Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16m07
(786 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 29 0.16
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 29 0.16
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 29 0.16
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 29 0.22
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 29 0.22
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 29 0.22
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 29 0.22
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 29 0.22
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 26 1.5
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 26 1.5
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 25 2.7
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 23 8.1
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 29.1 bits (62), Expect = 0.16
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TPV +W++P T
Sbjct: 117 WITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTT 170
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 29.1 bits (62), Expect = 0.16
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TPV +W++P T
Sbjct: 117 WITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTT 170
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 29.1 bits (62), Expect = 0.16
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TPV +W++P T
Sbjct: 118 WITTTTTEATTTTKFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTT 171
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 28.7 bits (61), Expect = 0.22
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TP+ +W++P T
Sbjct: 118 WITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTT 171
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 28.7 bits (61), Expect = 0.22
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TP+ +W++P T
Sbjct: 118 WITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTT 171
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 28.7 bits (61), Expect = 0.22
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TP+ +W++P T
Sbjct: 118 WITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTT 171
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 28.7 bits (61), Expect = 0.22
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TP+ +W++P T
Sbjct: 118 WITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTT 171
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 28.7 bits (61), Expect = 0.22
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 786 WTTPSSTSRTTGAXTPSRPTPTRELTTSAGTIPR----TPVLRTWASWTSPRAT 637
W T ++T TT P+ T + T S T P TP+ +W++P T
Sbjct: 118 WITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTT 171
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 25.8 bits (54), Expect = 1.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 780 TPSSTSRTTGAXTPSRPTPTRELTTSAGTIPRTPVLR 670
+PS ++ G +P P P + S G +PR VL+
Sbjct: 770 SPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTVLQ 806
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 25.8 bits (54), Expect = 1.5
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 751 GXDTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPE--GDEQKLMEAVATVGPVSVAID- 581
G T++++ +G D R PK D D+ D K ++ + +G + +A +
Sbjct: 1265 GATTKKSFAADGTDVTVREKPKQESNRDADVKDLERTIWDRSKQLK-IIDLGALKLADEV 1323
Query: 580 ASHTSFQLYSSGVYNEEE 527
AS+ F+ Y Y ++
Sbjct: 1324 ASYYGFEAYELNRYGVDK 1341
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 92 PTCIAQSLTAVGGQLWYCRPQVCETSNLIFKLI 190
P C+ ++T + G WY CET ++ K++
Sbjct: 161 PYCVLDTITYMMGGYWY---MACETLSITAKIL 190
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 23.4 bits (48), Expect = 8.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 783 TTPSSTSRTTGAXTPSRPTPTRELTTSA 700
+TPSS++ ++ + T S + + + TTSA
Sbjct: 540 STPSSSTTSSSSTTSSSSSSSSKTTTSA 567
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,125
Number of Sequences: 2352
Number of extensions: 11201
Number of successful extensions: 80
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -