Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc17a02
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    95   2e-21
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.72 
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    25   2.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.9  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    24   5.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.9  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 95.1 bits (226), Expect = 2e-21
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
 Frame = -1

Query: 835 VVGSKKNVGLIQXNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 656
           VV  + N+ LI  NRPK  NA+      +L  A+ +F+ D      ++ G   +F +G D
Sbjct: 48  VVEKENNITLIGINRPKVRNAIDSITGRKLSAAIAEFENDPKADVGVLHGIGGSFCSGYD 107

Query: 655 IKEMQNNTYSSNTKQGFLREWEDISN-----CGKPIIAAVNGFALGGGCELAMLCDIIYA 491
           + E+             +   E +         KP++ A+ G+ + GG ELA++CD+   
Sbjct: 108 LSELAGQQEPQQALS-IVHHPEGVMGPTRRMIRKPLVCAITGYCVAGGLELALMCDLRVM 166

Query: 490 GEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFP 311
            E A  G      G     GGT RLP  +G S+A++++LTG    A EA  +GLV++V  
Sbjct: 167 EENAVLGFFNRRFGVPLIDGGTVRLPALIGLSRALDLILTGRTVTAKEALDIGLVNRVVA 226

Query: 310 VEKLLEETIKLAERIGTHSPLIVKLAKQA 224
           V   L +   LA  I  +  L ++  + A
Sbjct: 227 VGAGLGQAYNLAMSIAKYPQLCIRHDRDA 255


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 426 VPPAPGMVPMLISG*PNFAFSPA*MISHSIASSQPPPRAKPLTAAMMGFPQL 581
           +PP PGM+P +  G P     P   +   +   +PPP   P     MG P +
Sbjct: 85  MPPRPGMIPGM-PGAPPLLMGPNGPLPPPMMGMRPPPMMVP----TMGMPPM 131


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 154 RFHRRWTS--QTASPI*GWSRKLGSQLVWPTSQLTGSGFRS 270
           R  R WT+  +T +P  G    L   + WPT   TG+G+ S
Sbjct: 500 RVVRMWTNFAKTGNPTPGQDALL-QNVQWPTVGATGTGYLS 539


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 530  TPKSETINSGNDGLPTVGDVLPF 598
            TP SET+  G    PTV  ++ F
Sbjct: 967  TPTSETVGGGMHRTPTVASMMTF 989


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -1

Query: 403 GKSKAM--EIVLTGNFFDAHEAEKMGLVSKV 317
           GK KAM   IV  GN  D H AEK   V ++
Sbjct: 141 GKLKAMFHTIVDVGNRLDQHLAEKCQQVKRI 171


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 463  RADRISPFRRHR*YRTALPAHNHPQER 543
            R+  +SP R  R Y T      H  ER
Sbjct: 1041 RSQTLSPVRNERNYHTLTTTRTHSTER 1067


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 983,068
Number of Sequences: 2352
Number of extensions: 22902
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)