Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16o09
(759 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089288-1|AAL90026.1| 598|Drosophila melanogaster AT08391p pro... 31 1.3
AE014296-3315|AAF49042.1| 598|Drosophila melanogaster CG17122-P... 31 1.3
U35621-1|AAB82065.1| 1148|Drosophila melanogaster CNN protein. 30 3.0
BT021269-1|AAX33417.1| 1130|Drosophila melanogaster RE46972p pro... 30 3.0
BT010053-1|AAQ22522.1| 1148|Drosophila melanogaster LD19135p pro... 30 3.0
AE013599-1716|AAF58376.2| 1320|Drosophila melanogaster CG4832-PC... 30 3.0
AE013599-1715|AAX52706.1| 1090|Drosophila melanogaster CG4832-PD... 30 3.0
AE013599-1714|ABC66061.1| 1130|Drosophila melanogaster CG4832-PE... 30 3.0
AE013599-1713|AAM68579.1| 1120|Drosophila melanogaster CG4832-PB... 30 3.0
AE013599-1712|AAF58375.1| 1148|Drosophila melanogaster CG4832-PA... 30 3.0
AE014297-1358|AAF54682.3| 895|Drosophila melanogaster CG6834-PA... 30 3.9
AY113442-1|AAM29447.1| 803|Drosophila melanogaster RE28849p pro... 29 5.2
AY071446-1|AAL49068.1| 803|Drosophila melanogaster RE52979p pro... 29 5.2
>AY089288-1|AAL90026.1| 598|Drosophila melanogaster AT08391p
protein.
Length = 598
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 267 KLAFVLGQERHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR- 94
K+ + G R++ K K ++ +EVL Y + + L A +C N K D K+R +AKR
Sbjct: 265 KIKIIEGLTRNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRM 321
Query: 93 -VIDVD 79
++D+D
Sbjct: 322 EILDLD 327
>AE014296-3315|AAF49042.1| 598|Drosophila melanogaster CG17122-PA
protein.
Length = 598
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 267 KLAFVLGQERHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR- 94
K+ + G R++ K K ++ +EVL Y + + L A +C N K D K+R +AKR
Sbjct: 265 KIKIIEGLTRNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRM 321
Query: 93 -VIDVD 79
++D+D
Sbjct: 322 EILDLD 327
>U35621-1|AAB82065.1| 1148|Drosophila melanogaster CNN protein.
Length = 1148
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 329 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 383
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 384 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>BT021269-1|AAX33417.1| 1130|Drosophila melanogaster RE46972p
protein.
Length = 1130
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 311 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 365
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 366 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 395
>BT010053-1|AAQ22522.1| 1148|Drosophila melanogaster LD19135p
protein.
Length = 1148
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 329 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 383
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 384 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>AE013599-1716|AAF58376.2| 1320|Drosophila melanogaster CG4832-PC,
isoform C protein.
Length = 1320
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 501 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 555
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 556 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 585
>AE013599-1715|AAX52706.1| 1090|Drosophila melanogaster CG4832-PD,
isoform D protein.
Length = 1090
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 271 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 325
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 326 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 355
>AE013599-1714|ABC66061.1| 1130|Drosophila melanogaster CG4832-PE,
isoform E protein.
Length = 1130
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 311 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 365
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 366 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 395
>AE013599-1713|AAM68579.1| 1120|Drosophila melanogaster CG4832-PB,
isoform B protein.
Length = 1120
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 301 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 355
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 356 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 385
>AE013599-1712|AAF58375.1| 1148|Drosophila melanogaster CG4832-PA,
isoform A protein.
Length = 1148
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 633 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVG 454
K++ +L+ K L+ + E + D ++V+ ++S + M +E ++
Sbjct: 329 KLMQKLSSQEKEIKKLNQENEQSANKENDCAKTVISP-----SSSGRSMSDNEASSQEMS 383
Query: 453 IRFE-QFELRLNELDAKLNMLQSAEKLKTA 367
++EL++NE + K+ LQ+ K KTA
Sbjct: 384 TNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>AE014297-1358|AAF54682.3| 895|Drosophila melanogaster CG6834-PA
protein.
Length = 895
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 55 LFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 231
LF I++++H+DY YF F+ E L+ + H++ H S A
Sbjct: 350 LFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLDLLGFTGKQPSLRELHMLMYKHGSWA 408
>AY113442-1|AAM29447.1| 803|Drosophila melanogaster RE28849p
protein.
Length = 803
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 55 LFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 231
LF I++++H+DY YF F+ E L + H++ H S A
Sbjct: 258 LFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316
>AY071446-1|AAL49068.1| 803|Drosophila melanogaster RE52979p
protein.
Length = 803
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 55 LFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 231
LF I++++H+DY YF F+ E L + H++ H S A
Sbjct: 258 LFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,201,742
Number of Sequences: 53049
Number of extensions: 698408
Number of successful extensions: 1989
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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