Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc17a08
(791 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 433 e-121
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 433 e-121
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 433 e-121
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 433 e-121
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 433 e-121
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 220 2e-57
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 220 2e-57
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 92 9e-19
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 92 9e-19
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 61 1e-09
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 46 4e-05
X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine deca... 30 3.2
AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA... 30 3.2
AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein... 29 9.6
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 433 bits (1066), Expect = e-121
Identities = 190/215 (88%), Positives = 206/215 (95%)
Frame = -1
Query: 791 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAE 612
L+EKY+YDVTEARKIWCFGP+GTGPN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+
Sbjct: 621 LSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILAD 680
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEV
Sbjct: 681 ENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEV 740
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
AVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVF
Sbjct: 741 AVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 800
Query: 251 DHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 147
DHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 801 DHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p protein.
Length = 844
Score = 433 bits (1066), Expect = e-121
Identities = 190/215 (88%), Positives = 206/215 (95%)
Frame = -1
Query: 791 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAE 612
L+EKY+YDVTEARKIWCFGP+GTGPN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+
Sbjct: 621 LSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILAD 680
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEV
Sbjct: 681 ENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEV 740
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
AVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVF
Sbjct: 741 AVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 800
Query: 251 DHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 147
DHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 801 DHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 433 bits (1066), Expect = e-121
Identities = 190/215 (88%), Positives = 206/215 (95%)
Frame = -1
Query: 791 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAE 612
L+EKY+YDVTEARKIWCFGP+GTGPN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+
Sbjct: 609 LSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILAD 668
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEV
Sbjct: 669 ENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEV 728
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
AVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVF
Sbjct: 729 AVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 788
Query: 251 DHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 147
DHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 789 DHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 433 bits (1066), Expect = e-121
Identities = 190/215 (88%), Positives = 206/215 (95%)
Frame = -1
Query: 791 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAE 612
L+EKY+YDVTEARKIWCFGP+GTGPN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+
Sbjct: 609 LSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILAD 668
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEV
Sbjct: 669 ENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEV 728
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
AVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVF
Sbjct: 729 AVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 788
Query: 251 DHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 147
DHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 789 DHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 433 bits (1066), Expect = e-121
Identities = 190/215 (88%), Positives = 206/215 (95%)
Frame = -1
Query: 791 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAE 612
L+EKY+YDVTEARKIWCFGP+GTGPN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+
Sbjct: 621 LSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILAD 680
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEV
Sbjct: 681 ENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEV 740
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
AVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVF
Sbjct: 741 AVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 800
Query: 251 DHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 147
DHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 801 DHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p protein.
Length = 975
Score = 220 bits (538), Expect = 2e-57
Identities = 107/224 (47%), Positives = 144/224 (64%), Gaps = 16/224 (7%)
Frame = -1
Query: 779 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAE 612
Y++D+ AR IW FGP+ TGPNILVD + + L +KDS+V GFQW +EG + E
Sbjct: 725 YDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCE 784
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
E +R V+F I D + +A+HRGGGQIIPT RR Y+ L A PRLMEP E+Q P
Sbjct: 785 EPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPAD 844
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
V +Y VL RRRGHV +++ V+G+P++ +KA++P +SFGF DLR++T GQAF VF
Sbjct: 845 CVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVF 904
Query: 251 DHWQVLPGD---------PCEPQSKPY---NVVQETRKRKGLKE 156
HWQ++PGD P EPQ + + +TR+RKGL E
Sbjct: 905 HHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSE 948
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 220 bits (538), Expect = 2e-57
Identities = 107/224 (47%), Positives = 144/224 (64%), Gaps = 16/224 (7%)
Frame = -1
Query: 779 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAE 612
Y++D+ AR IW FGP+ TGPNILVD + + L +KDS+V GFQW +EG + E
Sbjct: 725 YDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCE 784
Query: 611 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 432
E +R V+F I D + +A+HRGGGQIIPT RR Y+ L A PRLMEP E+Q P
Sbjct: 785 EPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPAD 844
Query: 431 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 252
V +Y VL RRRGHV +++ V+G+P++ +KA++P +SFGF DLR++T GQAF VF
Sbjct: 845 CVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVF 904
Query: 251 DHWQVLPGD---------PCEPQSKPY---NVVQETRKRKGLKE 156
HWQ++PGD P EPQ + + +TR+RKGL E
Sbjct: 905 HHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSE 948
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p protein.
Length = 949
Score = 91.9 bits (218), Expect = 9e-19
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Frame = -1
Query: 752 KIWCFGPEGTGPNILVDCSKGVQ-------------------YLNEIKDSVVAGFQWAAK 630
+IW GP G NIL++ S Q + S+V GFQ +
Sbjct: 693 RIWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPRKDFNSSLVNGFQITSV 752
Query: 629 EGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRCLYACLLTAQPRLMEP 465
G + EE ++GV F + + ++ + D RG GQ++ + RL+ P
Sbjct: 753 AGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQAFQNQPQRLVTP 812
Query: 464 VYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSN 285
+Y C I +G +Y V+ RR G + G+ F V LPV ESF F ++R
Sbjct: 813 MYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQ 872
Query: 284 TGGQAFPQCVFDHWQVLPGDP 222
T G A PQ +F HW+V+ DP
Sbjct: 873 TSGLACPQLMFSHWEVIDIDP 893
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 91.9 bits (218), Expect = 9e-19
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Frame = -1
Query: 752 KIWCFGPEGTGPNILVDCSKGVQ-------------------YLNEIKDSVVAGFQWAAK 630
+IW GP G NIL++ S Q + S+V GFQ +
Sbjct: 777 RIWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPRKDFNSSLVNGFQITSV 836
Query: 629 EGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRCLYACLLTAQPRLMEP 465
G + EE ++GV F + + ++ + D RG GQ++ + RL+ P
Sbjct: 837 AGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQAFQNQPQRLVTP 896
Query: 464 VYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSN 285
+Y C I +G +Y V+ RR G + G+ F V LPV ESF F ++R
Sbjct: 897 MYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQ 956
Query: 284 TGGQAFPQCVFDHWQVLPGDP 222
T G A PQ +F HW+V+ DP
Sbjct: 957 TSGLACPQLMFSHWEVIDIDP 977
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 61.3 bits (142), Expect = 1e-09
Identities = 43/184 (23%), Positives = 83/184 (45%)
Frame = -1
Query: 707 VDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQII 528
VD + G + V G++ A++G+++ L G+RF + D H + +
Sbjct: 564 VDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQDGGHHI--VDSSELAFM 621
Query: 527 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMF 348
+ +++EP+ L E+ PE G + G L++R G + G F
Sbjct: 622 LAAHGAIKEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--WF 679
Query: 347 IVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 168
V A +P+N+ FG+ +LRS+T G+ + + PC P + +V++ ++ +
Sbjct: 680 TVYAEVPLNDMFGYAGELRSSTQGKGEFTMEYSRY-----SPCLPDVQD-QIVRQYQESQ 733
Query: 167 GLKE 156
GL +
Sbjct: 734 GLAQ 737
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 46.4 bits (105), Expect = 4e-05
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = -1
Query: 575 VTLHTDAIHRGGGQ--IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLN 402
+ LH I RG ++ T +C+ L T+ RL+EP+ +I P + GI L+
Sbjct: 562 IRLHNATIGRGTADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLS 621
Query: 401 RRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 270
RRR + + G ++ P+ E G+++ LR+ + G A
Sbjct: 622 RRRA-LINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTA 664
>X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine
decarboxylase protein.
Length = 847
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -1
Query: 650 GFQWAAKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 483
GF WA+ E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 482 PRLME 468
R ++
Sbjct: 162 TRAIQ 166
>AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA
protein.
Length = 847
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -1
Query: 650 GFQWAAKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 483
GF WA+ E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 482 PRLME 468
R ++
Sbjct: 162 TRAIQ 166
>AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein
protein.
Length = 539
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 270 GLSAGVGTQIGSKTERLIDR*VGLHNEHRCTCH 368
G +AG+G +IGS T + D GL+NEH + H
Sbjct: 193 GGAAGMGLRIGSNTNNM-DMQQGLYNEHFISEH 224
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,673,343
Number of Sequences: 53049
Number of extensions: 939523
Number of successful extensions: 2494
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -