Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16m18
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069195-1|AAL39340.1| 257|Drosophila melanogaster GH25425p pro... 52 7e-07
AE014134-2237|AAF53219.2| 257|Drosophila melanogaster CG6180-PA... 52 7e-07
AY113352-1|AAM29357.1| 187|Drosophila melanogaster GH28351p pro... 52 1e-06
AE014297-440|AAF54137.1| 187|Drosophila melanogaster CG10298-PA... 52 1e-06
AY075337-1|AAL68202.1| 202|Drosophila melanogaster GH14494p pro... 44 2e-04
AE014297-441|AAF54136.1| 202|Drosophila melanogaster CG17919-PA... 44 2e-04
AY060707-1|AAL28255.1| 179|Drosophila melanogaster GH14779p pro... 39 0.007
AE014297-3161|AAF56003.1| 179|Drosophila melanogaster CG7054-PA... 39 0.007
U05243-1|AAC46472.1| 210|Drosophila melanogaster A5 protein. 36 0.047
AE014134-237|AAF51385.1| 210|Drosophila melanogaster CG5430-PA ... 36 0.047
AY119094-1|AAM50954.1| 176|Drosophila melanogaster LP12095p pro... 36 0.083
AE014297-3162|AAF56004.1| 176|Drosophila melanogaster CG18594-P... 36 0.083
>AY069195-1|AAL39340.1| 257|Drosophila melanogaster GH25425p
protein.
Length = 257
Score = 52.4 bits (120), Expect = 7e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1
Query: 773 FKNCRVRQEVQPRDPIAGNFYEAQYDDYVPILYKQLGA 660
FK ++ +PIAGN Y+A+YDDYVPILYKQLGA
Sbjct: 220 FKIAEFAKKYALGNPIAGNLYQAEYDDYVPILYKQLGA 257
>AE014134-2237|AAF53219.2| 257|Drosophila melanogaster CG6180-PA
protein.
Length = 257
Score = 52.4 bits (120), Expect = 7e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1
Query: 773 FKNCRVRQEVQPRDPIAGNFYEAQYDDYVPILYKQLGA 660
FK ++ +PIAGN Y+A+YDDYVPILYKQLGA
Sbjct: 220 FKIAEFAKKYALGNPIAGNLYQAEYDDYVPILYKQLGA 257
>AY113352-1|AAM29357.1| 187|Drosophila melanogaster GH28351p
protein.
Length = 187
Score = 51.6 bits (118), Expect = 1e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -1
Query: 779 ANFKNCRVRQEVQPRDPIAGNFYEAQYDDYVPILYKQL 666
ANF + + + DPIAGNF++AQ+DDYVP LYKQL
Sbjct: 146 ANFSTSKFMSKYKLGDPIAGNFFQAQWDDYVPKLYKQL 183
>AE014297-440|AAF54137.1| 187|Drosophila melanogaster CG10298-PA
protein.
Length = 187
Score = 51.6 bits (118), Expect = 1e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -1
Query: 779 ANFKNCRVRQEVQPRDPIAGNFYEAQYDDYVPILYKQL 666
ANF + + + DPIAGNF++AQ+DDYVP LYKQL
Sbjct: 146 ANFSTSKFMSKYKLGDPIAGNFFQAQWDDYVPKLYKQL 183
>AY075337-1|AAL68202.1| 202|Drosophila melanogaster GH14494p
protein.
Length = 202
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = -1
Query: 734 DPIAGNFYEAQYDDYVPILYKQL 666
+PIAG FY+AQYDDYVP L+KQL
Sbjct: 177 NPIAGTFYQAQYDDYVPKLHKQL 199
>AE014297-441|AAF54136.1| 202|Drosophila melanogaster CG17919-PA
protein.
Length = 202
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = -1
Query: 734 DPIAGNFYEAQYDDYVPILYKQL 666
+PIAG FY+AQYDDYVP L+KQL
Sbjct: 177 NPIAGTFYQAQYDDYVPKLHKQL 199
>AY060707-1|AAL28255.1| 179|Drosophila melanogaster GH14779p
protein.
Length = 179
Score = 39.1 bits (87), Expect = 0.007
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -1
Query: 734 DPIAGNFYEAQYDDYVPILYKQL 666
+PIA N+Y+AQYDDYVPI K +
Sbjct: 155 EPIAANYYQAQYDDYVPIRNKTI 177
>AE014297-3161|AAF56003.1| 179|Drosophila melanogaster CG7054-PA
protein.
Length = 179
Score = 39.1 bits (87), Expect = 0.007
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -1
Query: 734 DPIAGNFYEAQYDDYVPILYKQL 666
+PIA N+Y+AQYDDYVPI K +
Sbjct: 155 EPIAANYYQAQYDDYVPIRNKTI 177
>U05243-1|AAC46472.1| 210|Drosophila melanogaster A5 protein.
Length = 210
Score = 36.3 bits (80), Expect = 0.047
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 779 ANFKNCRVRQEVQPRDPIAGNFYEAQYDDYVPILYKQL 666
+NF + Q+ + P+AGN +++++D+YVP L K L
Sbjct: 168 SNFDVMKFTQKYEMGSPVAGNIFQSRWDEYVPELMKTL 205
>AE014134-237|AAF51385.1| 210|Drosophila melanogaster CG5430-PA
protein.
Length = 210
Score = 36.3 bits (80), Expect = 0.047
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 779 ANFKNCRVRQEVQPRDPIAGNFYEAQYDDYVPILYKQL 666
+NF + Q+ + P+AGN +++++D+YVP L K L
Sbjct: 168 SNFDVMKFTQKYEMGSPVAGNIFQSRWDEYVPELMKTL 205
>AY119094-1|AAM50954.1| 176|Drosophila melanogaster LP12095p
protein.
Length = 176
Score = 35.5 bits (78), Expect = 0.083
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 731 PIAGNFYEAQYDDYVPIL 678
P+AGNF++AQYDDYV L
Sbjct: 154 PVAGNFFQAQYDDYVKTL 171
>AE014297-3162|AAF56004.1| 176|Drosophila melanogaster CG18594-PA
protein.
Length = 176
Score = 35.5 bits (78), Expect = 0.083
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 731 PIAGNFYEAQYDDYVPIL 678
P+AGNF++AQYDDYV L
Sbjct: 154 PVAGNFFQAQYDDYVKTL 171
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,204,501
Number of Sequences: 53049
Number of extensions: 682112
Number of successful extensions: 1550
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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