Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16p13
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003526-1|AAO39530.1|  190|Drosophila melanogaster RE19605p pro...   101   1e-21
BT001575-1|AAN71330.1|  190|Drosophila melanogaster RE23139p pro...   101   1e-21
AY051983-1|AAK93407.1|  190|Drosophila melanogaster LD45324p pro...   101   1e-21
AE014297-2444|AAO41575.1|  190|Drosophila melanogaster CG7217-PB...   101   1e-21
AE014297-2443|AAF55497.2|  190|Drosophila melanogaster CG7217-PA...   101   1e-21
U70770-1|AAB36703.1|  974|Drosophila melanogaster furrowed protein.    29   5.9  
BT003214-1|AAO24969.1| 1174|Drosophila melanogaster RE10878p pro...    29   5.9  
AE014298-1733|AAF48125.2| 1174|Drosophila melanogaster CG1500-PA...    29   5.9  

>BT003526-1|AAO39530.1|  190|Drosophila melanogaster RE19605p
           protein.
          Length = 190

 Score =  101 bits (242), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = -3

Query: 825 QHNXKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGL 646
           +H   GKVR+LADP+G F KALD+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGL
Sbjct: 120 EHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGL 179

Query: 645 SCSLADKIKVK 613
           SCSLA+ I  K
Sbjct: 180 SCSLANNIGKK 190


>BT001575-1|AAN71330.1|  190|Drosophila melanogaster RE23139p
           protein.
          Length = 190

 Score =  101 bits (242), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = -3

Query: 825 QHNXKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGL 646
           +H   GKVR+LADP+G F KALD+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGL
Sbjct: 120 EHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGL 179

Query: 645 SCSLADKIKVK 613
           SCSLA+ I  K
Sbjct: 180 SCSLANNIGKK 190


>AY051983-1|AAK93407.1|  190|Drosophila melanogaster LD45324p
           protein.
          Length = 190

 Score =  101 bits (242), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = -3

Query: 825 QHNXKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGL 646
           +H   GKVR+LADP+G F KALD+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGL
Sbjct: 120 EHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGL 179

Query: 645 SCSLADKIKVK 613
           SCSLA+ I  K
Sbjct: 180 SCSLANNIGKK 190


>AE014297-2444|AAO41575.1|  190|Drosophila melanogaster CG7217-PB,
           isoform B protein.
          Length = 190

 Score =  101 bits (242), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = -3

Query: 825 QHNXKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGL 646
           +H   GKVR+LADP+G F KALD+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGL
Sbjct: 120 EHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGL 179

Query: 645 SCSLADKIKVK 613
           SCSLA+ I  K
Sbjct: 180 SCSLANNIGKK 190


>AE014297-2443|AAF55497.2|  190|Drosophila melanogaster CG7217-PA,
           isoform A protein.
          Length = 190

 Score =  101 bits (242), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = -3

Query: 825 QHNXKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGL 646
           +H   GKVR+LADP+G F KALD+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGL
Sbjct: 120 EHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGL 179

Query: 645 SCSLADKIKVK 613
           SCSLA+ I  K
Sbjct: 180 SCSLANNIGKK 190


>U70770-1|AAB36703.1|  974|Drosophila melanogaster furrowed protein.
          Length = 974

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +3

Query: 717 WSGN-PRAAADWCPGPKP 767
           WSG  P    DWCP P+P
Sbjct: 281 WSGKQPECLVDWCPDPQP 298


>BT003214-1|AAO24969.1| 1174|Drosophila melanogaster RE10878p
           protein.
          Length = 1174

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +3

Query: 717 WSGN-PRAAADWCPGPKP 767
           WSG  P    DWCP P+P
Sbjct: 513 WSGKQPECLVDWCPDPQP 530


>AE014298-1733|AAF48125.2| 1174|Drosophila melanogaster CG1500-PA
           protein.
          Length = 1174

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +3

Query: 717 WSGN-PRAAADWCPGPKP 767
           WSG  P    DWCP P+P
Sbjct: 513 WSGKQPECLVDWCPDPQP 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,661,445
Number of Sequences: 53049
Number of extensions: 675486
Number of successful extensions: 1470
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)