Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16p18
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 27 0.15
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 27 0.15
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 27 0.15
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 25 0.77
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 24 1.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 24 1.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 24 1.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 24 1.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 24 1.8
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 24 1.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 24 1.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 1.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 1.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 1.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 1.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 1.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 1.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 1.8
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 4.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.2
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 7.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.5
AY078399-1|AAL83702.1| 31|Apis mellifera major royal jelly pro... 21 9.5
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 9.5
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 27.5 bits (58), Expect = 0.15
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 511 WYNRVDTRSDHELYVPVRGRPHRRDALWKHYLEDRSEP 398
++N +DT+ ++L PV G R + HY D+S+P
Sbjct: 115 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 151
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 27.5 bits (58), Expect = 0.15
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 511 WYNRVDTRSDHELYVPVRGRPHRRDALWKHYLEDRSEP 398
++N +DT+ ++L PV G R + HY D+S+P
Sbjct: 120 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 156
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 27.5 bits (58), Expect = 0.15
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 511 WYNRVDTRSDHELYVPVRGRPHRRDALWKHYLEDRSEP 398
++N +DT+ ++L PV G R + HY D+S+P
Sbjct: 120 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 156
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 311 YCCTARSRRKALVTSLHSFCPGQ 243
Y C +R R+A V L + CPG+
Sbjct: 390 YACWSRDFRRAFVRILCACCPGR 412
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 133 IPPDMYRLRPPPNPRFGPM 151
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 381 IPPDMYRLRPPPNPRFGPM 399
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 366 IPPDMYRLRPPPNPRFGPM 384
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 162 IPHDDCAVKPP-NPNFGPL 109
IP D ++PP NP FGP+
Sbjct: 382 IPPDMYRLRPPPNPRFGPM 400
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 172 IVDVHFESWQFVSQVRHHVLLQFGCP 249
IVD H S F+ + + L+ GCP
Sbjct: 359 IVDHHTASESFMKHYENEMRLRNGCP 384
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 483 TMNFTYRFADDPIGETLFGN 424
T+NFTY A P G+ FGN
Sbjct: 473 TINFTYSLALSPDGQ--FGN 490
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -1
Query: 340 DRHRI*NLGVTAALRGADGRRSLPHCIRSVQDNQTAEERDGVPARQTAKIRSGH 179
DR ++ N RG DG + ++ + ER+ P+RQT GH
Sbjct: 1889 DRDQLVNRNYGVNARGKDGM--------TTEEMRKLIERNEAPSRQTGSGHGGH 1934
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 704 HNKNTINTKKLHHFHYRE 757
H+ + T+ L H HYR+
Sbjct: 351 HHHHHHQTQSLQHLHYRQ 368
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 237 VWLSWTERMQ*GNERLPSAPRSAAVTPKFYILCLS 341
+W+SW E M+ +E L A S ++ C S
Sbjct: 387 LWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSS 421
>AY078399-1|AAL83702.1| 31|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 31
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 70 RWSYQFLALGIQHQGSEVR 126
RW + LGI QG+ VR
Sbjct: 3 RWLFMVACLGIACQGAIVR 21
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 70 RWSYQFLALGIQHQGSEVR 126
RW + LGI QG+ VR
Sbjct: 3 RWLFMVACLGIACQGAIVR 21
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,336
Number of Sequences: 438
Number of extensions: 5626
Number of successful extensions: 33
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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