Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17b09
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   0.95 
AY341231-1|AAR13795.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  
AY341230-1|AAR13794.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  
AY341229-1|AAR13793.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  
AY341228-1|AAR13792.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  
AY341227-1|AAR13791.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  
AY341226-1|AAR13790.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  
AY341225-1|AAR13789.1|  231|Anopheles gambiae vacuolar ATPase pr...    25   2.9  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 26.6 bits (56), Expect = 0.95
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 716 CAIFL*-LDLRQSVFFVHKTRHVRAICQRMQKSNHRIAPRGSRARVEYFE 570
           CA++   LDL+ S   V +  H    C R  +   ++ P    AR+ + E
Sbjct: 6   CALYKQELDLQVSAKTVSRRLHAAGFCARRPRKVRKLLPHHVEARIRFAE 55


>AY341231-1|AAR13795.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


>AY341230-1|AAR13794.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


>AY341229-1|AAR13793.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


>AY341228-1|AAR13792.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


>AY341227-1|AAR13791.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


>AY341226-1|AAR13790.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


>AY341225-1|AAR13789.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 808 GMPXMLYVXLRTDYKNESDVINENNLITQI 719
           G P  +Y  L T Y+    V   N  ITQI
Sbjct: 158 GFPGYMYTDLATIYERAGRVEGRNGSITQI 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 889,119
Number of Sequences: 2352
Number of extensions: 18063
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)