Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16n12
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ388145-2|ABD72216.1| 1482|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388144-2|ABD72214.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388143-2|ABD72212.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388142-2|ABD72210.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388141-2|ABD72208.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388140-2|ABD72206.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388139-2|ABD72204.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388138-2|ABD72202.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388137-2|ABD72200.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388136-2|ABD72198.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388135-2|ABD72196.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388134-2|ABD72194.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388133-2|ABD72192.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388132-2|ABD72190.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388131-2|ABD72188.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388130-2|ABD72186.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388129-2|ABD72184.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ388128-2|ABD72182.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356264-2|ABC87066.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356263-2|ABC87064.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356262-2|ABC87062.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356261-2|ABC87060.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356260-2|ABC87058.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356259-2|ABC87056.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356258-2|ABC87054.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ356257-2|ABC87052.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ354391-2|ABC79055.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ354390-2|ABC79053.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ354389-2|ABC79051.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
DQ354388-2|ABC79049.1| 1663|Homo sapiens CTTNBP2 protein. 33 1.1
BC106000-1|AAI06001.1| 1663|Homo sapiens cortactin binding prote... 33 1.1
AF377960-1|AAL32176.1| 1663|Homo sapiens cortactin-binding prote... 33 1.1
AB051545-1|BAB21849.1| 1662|Homo sapiens KIAA1758 protein protein. 33 1.1
AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing p... 31 4.5
AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein. 31 4.5
>DQ388145-2|ABD72216.1| 1482|Homo sapiens CTTNBP2 protein.
Length = 1482
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388144-2|ABD72214.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388143-2|ABD72212.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388142-2|ABD72210.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388141-2|ABD72208.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388140-2|ABD72206.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388139-2|ABD72204.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388138-2|ABD72202.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388137-2|ABD72200.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388136-2|ABD72198.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388135-2|ABD72196.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388134-2|ABD72194.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388133-2|ABD72192.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388132-2|ABD72190.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388131-2|ABD72188.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388130-2|ABD72186.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388129-2|ABD72184.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ388128-2|ABD72182.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356264-2|ABC87066.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356263-2|ABC87064.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356262-2|ABC87062.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356261-2|ABC87060.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356260-2|ABC87058.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356259-2|ABC87056.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356258-2|ABC87054.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ356257-2|ABC87052.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ354391-2|ABC79055.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ354390-2|ABC79053.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ354389-2|ABC79051.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>DQ354388-2|ABC79049.1| 1663|Homo sapiens CTTNBP2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>BC106000-1|AAI06001.1| 1663|Homo sapiens cortactin binding protein
2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>AF377960-1|AAL32176.1| 1663|Homo sapiens cortactin-binding protein
2 protein.
Length = 1663
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 395 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 443
>AB051545-1|BAB21849.1| 1662|Homo sapiens KIAA1758 protein protein.
Length = 1662
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 538 TAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPDASVGLHINITP 392
T+ T L T TP + P + +AP S H+P A+ LH + P
Sbjct: 394 TSSTPPLPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNP 442
>AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing
protein protein.
Length = 2386
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 440 GGCRGGPVMVRLDWRCKLCQLEGSLIQFRCISSHTTG 550
GGCRG V + RC+ C +G L C+ SH G
Sbjct: 529 GGCRGWDDSVHSEPRCRSC--DGFLTCHECLQSHECG 563
>AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein.
Length = 2785
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 440 GGCRGGPVMVRLDWRCKLCQLEGSLIQFRCISSHTTG 550
GGCRG V + RC+ C +G L C+ SH G
Sbjct: 928 GGCRGWDDSVHSEPRCRSC--DGFLTCHECLQSHECG 962
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,278,470
Number of Sequences: 237096
Number of extensions: 2793377
Number of successful extensions: 9151
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 8759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9151
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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