Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16p18
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 35 0.37
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 35 0.37
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 35 0.37
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 35 0.37
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 35 0.37
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 35 0.37
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 35 0.37
U40370-1|AAC50436.1| 535|Homo sapiens 3',5' cyclic nucleotide p... 31 3.4
BC022480-1|AAH22480.1| 545|Homo sapiens phosphodiesterase 1A, c... 31 3.4
AL110263-1|CAB53703.1| 519|Homo sapiens hypothetical protein pr... 31 3.4
AJ401610-1|CAC82208.1| 519|Homo sapiens 3'5' cyclic nucleotide ... 31 3.4
AB038224-9|BAB20054.1| 518|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-8|BAB20053.1| 501|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-7|BAB20057.1| 511|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-6|BAB20052.1| 552|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-5|BAB20050.1| 535|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-4|BAB20056.1| 545|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-3|BAB20051.1| 536|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-2|BAB20049.1| 519|Homo sapiens calmodulin-dependent ph... 31 3.4
AB038224-1|BAB20055.1| 529|Homo sapiens calmodulin-dependent ph... 31 3.4
BC093895-1|AAH93895.1| 184|Homo sapiens MSFL2541 protein. 30 7.9
BC093893-1|AAH93893.1| 184|Homo sapiens MSFL2541 protein. 30 7.9
BC035124-1|AAH35124.1| 143|Homo sapiens UNQ2541 protein protein. 30 7.9
AY358618-1|AAQ88981.1| 184|Homo sapiens MSFL2541 protein. 30 7.9
AL355987-2|CAM14252.1| 184|Homo sapiens novel protein (MSFL2541... 30 7.9
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 39/181 (21%), Positives = 79/181 (43%)
Frame = -2
Query: 687 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 508
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 507 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 328
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 327 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDD 148
Y+ +AL+ C + A++L+R L + L++ L +D+ + +
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVN 184
Query: 147 C 145
C
Sbjct: 185 C 185
>U40370-1|AAC50436.1| 535|Homo sapiens 3',5' cyclic nucleotide
phosphodiesterase protein.
Length = 535
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 219 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 274
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 275 RSDVAILYNDRSVLENHHVSAAYRLMQ 301
>BC022480-1|AAH22480.1| 545|Homo sapiens phosphodiesterase 1A,
calmodulin-dependent protein.
Length = 545
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 219 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 274
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 275 RSDVAILYNDRSVLENHHVSAAYRLMQ 301
>AL110263-1|CAB53703.1| 519|Homo sapiens hypothetical protein
protein.
Length = 519
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 203 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 258
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 259 RSDVAILYNDRSVLENHHVSAAYRLMQ 285
>AJ401610-1|CAC82208.1| 519|Homo sapiens 3'5' cyclic nucleotide
phosphodiesterase 1A5 protein.
Length = 519
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 203 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 258
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 259 RSDVAILYNDRSVLENHHVSAAYRLMQ 285
>AB038224-9|BAB20054.1| 518|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 518
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 185 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 240
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 241 RSDVAILYNDRSVLENHHVSAAYRLMQ 267
>AB038224-8|BAB20053.1| 501|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 501
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 185 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 240
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 241 RSDVAILYNDRSVLENHHVSAAYRLMQ 267
>AB038224-7|BAB20057.1| 511|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 511
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 185 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 240
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 241 RSDVAILYNDRSVLENHHVSAAYRLMQ 267
>AB038224-6|BAB20052.1| 552|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 552
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 219 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 274
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 275 RSDVAILYNDRSVLENHHVSAAYRLMQ 301
>AB038224-5|BAB20050.1| 535|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 535
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 219 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 274
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 275 RSDVAILYNDRSVLENHHVSAAYRLMQ 301
>AB038224-4|BAB20056.1| 545|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 545
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 219 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 274
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 275 RSDVAILYNDRSVLENHHVSAAYRLMQ 301
>AB038224-3|BAB20051.1| 536|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 536
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 203 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 258
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 259 RSDVAILYNDRSVLENHHVSAAYRLMQ 285
>AB038224-2|BAB20049.1| 519|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 519
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 203 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 258
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 259 RSDVAILYNDRSVLENHHVSAAYRLMQ 285
>AB038224-1|BAB20055.1| 529|Homo sapiens calmodulin-dependent
phosphodiesterase protein.
Length = 529
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +1
Query: 37 HNLMTEDFVTDRWSYQFLALGIQHQGSEVRVWGFHGAVVVRDREHIVDVHFESWQFVSQV 216
HNL+ VT Y L GI H +E+ + A + D EH + F Q
Sbjct: 203 HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTN----NFHIQT 258
Query: 217 RHHVLLQFGCPGQNECSEVTSAFRLLR 297
R V + + E V++A+RL++
Sbjct: 259 RSDVAILYNDRSVLENHHVSAAYRLMQ 285
>BC093895-1|AAH93895.1| 184|Homo sapiens MSFL2541 protein.
Length = 184
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -2
Query: 360 GIYNTYVIDTEYKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVD 181
G + ++DT+Y ++A+L + ++ EGA + SRT + + +D P +
Sbjct: 105 GYLDVRIVDTDYSSFAVL-YIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLP 163
Query: 180 INYVFAIPHDD 148
+ + +P D
Sbjct: 164 KDMMVMLPQSD 174
>BC093893-1|AAH93893.1| 184|Homo sapiens MSFL2541 protein.
Length = 184
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -2
Query: 360 GIYNTYVIDTEYKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVD 181
G + ++DT+Y ++A+L + ++ EGA + SRT + + +D P +
Sbjct: 105 GYLDVRIVDTDYSSFAVL-YIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLP 163
Query: 180 INYVFAIPHDD 148
+ + +P D
Sbjct: 164 KDMMVMLPQSD 174
>BC035124-1|AAH35124.1| 143|Homo sapiens UNQ2541 protein protein.
Length = 143
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -2
Query: 360 GIYNTYVIDTEYKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVD 181
G + ++DT+Y ++A+L + ++ EGA + SRT + + +D P +
Sbjct: 64 GYLDVRIVDTDYSSFAVL-YIYKELEGALSTMVQLYSRTQDVSPQALKAFQDFYPTLGLP 122
Query: 180 INYVFAIPHDD 148
+ + +P D
Sbjct: 123 EDMMVMLPQSD 133
>AY358618-1|AAQ88981.1| 184|Homo sapiens MSFL2541 protein.
Length = 184
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -2
Query: 360 GIYNTYVIDTEYKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVD 181
G + ++DT+Y ++A+L + ++ EGA + SRT + + +D P +
Sbjct: 105 GYLDVRIVDTDYSSFAVL-YIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLP 163
Query: 180 INYVFAIPHDD 148
+ + +P D
Sbjct: 164 KDMMVMLPQSD 174
>AL355987-2|CAM14252.1| 184|Homo sapiens novel protein (MSFL2541)
protein.
Length = 184
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -2
Query: 360 GIYNTYVIDTEYKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVD 181
G + ++DT+Y ++A+L + ++ EGA + SRT + + +D P +
Sbjct: 105 GYLDVRIVDTDYSSFAVL-YIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLP 163
Query: 180 INYVFAIPHDD 148
+ + +P D
Sbjct: 164 KDMMVMLPQSD 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,015,411
Number of Sequences: 237096
Number of extensions: 2875771
Number of successful extensions: 11000
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11000
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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