Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17b02
(765 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56163 Cluster: PREDICTED: similar to COMM domai... 143 5e-33
UniRef50_Q86X83 Cluster: COMM domain-containing protein 2; n=19;... 105 2e-21
UniRef50_Q6DH33 Cluster: COMM domain containing 2; n=7; Coelomat... 104 2e-21
UniRef50_Q7QC18 Cluster: ENSANGP00000001214; n=2; Culicidae|Rep:... 92 1e-17
UniRef50_Q54P14 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-17
UniRef50_Q4SRW0 Cluster: Chromosome undetermined SCAF14488, whol... 83 1e-14
UniRef50_UPI0000E80BFA Cluster: PREDICTED: similar to My004 prot... 73 6e-12
UniRef50_Q9VEB2 Cluster: CG7168-PA; n=2; Sophophora|Rep: CG7168-... 68 3e-10
UniRef50_Q236D6 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_UPI0000E48DF6 Cluster: PREDICTED: similar to COMM domai... 49 1e-04
UniRef50_A0BQL3 Cluster: Chromosome undetermined scaffold_120, w... 46 0.001
UniRef50_UPI00015B5160 Cluster: PREDICTED: similar to BUP; n=1; ... 45 0.002
UniRef50_Q54DR0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.068
UniRef50_Q6LGW6 Cluster: Hypothetical conjugal transfer protein ... 39 0.16
UniRef50_UPI0000DA40E1 Cluster: PREDICTED: similar to COMM domai... 38 0.27
UniRef50_Q86IW8 Cluster: Similar to Mus musculus (Mouse). RIKEN ... 38 0.36
UniRef50_Q9UBI1 Cluster: COMM domain-containing protein 3; n=23;... 38 0.36
UniRef50_Q8IHU4 Cluster: Putative uncharacterized protein; n=2; ... 36 1.5
UniRef50_Q9CQ02 Cluster: COMM domain-containing protein 4; n=20;... 36 1.5
UniRef50_Q5E5K1 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q14QD2 Cluster: Hypothetical abc transporter permease c... 35 2.5
UniRef50_Q1NR95 Cluster: Flagellin-like:transferase hexapeptide ... 34 3.4
UniRef50_Q6BRI4 Cluster: Similar to CA5674|IPF1274 Candida albic... 34 3.4
UniRef50_Q6L0T2 Cluster: Hypothetical archaea-specific FeS oxido... 34 3.4
UniRef50_Q1NT76 Cluster: Flagellin-like:transferase hexapeptide ... 34 4.4
UniRef50_Q22DX5 Cluster: Chitin binding Peritrophin-A domain con... 33 5.9
UniRef50_A2DKR9 Cluster: K14 protein, putative; n=1; Trichomonas... 33 5.9
UniRef50_A6NDZ9 Cluster: Uncharacterized protein ENSP00000269230... 33 5.9
UniRef50_Q8ZZS3 Cluster: Putative uncharacterized protein PAE010... 33 5.9
UniRef50_UPI0000F1ED97 Cluster: PREDICTED: similar to putative T... 33 7.8
UniRef50_UPI0000499CE6 Cluster: DEAD/DEAH box helicase; n=1; Ent... 33 7.8
UniRef50_Q2AED1 Cluster: Fimbrial assembly; n=1; Halothermothrix... 33 7.8
>UniRef50_UPI0000D56163 Cluster: PREDICTED: similar to COMM domain
containing 2; n=3; Endopterygota|Rep: PREDICTED: similar
to COMM domain containing 2 - Tribolium castaneum
Length = 208
Score = 143 bits (346), Expect = 5e-33
Identities = 66/142 (46%), Positives = 96/142 (67%)
Frame = -3
Query: 679 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 500
K+HL LL SVQVLIDFCKLA++++ G N Y AAEKL V + ++N V LV L+
Sbjct: 10 KEHLGLLTSQSVQVLIDFCKLAIDFLQSGPNLKFYASAAEKLSVEVDAVQNCVYGLVNLL 69
Query: 499 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 320
L KH LSE+DFR S+ GFS +Q++++ K Y +KK E+ + L L N+P Y + W
Sbjct: 70 LLSCKHKLSEADFRDSILTLGFSPEQENILHKFYESKKAEIAQILNKLTVNEPHYDNLEW 129
Query: 319 RFEVQIASRNSNEGIKPVVTMD 254
RFEVQ++SR+ ++ + P++T+D
Sbjct: 130 RFEVQVSSRSLHQQVVPLMTLD 151
Score = 37.1 bits (82), Expect = 0.48
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = -3
Query: 112 HTLLQCDIPNLIHLTNKLDQALKESKSQXCTVKYQRS 2
H LLQ D+ NL H+T++L++AL ES+S+ + K QR+
Sbjct: 168 HHLLQTDVTNLQHITHELEKALNESRSRH-SRKIQRT 203
>UniRef50_Q86X83 Cluster: COMM domain-containing protein 2; n=19;
Tetrapoda|Rep: COMM domain-containing protein 2 - Homo
sapiens (Human)
Length = 199
Score = 105 bits (251), Expect = 2e-21
Identities = 54/141 (38%), Positives = 85/141 (60%)
Frame = -3
Query: 679 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 500
K+HL L + V+ +F ++AVE++ +GAN Y AA KL V T+++ V+ L YL+
Sbjct: 10 KEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLL 69
Query: 499 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 320
E SK +SE DF+ S+ + GFS + ++ +LY +KE+ L L + P Y + W
Sbjct: 70 TESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEW 129
Query: 319 RFEVQIASRNSNEGIKPVVTM 257
R +VQ+ASR+ + IKP VT+
Sbjct: 130 RLDVQLASRSLRQQIKPAVTI 150
Score = 33.1 bits (72), Expect = 7.8
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 127 QNNVNHT-LLQCDIPNLIHLTNKLDQALKESKSQXC 23
QN ++T +LQ D L+HL +L+QAL+E K+ C
Sbjct: 156 QNGDHNTKVLQTDPATLLHLVQQLEQALEEMKTNHC 191
>UniRef50_Q6DH33 Cluster: COMM domain containing 2; n=7;
Coelomata|Rep: COMM domain containing 2 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 199
Score = 104 bits (250), Expect = 2e-21
Identities = 53/141 (37%), Positives = 85/141 (60%)
Frame = -3
Query: 679 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 500
K+HL L E V+ +F ++AVE++ KG+N Y AA KL V ++++ V+ L++L+
Sbjct: 10 KEHLGFLSEVDPAVVGEFGRIAVEFLKKGSNPKIYEGAARKLSVSSESVQHGVEGLMFLL 69
Query: 499 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 320
E SK +SE DF+ S+ + GF D++ +LY +KE+ + L L + P+Y + W
Sbjct: 70 TESSKLMISELDFQDSVLVLGFPEQLNDLLLQLYLENRKEIRQILSKLAPSIPQYHNLEW 129
Query: 319 RFEVQIASRNSNEGIKPVVTM 257
R +VQ+ASR +KP VTM
Sbjct: 130 RLDVQLASRALRHQVKPTVTM 150
>UniRef50_Q7QC18 Cluster: ENSANGP00000001214; n=2; Culicidae|Rep:
ENSANGP00000001214 - Anopheles gambiae str. PEST
Length = 195
Score = 92.3 bits (219), Expect = 1e-17
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Frame = -3
Query: 682 QKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYL 503
Q L L + +VLI+FCKLA+EYIN G N K +AA+KL T+R ++ALV L
Sbjct: 9 QAKQLHFLLDQPEEVLIEFCKLAIEYINSGINEKKCTVAAKKLSTTYETVRGALEALVAL 68
Query: 502 ILEGSKHNLSESDFRS--SLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYID 329
+++ +K LSE +F + AL + Q +++ + +K+ + L+ +++ + D
Sbjct: 69 LIDSTKLALSEREFHTVVQAALETINEKQTEILWQFITSKRTLVDNVLRASCQDELYFRD 128
Query: 328 FAWRFEVQIASRNSNEGIKPVVTMDF 251
WR E +IASR PV+ M F
Sbjct: 129 LEWRIEGRIASRTIRSQATPVIKMKF 154
>UniRef50_Q54P14 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 200
Score = 91.9 bits (218), Expect = 2e-17
Identities = 44/145 (30%), Positives = 80/145 (55%)
Frame = -3
Query: 679 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 500
K L L S +++ +FCK+A+E+I KG+N Y A++KL + I +LV ++ YL
Sbjct: 10 KQDLSSLRSLSAEIISEFCKIALEFIKKGSNKKLYMGASQKLNIAADKIESLVDSITYLF 69
Query: 499 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 320
E ++ L+E+DF +LA S++ +++ + Y +K++ LQ + Y + W
Sbjct: 70 SECTRFMLNENDFNDTLAPIKLSDEVIEILRESYFDNRKDIRNTLQEFYPHLDHYQNLEW 129
Query: 319 RFEVQIASRNSNEGIKPVVTMDFVT 245
R + QIA+R+ I P+ + +T
Sbjct: 130 RLDTQIANRSLGSSINPIYLLKLIT 154
>UniRef50_Q4SRW0 Cluster: Chromosome undetermined SCAF14488, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14488, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 199
Score = 82.6 bits (195), Expect = 1e-14
Identities = 42/125 (33%), Positives = 68/125 (54%)
Frame = -3
Query: 679 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 500
+DHL LL E V+ +F ++A+E + +G ++ Y AA KL VP+ ++ V+ L+ L+
Sbjct: 10 RDHLALLTEVEPPVVAEFGRMALELLRRGTSTKTYEGAARKLAVPVDAVQRGVEGLLLLM 69
Query: 499 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 320
E SKH +SE DF S+ ++ V+ KLY + ++ L L P Y + W
Sbjct: 70 TESSKHLISEVDFLDSVLSLDLGDEVSQVLLKLYQEHRGQIRSTLHQLPHRLPAYHNLEW 129
Query: 319 RFEVQ 305
R +VQ
Sbjct: 130 RLDVQ 134
>UniRef50_UPI0000E80BFA Cluster: PREDICTED: similar to My004 protein
isoform 1; n=1; Gallus gallus|Rep: PREDICTED: similar to
My004 protein isoform 1 - Gallus gallus
Length = 222
Score = 73.3 bits (172), Expect = 6e-12
Identities = 42/126 (33%), Positives = 65/126 (51%)
Frame = -3
Query: 682 QKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYL 503
QK HL L + + LAVE + +GA A KL + T+++ V+ L+YL
Sbjct: 9 QKAHLGCLPRVGGAAIGELGYLAVELLRRGAAPKACEAVARKLNAGVDTVQHGVEGLMYL 68
Query: 502 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 323
+ E SK +SE DF+ S+ + GFS++ ++ +LY +KE+ L L P Y
Sbjct: 69 LTESSKLMISEMDFQDSIHVLGFSDELNKLLLQLYLDNRKEIRSILGELAPKLPSYHSLE 128
Query: 322 WRFEVQ 305
WR +VQ
Sbjct: 129 WRLDVQ 134
>UniRef50_Q9VEB2 Cluster: CG7168-PA; n=2; Sophophora|Rep: CG7168-PA
- Drosophila melanogaster (Fruit fly)
Length = 233
Score = 67.7 bits (158), Expect = 3e-10
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 7/225 (3%)
Frame = -3
Query: 682 QKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEK---LKVPLATIRNLVQAL 512
Q++HL LL + + V ++ CK A +Y+ G N ++Y + A+K L P A ++ V+AL
Sbjct: 10 QRNHLSLLQKPASAV-VELCKSAFDYLINGPNPSRYEMLAKKSSDLGSPEA-VQQAVEAL 67
Query: 511 VYLILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKL--YNTKKKELYE-ALQLLQRNDP 341
+ L++ + S S ++ F DV+ L + T K+ E +++
Sbjct: 68 ISLLISVTTRVGSSSVDMEAILRQTFPELGDDVIEVLEQFVTSKRNFVEGSIKSANIRAY 127
Query: 340 KYIDFAWRFEVQIASRNSNEGIKPVVTMDFVTMRPKSFALHEKETIINRKQKATNYIVDA 161
+ ++ WR EV+ ASR+ + + VVTM LH + NR+ A + I
Sbjct: 128 RLVNLDWRLEVRTASRSLLDQCQVVVTMKLY--------LHTEPKNENRELLAVD-ISGR 178
Query: 160 TVQEAKAAIQCQN-NVNHTLLQCDIPNLIHLTNKLDQALKESKSQ 29
+ QE KA + + + L+Q D+ +L+H+ L+ AL ESK++
Sbjct: 179 SEQELKAMQEDERLHRKDLLVQTDVCSLVHMIKTLEDALAESKTR 223
>UniRef50_Q236D6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 195
Score = 60.5 bits (140), Expect = 4e-08
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Frame = -3
Query: 613 VEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSESDFRSSLALAGF 434
+ YI K + + E L++ + + L+ L+ +K N E +F++ L +
Sbjct: 30 ISYIAKSDTTTRLN---EILEIEEESANQIFPVLLKLVSFFAKFNAGEREFKAHLEMIQL 86
Query: 433 SNDQQDVMSKLYNTKKKELYEALQLLQR-NDPKYIDFAWRFEVQIASRNSNEGIKPVVTM 257
+ D++ + + +K L +AL LL+R N+P+Y + WRF++Q++SR + KP + M
Sbjct: 87 NKDKKLLFLQKMKESEKHLRKALGLLERDNEPEYANLRWRFDLQVSSRTNESETKPKILM 146
Query: 256 DFVTMRPKSFALHEKETIINRKQKATNYIVDA 161
+ H ET + + T + A
Sbjct: 147 QLDLLNNGKIEGHILETDLANLKHLTEELTQA 178
>UniRef50_UPI0000E48DF6 Cluster: PREDICTED: similar to COMM domain
containing 3; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to COMM domain containing 3 -
Strongylocentrotus purpuratus
Length = 193
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Frame = -3
Query: 541 ATIRNLVQALVYLILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQ 362
A ++ +L L+LE +KH+ S S L FS D+ D K + KK+E+ L
Sbjct: 55 AVLKESYASLYTLVLEAAKHDADNSSISSFLEDNKFSQDRIDAFLKHFQEKKQEIRSMLS 114
Query: 361 LLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVTMDFVTMRPKSFALH-EKETIINRKQK 185
+ P +D WR + + +++ ++ +P ++ T + A + + + Q
Sbjct: 115 NIGHTPPHIVDVDWRLDFYLKNKHIDKINQPTYLINLKTEQGHRGAKDIQFSCSLEQLQD 174
Query: 184 ATNYIVDATVQEAKAA 137
+ DAT KAA
Sbjct: 175 LVGKLKDATKSLEKAA 190
>UniRef50_A0BQL3 Cluster: Chromosome undetermined scaffold_120,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_120,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 202
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = -3
Query: 652 HSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLS 473
+S + +I+F A+ YI K AE L++ + + L+ K
Sbjct: 20 NSYEKIINF---AISYIVKHDTQTTL---AEVLEIDENEADRYFRLALKLVSYFGKFKFG 73
Query: 472 ESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRND-PKYIDFAWRFEVQIAS 296
+ FR ++ F D++ + + +L++ L ++ + P Y + WR+++QIAS
Sbjct: 74 DRQFRQNVEFLKFKEDRKALFLQKLEANSTQLHKRLSFIESDGMPYYKNLEWRYDIQIAS 133
Query: 295 RNSNEGIKPVVTMDF 251
R E KP + M F
Sbjct: 134 RGYEEEFKPRIFMKF 148
>UniRef50_UPI00015B5160 Cluster: PREDICTED: similar to BUP; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to BUP -
Nasonia vitripennis
Length = 190
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = -3
Query: 535 IRNLVQALVYLILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLL 356
+++ + L++E ++H+ S + S L S D K Y K++L E+L+ +
Sbjct: 56 VKSAYADITKLLIETARHDTSSEELSSLLRCTTLSKTYIDRFCKFYGNHKEQLQESLESI 115
Query: 355 QRNDPKYIDFAWRFEVQI-ASRNSNEGIKPVVTMDFVTMR 239
+ P ID WR + I +S NS G+ P+ + T++
Sbjct: 116 GNSLPHIIDVDWRLDYCIKSSINSPAGV-PIYNVSLSTIK 154
>UniRef50_Q54DR0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 187
Score = 39.9 bits (89), Expect = 0.068
Identities = 25/111 (22%), Positives = 52/111 (46%)
Frame = -3
Query: 598 KGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSESDFRSSLALAGFSNDQQ 419
K + K + +E+ V L I +I + S ++ S F + + + F+ QQ
Sbjct: 26 KSLETLKEMVFSEQDDVTLELIEFTYNKCFEIIQKASYSDMQISTFENIVKESDFTTVQQ 85
Query: 418 DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPV 266
+ ++K + KK+++E + R + +WR +V+ S+ +E +PV
Sbjct: 86 ECLNKFWKVNKKKIHEIIYKTTRFNNSLQKISWRIDVKTKSKEISEINEPV 136
>UniRef50_Q6LGW6 Cluster: Hypothetical conjugal transfer protein
TrbF; n=1; Photobacterium profundum|Rep: Hypothetical
conjugal transfer protein TrbF - Photobacterium
profundum (Photobacterium sp. (strain SS9))
Length = 222
Score = 38.7 bits (86), Expect = 0.16
Identities = 22/92 (23%), Positives = 44/92 (47%)
Frame = -3
Query: 448 ALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKP 269
AL GF + ++VM + + +K + +A ++Q + P Y+ F+ Q + +
Sbjct: 94 ALTGFIENMRNVMVDV-SAQKSAIIKAYAMMQNDSPAYLQANAHFKQQSPFARAETELVK 152
Query: 268 VVTMDFVTMRPKSFALHEKETIINRKQKATNY 173
V + + + P ++ KET+ R KAT +
Sbjct: 153 VEVITVLPLSPDTYQAEWKETVTARSGKATYF 184
>UniRef50_UPI0000DA40E1 Cluster: PREDICTED: similar to COMM
domain-containing protein 3 (Bup protein) (PIL protein);
n=1; Rattus norvegicus|Rep: PREDICTED: similar to COMM
domain-containing protein 3 (Bup protein) (PIL protein)
- Rattus norvegicus
Length = 295
Score = 37.9 bits (84), Expect = 0.27
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = -3
Query: 502 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 323
ILE KH + +S + L F ++ ++ Y K L L + R P D +
Sbjct: 170 ILEAGKHRVDKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRALPHITDVS 229
Query: 322 WRFEVQIASRNSNEGIKP--VVTMDFVTMRPKSF 227
WR E QI + ++ +P +VT++ +S+
Sbjct: 230 WRLEYQIKTNQLHKMCRPGYLVTLNVENADSQSY 263
>UniRef50_Q86IW8 Cluster: Similar to Mus musculus (Mouse). RIKEN
cDNA 2310065H03 gene; n=2; Dictyostelium discoideum|Rep:
Similar to Mus musculus (Mouse). RIKEN cDNA 2310065H03
gene - Dictyostelium discoideum (Slime mold)
Length = 205
Score = 37.5 bits (83), Expect = 0.36
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Frame = -3
Query: 679 KDHLKLLHEHSVQVLIDFCKLAVE-YINKGANS--NKYGIAAEKLKVPLATIRNLVQALV 509
KD L LL + +I+ K E +N+ S +K +++ KV + L
Sbjct: 14 KDILSLLVLYMKTKMINLVKKEEEDKLNQITESIHDKLTVSSNDNKVDPNLSSIVFTGLY 73
Query: 508 YLILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYID 329
Y++ K +S F + + + ++ +YNT+ K+L E + P+
Sbjct: 74 YILKVALKKKVSNQIFVADITDLKLPQNLITDLTNIYNTQSKDLAERSNNDKILFPQLSS 133
Query: 328 FAWRFEVQIASRNSNEGIKPVVTMDFVTMRPKS 230
F WR +V I+S ++ + PV+ M+ KS
Sbjct: 134 FKWRVDVIISSSFTSRVLNPVILMEMNDTNGKS 166
>UniRef50_Q9UBI1 Cluster: COMM domain-containing protein 3; n=23;
Euteleostomi|Rep: COMM domain-containing protein 3 -
Homo sapiens (Human)
Length = 195
Score = 37.5 bits (83), Expect = 0.36
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = -3
Query: 502 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 323
ILE KH +S + L F ++ ++ Y K L L + R+ P D +
Sbjct: 70 ILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVS 129
Query: 322 WRFEVQIASRNSNEGIKP 269
WR E QI + + +P
Sbjct: 130 WRLEYQIKTNQLHRMYRP 147
>UniRef50_Q8IHU4 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2738
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 241 RPKSFALHEKETIINRKQKATNYIVDATVQEAKAAIQCQNNVNHTLLQCDIPNLIHLTN 65
+ K L+E + I +K+K TNYI +++ NN+N T + N H+ N
Sbjct: 1416 KAKQMLLNEVDRIKEKKKKETNYIYPQIIEDININKNNNNNINQTNTKSTDTNFKHMNN 1474
>UniRef50_Q9CQ02 Cluster: COMM domain-containing protein 4; n=20;
Eumetazoa|Rep: COMM domain-containing protein 4 - Mus
musculus (Mouse)
Length = 199
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/129 (17%), Positives = 51/129 (39%)
Frame = -3
Query: 649 SVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSE 470
SV++ + ++ E + +G + K K ++ V L +++ +KH++
Sbjct: 27 SVKLRLLCSQVLKELLGQGIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDS 86
Query: 469 SDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRN 290
S L G + + + Y K+ L E L+ + WR + ++S
Sbjct: 87 DSLSSELQQLGLPKEHATSLCRCYEEKQSPLQEHLRACSLRVNRLASVGWRVDYTLSSSL 146
Query: 289 SNEGIKPVV 263
+ +P+V
Sbjct: 147 LHSVEEPMV 155
>UniRef50_Q5E5K1 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 691
Score = 34.7 bits (76), Expect = 2.5
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = -3
Query: 535 IRNLVQALVYLILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLL 356
I N +AL+YL LS+ +++ AL+ F+ + L+ T+ EL E L
Sbjct: 139 IGNFNEALIYLTQAAEL--LSQHGPKTAAALSYFNIAEIKAKQFLF-TEANELLENLYQD 195
Query: 355 QRNDPKYIDFAWRFEVQIASRN 290
+N+P+Y+ F ++ + +IAS +
Sbjct: 196 IKNEPRYLGFYYKIKAEIASHS 217
>UniRef50_Q14QD2 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 719
Score = 34.7 bits (76), Expect = 2.5
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Frame = -3
Query: 598 KGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSE---SDFRSSL--ALAGF 434
K + K G K K LAT L AL + + +++ L + S +++ A+
Sbjct: 456 KYKEATKIGQCGLKTKYKLATFIALGSALDHFVQVKNEYLLKKQKISFLKNNYYQAVWKV 515
Query: 433 SNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVTM- 257
+ +S+ YN KKELY L LQ +Y+D E I + E PV
Sbjct: 516 KGQAKQELSQFYNLPKKELYAKLAHLQ---SQYVDLVLNQEEAI--KKLRESYYPVFNQI 570
Query: 256 ------DFVTMRPK----SFALHEKETIINRKQKATNYIVDATVQEAKAAIQCQNNVNHT 107
DF T++ K + L+++ + R+Q+ Y T ++K I+ + V +
Sbjct: 571 QQKYLNDFKTLQKKEAMITKKLNQEIKALKRQQRHEMYQFRITNYQSKKKIKRELRVINC 630
Query: 106 LLQCDI---PNLIHLTNKLDQALKESKSQXCTVKYQ 8
++ D+ + L L LKE K Q ++YQ
Sbjct: 631 QIKGDVRVQQEVALLKQNLKLQLKEMKQQF-NIEYQ 665
>UniRef50_Q1NR95 Cluster: Flagellin-like:transferase hexapeptide
repeat:Flagellin hook IN; n=2; delta proteobacterium
MLMS-1|Rep: Flagellin-like:transferase hexapeptide
repeat:Flagellin hook IN - delta proteobacterium MLMS-1
Length = 1327
Score = 34.3 bits (75), Expect = 3.4
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -3
Query: 301 ASRNSNEGIKPVVTMDFVTMRPKSFALHEKETIINR-KQKATNYIVDATVQEAKAAIQCQ 125
A RN+N+GI V T D AL E IIN K KA D QE++AAIQ
Sbjct: 81 AIRNANDGISMVQTAD--------GALEESINIINTVKTKAIQAAQDGQTQESRAAIQA- 131
Query: 124 NNVNHTLLQCDIPNLIHLTNKLDQAL 47
++N L Q D N+ T+ +Q L
Sbjct: 132 -DINKLLEQLD--NIAKTTSFNNQKL 154
>UniRef50_Q6BRI4 Cluster: Similar to CA5674|IPF1274 Candida albicans
IPF1274; n=1; Debaryomyces hansenii|Rep: Similar to
CA5674|IPF1274 Candida albicans IPF1274 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1026
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = -3
Query: 430 NDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNS--NEGIKPVVTM 257
ND+ D M + N + +E + +L N+ + I+ ++++ + S N+G + T+
Sbjct: 435 NDRNDQMKAIIN----KCFEHINILNLNEEQVINIQKQYDITDSKNGSAGNDGYFDIETL 490
Query: 256 DFVTMRPKSFALHE 215
F+ PK F L++
Sbjct: 491 RFIQTNPKEFGLND 504
>UniRef50_Q6L0T2 Cluster: Hypothetical archaea-specific FeS
oxidoreductase; n=4; Thermoplasmatales|Rep: Hypothetical
archaea-specific FeS oxidoreductase - Picrophilus
torridus
Length = 352
Score = 34.3 bits (75), Expect = 3.4
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -3
Query: 604 INKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGS--KHNLSESDFRSSL-ALAGF 434
+NKG N NK+ AA+ L+ N ++ YLIL+ ++ SD SS+ A+AG+
Sbjct: 171 VNKGTNFNKFLSAAKLLRA------NNLELRTYLILKPPFISEKMAISDVISSVRAVAGY 224
Query: 433 SNDQQDVMSKLYNTKKKELYEAL 365
SN DV N +K + EAL
Sbjct: 225 SN---DVSINPMNIQKNTMVEAL 244
>UniRef50_Q1NT76 Cluster: Flagellin-like:transferase hexapeptide
repeat; n=1; delta proteobacterium MLMS-1|Rep:
Flagellin-like:transferase hexapeptide repeat - delta
proteobacterium MLMS-1
Length = 1207
Score = 33.9 bits (74), Expect = 4.4
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 301 ASRNSNEGIKPVVTMDFVTMRPKSFALHEKETIINR-KQKATNYIVDATVQEAKAAIQCQ 125
A RN+N+GI V T D AL E IIN K KA D QE++ AIQ
Sbjct: 64 AIRNANDGISIVQTAD--------GALEESSNIINEIKTKAIQAAQDGQTQESRGAIQA- 114
Query: 124 NNVNHTLLQCD 92
++N L Q D
Sbjct: 115 -DINRLLEQLD 124
>UniRef50_Q22DX5 Cluster: Chitin binding Peritrophin-A domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Chitin binding Peritrophin-A domain
containing protein - Tetrahymena thermophila SB210
Length = 459
Score = 33.5 bits (73), Expect = 5.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 652 HSVQVLIDFCKLAVEYINKGANSNKYGIAAEKL 554
H V I K++V YIN+ NSN YGI++ K+
Sbjct: 252 HVVNNKISNNKISVPYINRNYNSNNYGISSNKI 284
>UniRef50_A2DKR9 Cluster: K14 protein, putative; n=1; Trichomonas
vaginalis G3|Rep: K14 protein, putative - Trichomonas
vaginalis G3
Length = 860
Score = 33.5 bits (73), Expect = 5.9
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -3
Query: 604 INKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSESDFRSSLALAGFSND 425
I N+NK GI + A + V+ + YL+ EG N D RS L +A +ND
Sbjct: 92 ITTAKNTNKPGITGTYKPIHYAVLGGSVECVYYLLNEGIDLNEVIKDTRSPLYIAIVNND 151
Query: 424 QQDVMSKLYN 395
+ V + + N
Sbjct: 152 LEMVETLIDN 161
>UniRef50_A6NDZ9 Cluster: Uncharacterized protein ENSP00000269230;
n=4; Euarchontoglires|Rep: Uncharacterized protein
ENSP00000269230 - Homo sapiens (Human)
Length = 1042
Score = 33.5 bits (73), Expect = 5.9
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 183 AFCFLFIMVSFSCKAKLLGLIVTKSIVTTGFIPSFEFLEAIC-TSNLQAKSIYFGSLRCN 359
A L + FS A+ LGL+++ +P E L+ IC T ++ +K+I C
Sbjct: 305 AHVLLQLRQRFSGLARCLGLMLSSEFGAPVSVPVQEILDFICRTLSVSSKNISLHGDPCG 364
Query: 360 SCKASYSSFFFVLYNLLITSC 422
C S+ L + LI +C
Sbjct: 365 CCCCPLSTLALDLLSALILAC 385
>UniRef50_Q8ZZS3 Cluster: Putative uncharacterized protein PAE0109;
n=1; Pyrobaculum aerophilum|Rep: Putative
uncharacterized protein PAE0109 - Pyrobaculum aerophilum
Length = 790
Score = 33.5 bits (73), Expect = 5.9
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = -3
Query: 454 SLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIA---SRNSN 284
SL L G ++ D ++ + TK E+ A L ++N A + + +A +R
Sbjct: 672 SLVLLGGDREKLDKAARYFYTKLMEIRRAADLCEKNPLAARKTAAKALIDLAYFVNRRGG 731
Query: 283 EGIKPVVTMDFVTMRPKSFA 224
EG++ V+ + +RP+ FA
Sbjct: 732 EGLEKVIELAGALVRPEQFA 751
>UniRef50_UPI0000F1ED97 Cluster: PREDICTED: similar to putative TRP
cation channel; n=2; Danio rerio|Rep: PREDICTED: similar
to putative TRP cation channel - Danio rerio
Length = 1378
Score = 33.1 bits (72), Expect = 7.8
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 173 IICSLLFS-IYNGFLLM*GKALRSHCNKIHCHHWFYSFI*IPRSNLHFKPPSKIYIFWII 349
++C + F IY GFL K L++ N ++C SF+ P+ ++ S W+
Sbjct: 711 LLCMIFFPLIYTGFLTFRSKLLKAFGNPLNCSSRLMSFLKSPQVKFYWNIASYFGFLWLF 770
Query: 350 TL 355
+
Sbjct: 771 AV 772
>UniRef50_UPI0000499CE6 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 664
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 253 FVTMRPKSFALHEKETIINRKQKATNYIVDAT-VQEAKAAIQCQNNVNHTLLQCDIPNLI 77
++T K +H + N+KQK Y++ A V K I+ ++ H L+Q ++PNLI
Sbjct: 606 YLTTTQKIVHIHPSSCVHNKKQK---YVLFAELVYTTKPFIRSVLSLEHELVQEEMPNLI 662
Query: 76 H 74
H
Sbjct: 663 H 663
>UniRef50_Q2AED1 Cluster: Fimbrial assembly; n=1; Halothermothrix
orenii H 168|Rep: Fimbrial assembly - Halothermothrix
orenii H 168
Length = 172
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = -3
Query: 481 NLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQI 302
NLSE + + + G + D++++M + N KK EL+E +QLL K D +++ + +
Sbjct: 113 NLSEDN---KINIIGIARDEKELMVFVNNLKKSELFEMVQLLTVR--KSQDLSFQIKAGV 167
Query: 301 ASR 293
A R
Sbjct: 168 AER 170
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,123,211
Number of Sequences: 1657284
Number of extensions: 13576939
Number of successful extensions: 38596
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 36979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38578
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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