +F SYF + AYL QS QLY + +A D VY + +RAE S T RHL E+ ++
Sbjct: 261 GANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 320
Query: 667 AECPF 653
E F
Sbjct: 321 LEMAF 325
>AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA
protein.
Length = 531
Score = 73.3 bits (172), Expect = 4e-13
Identities = 42/113 (37%), Positives = 61/113 (53%)
Frame = -1
Query: 379 LLCKFPAEIKSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 200
+L KFP I+ FY ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 199 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 41
S Y + ++G PH G G+G+ER + L +IR ++PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
Score = 56.0 bits (129), Expect = 6e-08
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -1
Query: 844 GSTLFKFSYFGEEAYLTQSFQLYLETCLATXGD-VYCIAQSYRAEQSRTRRHLAEYSHVE 668
G+ +F SYF + AYL QS QLY + +A D VY + +RAE S T RHL E+ ++
Sbjct: 261 GANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 320
Query: 667 AECPF 653
E F
Sbjct: 321 LEMAF 325
>AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRNA
synthetase protein.
Length = 531
Score = 71.7 bits (168), Expect = 1e-12
Identities = 42/113 (37%), Positives = 60/113 (53%)
Frame = -1
Query: 379 LLCKFPAEIKSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 200
+L KFP I+ FY ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 199 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 41
S Y + ++G PH G G+G+ER + L +IR + PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMLPRDPKRLTP 531
Score = 56.0 bits (129), Expect = 6e-08
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -1
Query: 844 GSTLFKFSYFGEEAYLTQSFQLYLETCLATXGD-VYCIAQSYRAEQSRTRRHLAEYSHVE 668
G+ +F SYF + AYL QS QLY + +A D VY + +RAE S T RHL E+ ++
Sbjct: 261 GANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 320
Query: 667 AECPF 653
E F
Sbjct: 321 LEMAF 325
>AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p protein.
Length = 1082
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -1
Query: 310 TESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYT---DQRKFGSVPHGG 140
+++ D+++ G E+ GGS+RI D + M+ + E I P+ + + G PHGG
Sbjct: 875 SQAYDLVLNGQ-EVGGGSIRIHDRD--MQHFILEQILKIPHDHLSHLLSALESGCPPHGG 931
Query: 139 YGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP*APLPDDVS 14
LGL+R + L IRDV +P+ L P + P +S
Sbjct: 932 IALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPIS 973
>AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-PA
protein.
Length = 1082
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -1
Query: 310 TESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYT---DQRKFGSVPHGG 140
+++ D+++ G E+ GGS+RI D + M+ + E I P+ + + G PHGG
Sbjct: 875 SQAYDLVLNGQ-EVGGGSIRIHDRD--MQHFILEQILKIPHDHLSHLLSALESGCPPHGG 931
Query: 139 YGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP*APLPDDVS 14
LGL+R + L IRDV +P+ L P + P +S
Sbjct: 932 IALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPIS 973
>AY089547-1|AAL90285.1| 574|Drosophila melanogaster LD23509p
protein.
Length = 574
Score = 36.3 bits (80), Expect = 0.053
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 166 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 65
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 521 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554
>AE014298-1351|AAF46510.2| 607|Drosophila melanogaster CG12141-PB,
isoform B protein.
Length = 607
Score = 36.3 bits (80), Expect = 0.053
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 166 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 65
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 554 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 587
>AE014298-1350|AAN09255.1| 574|Drosophila melanogaster CG12141-PA,
isoform A protein.
Length = 574
Score = 36.3 bits (80), Expect = 0.053
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 166 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 65
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 521 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554
>AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA
protein.
Length = 1906
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -1
Query: 466 KEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTESVDVLM 287
K+ G E+ E + + + + A+G L K K RC D+ +TES DVL+
Sbjct: 410 KKHGLVKEYSEQVGKSRQFRFV-AVGHLGDLSKEDEIKKKALEIRCKDEPNITESTDVLL 468
Query: 286 PGVGEIV 266
+ EIV
Sbjct: 469 KDLPEIV 475
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,489,921
Number of Sequences: 53049
Number of extensions: 599330
Number of successful extensions: 1633
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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