Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16m05
(719 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075384-1|AAL68222.1| 787|Drosophila melanogaster LD23641p pro... 175 7e-44
AE014297-4205|AAF56765.1| 787|Drosophila melanogaster CG5520-PA... 175 7e-44
X03810-2|CAA27435.1| 717|Drosophila melanogaster hsp 82 protein. 69 5e-12
AY122080-1|AAM52592.1| 717|Drosophila melanogaster AT20544p pro... 69 5e-12
AE014296-590|AAF47734.1| 717|Drosophila melanogaster CG1242-PA ... 69 5e-12
>AY075384-1|AAL68222.1| 787|Drosophila melanogaster LD23641p protein.
Length = 787
Score = 175 bits (425), Expect = 7e-44
Identities = 87/171 (50%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Frame = -1
Query: 719 PEYDGHKFQNIAKEIFDXEEGDRAKEKLEAYKKQYEPLTRWLGD-KLGSWITRATVXXXX 543
PE+DG KFQN+AKE F E +++K+ E+ K +EPL +WL D L I++A V
Sbjct: 578 PEFDGKKFQNVAKEGFQLNESEKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERL 637
Query: 542 XXXXXXXXXXAFGWTGNMERLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRR 363
FGWTGNMERLA+SNAHQK+DDPQR ++L QKK LEINPRHP++ ELLRR
Sbjct: 638 SNSPCALVAGVFGWTGNMERLAMSNAHQKSDDPQRTYYLNQKKTLEINPRHPLMRELLRR 697
Query: 362 VQXXXXXXXXXXXAHTLYRTAALRSGYVLQEGQAVLFADSVETMLQRTLGL 210
V+ A ++RTA LRSGY+LQE FADS+E M+++TLG+
Sbjct: 698 VEADEADDTAKDMAVMMFRTATLRSGYMLQETSQ--FADSIEQMMRQTLGV 746
>AE014297-4205|AAF56765.1| 787|Drosophila melanogaster CG5520-PA
protein.
Length = 787
Score = 175 bits (425), Expect = 7e-44
Identities = 87/171 (50%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Frame = -1
Query: 719 PEYDGHKFQNIAKEIFDXEEGDRAKEKLEAYKKQYEPLTRWLGD-KLGSWITRATVXXXX 543
PE+DG KFQN+AKE F E +++K+ E+ K +EPL +WL D L I++A V
Sbjct: 578 PEFDGKKFQNVAKEGFQLNESEKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERL 637
Query: 542 XXXXXXXXXXAFGWTGNMERLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRR 363
FGWTGNMERLA+SNAHQK+DDPQR ++L QKK LEINPRHP++ ELLRR
Sbjct: 638 SNSPCALVAGVFGWTGNMERLAMSNAHQKSDDPQRTYYLNQKKTLEINPRHPLMRELLRR 697
Query: 362 VQXXXXXXXXXXXAHTLYRTAALRSGYVLQEGQAVLFADSVETMLQRTLGL 210
V+ A ++RTA LRSGY+LQE FADS+E M+++TLG+
Sbjct: 698 VEADEADDTAKDMAVMMFRTATLRSGYMLQETSQ--FADSIEQMMRQTLGV 746
>X03810-2|CAA27435.1| 717|Drosophila melanogaster hsp 82 protein.
Length = 717
Score = 69.3 bits (162), Expect = 5e-12
Identities = 46/169 (27%), Positives = 75/169 (44%)
Frame = -1
Query: 716 EYDGHKFQNIAKEIFDXEEGDRAKEKLEAYKKQYEPLTRWLGDKLGSWITRATVXXXXXX 537
EY G + ++ KE + E + K+K E K ++E L + + L + + + V
Sbjct: 520 EYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVD 579
Query: 536 XXXXXXXXAFGWTGNMERLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQ 357
FGW+ NMER+ + A + D ++ KK LEINP HPIV L ++
Sbjct: 580 SPCCIVTSQFGWSANMERIMKAQALR---DTATMGYMAGKKQLEINPDHPIVETLRQKAD 636
Query: 356 XXXXXXXXXXXAHTLYRTAALRSGYVLQEGQAVLFADSVETMLQRTLGL 210
L+ T+ L SG+ L Q + A + M++ LG+
Sbjct: 637 ADKNDKAVKDLVILLFETSLLSSGFSLDSPQ--VHASRIYRMIKLGLGI 683
>AY122080-1|AAM52592.1| 717|Drosophila melanogaster AT20544p protein.
Length = 717
Score = 69.3 bits (162), Expect = 5e-12
Identities = 46/169 (27%), Positives = 75/169 (44%)
Frame = -1
Query: 716 EYDGHKFQNIAKEIFDXEEGDRAKEKLEAYKKQYEPLTRWLGDKLGSWITRATVXXXXXX 537
EY G + ++ KE + E + K+K E K ++E L + + L + + + V
Sbjct: 520 EYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVD 579
Query: 536 XXXXXXXXAFGWTGNMERLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQ 357
FGW+ NMER+ + A + D ++ KK LEINP HPIV L ++
Sbjct: 580 SPCCIVTSQFGWSANMERIMKAQALR---DTATMGYMAGKKQLEINPDHPIVETLRQKAD 636
Query: 356 XXXXXXXXXXXAHTLYRTAALRSGYVLQEGQAVLFADSVETMLQRTLGL 210
L+ T+ L SG+ L Q + A + M++ LG+
Sbjct: 637 ADKNDKAVKDLVILLFETSLLSSGFSLDSPQ--VHASRIYRMIKLGLGI 683
>AE014296-590|AAF47734.1| 717|Drosophila melanogaster CG1242-PA
protein.
Length = 717
Score = 69.3 bits (162), Expect = 5e-12
Identities = 46/169 (27%), Positives = 75/169 (44%)
Frame = -1
Query: 716 EYDGHKFQNIAKEIFDXEEGDRAKEKLEAYKKQYEPLTRWLGDKLGSWITRATVXXXXXX 537
EY G + ++ KE + E + K+K E K ++E L + + L + + + V
Sbjct: 520 EYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVD 579
Query: 536 XXXXXXXXAFGWTGNMERLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQ 357
FGW+ NMER+ + A + D ++ KK LEINP HPIV L ++
Sbjct: 580 SPCCIVTSQFGWSANMERIMKAQALR---DTATMGYMAGKKQLEINPDHPIVETLRQKAD 636
Query: 356 XXXXXXXXXXXAHTLYRTAALRSGYVLQEGQAVLFADSVETMLQRTLGL 210
L+ T+ L SG+ L Q + A + M++ LG+
Sbjct: 637 ADKNDKAVKDLVILLFETSLLSSGFSLDSPQ--VHASRIYRMIKLGLGI 683
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,670,489
Number of Sequences: 53049
Number of extensions: 158064
Number of successful extensions: 711
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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