Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16o09
(759 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein. 35 0.28
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 35 0.37
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 35 0.37
BC031603-1|AAH31603.1| 422|Homo sapiens ALS2CR12 protein protein. 35 0.37
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 35 0.37
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 35 0.37
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 34 0.48
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 34 0.48
AL512506-1|CAI16114.1| 273|Homo sapiens novel protein protein. 33 0.85
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy... 32 2.6
U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open read... 31 3.4
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 31 6.0
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 31 6.0
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 31 6.0
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 31 6.0
AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein FL... 31 6.0
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 31 6.0
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 31 6.0
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 31 6.0
AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens ... 31 6.0
AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4 p... 31 6.0
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 31 6.0
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 31 6.0
AC007256-2|AAY24226.1| 445|Homo sapiens unknown protein. 31 6.0
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 31 6.0
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 31 6.0
AB053314-1|BAB69022.1| 445|Homo sapiens ALS2CR12 protein. 31 6.0
BC117417-1|AAI17418.1| 1222|Homo sapiens sortilin-related VPS10 ... 30 7.9
AL596118-1|CAH70023.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.9
AL445492-1|CAH70477.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.9
AL365449-1|CAH70813.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.9
AL358949-1|CAH72221.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.9
AL353900-2|CAI64579.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.9
AL161646-1|CAH70335.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.9
AB028982-1|BAA83011.2| 1222|Homo sapiens KIAA1059 protein protein. 30 7.9
>U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein.
Length = 1017
Score = 35.1 bits (77), Expect = 0.28
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Frame = -1
Query: 648 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 484
++G+ K+ +R+ D K LH+ + +GE D L+DK+E++ + ++ N E ++
Sbjct: 21 RRGIEKLRVRIEADEKKQ--LHIAEKLKERDGENDSLKDKVENLERELQMSEENQELVIL 78
Query: 483 THETFKNDV---GIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESK 349
E K +V + E+ L + L L+S ++ T + E +
Sbjct: 79 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQ 126
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 34.7 bits (76), Expect = 0.37
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -1
Query: 648 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 484
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2117 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2174
Query: 483 THETFKNDV---GIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 313
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2175 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2234
Query: 312 HQHLAIFSERIDDRIK 265
+ L E+ + +IK
Sbjct: 2235 FKSLLEEKEQAEIQIK 2250
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 34.7 bits (76), Expect = 0.37
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -1
Query: 648 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 484
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2214 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2271
Query: 483 THETFKNDV---GIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 313
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2272 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2331
Query: 312 HQHLAIFSERIDDRIK 265
+ L E+ + +IK
Sbjct: 2332 FKSLLEEKEQAEIQIK 2347
>BC031603-1|AAH31603.1| 422|Homo sapiens ALS2CR12 protein protein.
Length = 422
Score = 34.7 bits (76), Expect = 0.37
Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 11/222 (4%)
Frame = -1
Query: 738 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERD 559
SD ++E+ ++ RD S L +++ L M+ NF+NK+ L E E
Sbjct: 128 SDLEEQISELTAIIEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAH-EAELS 186
Query: 558 DLRDKIESVLKHVK-----KLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNML 394
+L + ++ LK K KL +++ F+ +++ E + ++ AK
Sbjct: 187 ELENNYKAALKAEKLAAQEKLEEMGKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKD 246
Query: 393 QSAEKLKTAIVTESKNGTVTFPRDITKHQH------LAIFSERIDDRIKLAFVLGQERHF 232
+ E+ + ++ + K T F + + A+F I ++ +L L Q +
Sbjct: 247 EKFER-ENILLQQKKKMTKKFEMESGEEDKKINESCSAVFENFIQEKEEL---LKQHQSD 302
Query: 231 RKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRK 106
+ EV+ + +H L+ ++ +N LY +++K
Sbjct: 303 TLQLEELRKTKEVMQEELHAQALI-LESLNTNLYYTQLELQK 343
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 34.7 bits (76), Expect = 0.37
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -1
Query: 648 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 484
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2118 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2175
Query: 483 THETFKNDV---GIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 313
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2176 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2235
Query: 312 HQHLAIFSERIDDRIK 265
+ L E+ + +IK
Sbjct: 2236 FKSLLEEKEQAEIQIK 2251
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 34.7 bits (76), Expect = 0.37
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -1
Query: 648 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 484
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2118 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2175
Query: 483 THETFKNDV---GIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 313
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2176 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2235
Query: 312 HQHLAIFSERIDDRIK 265
+ L E+ + +IK
Sbjct: 2236 FKSLLEEKEQAEIQIK 2251
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.48
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 430 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 254
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 253 FGPRATFSQ 227
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.48
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 430 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 254
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 253 FGPRATFSQ 227
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>AL512506-1|CAI16114.1| 273|Homo sapiens novel protein protein.
Length = 273
Score = 33.5 bits (73), Expect = 0.85
Identities = 16/64 (25%), Positives = 36/64 (56%)
Frame = -1
Query: 579 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAKLN 400
Q + + +L+DKI +V + + + E+ THE + ++ ++ ++++ L L ++N
Sbjct: 183 QVQEDITNLKDKIITVKESIIEKTCFLEEEKKTHEKLRKEIEVQHKRYDAILKRLHCQVN 242
Query: 399 MLQS 388
LQS
Sbjct: 243 KLQS 246
>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dynein
type 3 protein.
Length = 4116
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = -1
Query: 612 FDNKSNALLHLQTEGERDDLRDKIESVLK---HVKKLNTNSEKFMVTHETFKNDVGIRFE 442
FDN N LLH + + E D ++ E L+ + ++L + ++ ++T E K++V +
Sbjct: 768 FDNSRNLLLHKRDQAEMDLIKRCSEFELRLEGYHRELESFRKREVMTTEEMKHNVE-KLN 826
Query: 441 QFELRLNELDAKLNMLQSAEKL 376
+ LN A+ ++ E+L
Sbjct: 827 ELSKNLNRAFAEFELINKEEEL 848
>U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open reading
frame protein.
Length = 182
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 704 FTSRNPNAISTRWAHCSRPSRGC 636
FT P A W CSRP+RGC
Sbjct: 60 FTPTQPRAPRPPWTPCSRPTRGC 82
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 30.7 bits (66), Expect = 6.0
Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = -1
Query: 564 RDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELD----AKLNM 397
+++L D+++ H++ ++ +++ ET N++ + + + ++++LD AK +
Sbjct: 595 QENLHDQVQEQKAHLRA----AQDRVLSLETSVNELNSQLNESKEKVSQLDIQIKAKTEL 650
Query: 396 LQSAEKLKTAIVTESKNGTVTFPRDI-TKHQHLAIFSERID 277
L SAE KTA + +N T + KHQ L + ++D
Sbjct: 651 LLSAEAAKTAQRADLQNHLDTAQNALQDKHQELNKITTQLD 691
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 30.7 bits (66), Expect = 6.0
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 720 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKI 541
L++I F K++ K++L + L L L K N LL + + +KI
Sbjct: 528 LSKIEFEKRQIKKELEHYKEKGERAEELENELHHLE---KENELLQKKITNLKITC-EKI 583
Query: 540 ESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAK-LNMLQSAEKLKTA 367
E++ + +L + K T ++FKN + + E E ++LD + L + ++ E LK A
Sbjct: 584 EALEQENSELERENRKLKKTLDSFKN-LTFQLESLEKENSQLDEENLELRRNVESLKCA 641
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 30.7 bits (66), Expect = 6.0
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 720 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKI 541
L++I F K++ K++L + L L L K N LL + + +KI
Sbjct: 603 LSKIEFEKRQIKKELEHYKEKGERAEELENELHHLE---KENELLQKKITNLKITC-EKI 658
Query: 540 ESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAK-LNMLQSAEKLKTA 367
E++ + +L + K T ++FKN + + E E ++LD + L + ++ E LK A
Sbjct: 659 EALEQENSELERENRKLKKTLDSFKN-LTFQLESLEKENSQLDEENLELRRNVESLKCA 716
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 30.7 bits (66), Expect = 6.0
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 720 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKI 541
L++I F K++ K++L + L L L K N LL + + +KI
Sbjct: 600 LSKIEFEKRQIKKELEHYKEKGERAEELENELHHLE---KENELLQKKITNLKITC-EKI 655
Query: 540 ESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAK-LNMLQSAEKLKTA 367
E++ + +L + K T ++FKN + + E E ++LD + L + ++ E LK A
Sbjct: 656 EALEQENSELERENRKLKKTLDSFKN-LTFQLESLEKENSQLDEENLELRRNVESLKCA 713
>AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein
FLJ32110 protein.
Length = 1349
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 180 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 55
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -1
Query: 243 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 64
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -1
Query: 243 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 64
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -1
Query: 243 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 64
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32110 fis, clone OCBBF2001527. ).
Length = 600
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 180 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 55
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5314
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -1
Query: 243 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 64
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -1
Query: 243 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 64
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 30.7 bits (66), Expect = 6.0
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 720 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKI 541
L++I F K++ K++L + L L L K N LL + + +KI
Sbjct: 528 LSKIEFEKRQIKKELEHYKEKGERAEELENELHHLE---KENELLQKKITNLKITC-EKI 583
Query: 540 ESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAK-LNMLQSAEKLKTA 367
E++ + +L + K T ++FKN + + E E ++LD + L + ++ E LK A
Sbjct: 584 EALEQENSELERENRKLKKTLDSFKN-LTFQLESLEKENSQLDEENLELRRNVESLKCA 641
>AC007256-2|AAY24226.1| 445|Homo sapiens unknown protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.0
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = -1
Query: 738 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERD 559
SD ++E+ ++ RD S L +++ L M+ NF+NK+ L E E
Sbjct: 128 SDLEEQISELTAIIEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAH-EAELS 186
Query: 558 DLRDKIESVLKHVK-----KLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNML 394
+L + ++ LK K KL +++ F+ +++ E + ++ AK
Sbjct: 187 ELENNYKAALKAEKLAAQEKLEEMGKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKD 246
Query: 393 QSAEKLKTAIVTESKNGTVTF 331
+ E+ + ++ + K T F
Sbjct: 247 EKFER-ENILLQQKKKMTKKF 266
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 30.7 bits (66), Expect = 6.0
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 720 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKI 541
L++I F K++ K++L + L L L K N LL + + +KI
Sbjct: 603 LSKIEFEKRQIKKELEHYKEKGERAEELENELHHLE---KENELLQKKITNLKITC-EKI 658
Query: 540 ESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAK-LNMLQSAEKLKTA 367
E++ + +L + K T ++FKN + + E E ++LD + L + ++ E LK A
Sbjct: 659 EALEQENSELERENRKLKKTLDSFKN-LTFQLESLEKENSQLDEENLELRRNVESLKCA 716
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 30.7 bits (66), Expect = 6.0
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 720 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKI 541
L++I F K++ K++L + L L L K N LL + + +KI
Sbjct: 603 LSKIEFEKRQIKKELEHYKEKGERAEELENELHHLE---KENELLQKKITNLKITC-EKI 658
Query: 540 ESVLKHVKKLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAK-LNMLQSAEKLKTA 367
E++ + +L + K T ++FKN + + E E ++LD + L + ++ E LK A
Sbjct: 659 EALEQENSELERENRKLKKTLDSFKN-LTFQLESLEKENSQLDEENLELRRNVESLKCA 716
>AB053314-1|BAB69022.1| 445|Homo sapiens ALS2CR12 protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.0
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = -1
Query: 738 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERD 559
SD ++E+ ++ RD S L +++ L M+ NF+NK+ L E E
Sbjct: 128 SDLEEQISELTAIIEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAH-EAELS 186
Query: 558 DLRDKIESVLKHVK-----KLNTNSEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNML 394
+L + ++ LK K KL +++ F+ +++ E + ++ AK
Sbjct: 187 ELENNYKAALKAEKLAAQEKLEEMGKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKD 246
Query: 393 QSAEKLKTAIVTESKNGTVTF 331
+ E+ + ++ + K T F
Sbjct: 247 EKFER-ENILLQQKKKMTKKF 266
>BC117417-1|AAI17418.1| 1222|Homo sapiens sortilin-related VPS10
domain containing receptor 3 protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AL596118-1|CAH70023.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AL445492-1|CAH70477.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AL365449-1|CAH70813.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AL358949-1|CAH72221.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AL353900-2|CAI64579.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AL161646-1|CAH70335.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
>AB028982-1|BAA83011.2| 1222|Homo sapiens KIAA1059 protein protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/111 (21%), Positives = 53/111 (47%)
Frame = -1
Query: 501 SEKFMVTHETFKNDVGIRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRD 322
S + T+E + VG++ L +N + + ML S +++++I+ S G
Sbjct: 233 STDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYR 292
Query: 321 ITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPN 169
+T + +F + +D + LA+ L Q+ + M F +++++ + PN
Sbjct: 293 LTFYIQSLLFHPKQEDWV-LAYSLDQKLY---SSMDFGRRWQLMHERITPN 339
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,664,794
Number of Sequences: 237096
Number of extensions: 2076602
Number of successful extensions: 5558
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5555
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -