Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16l04
(775 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072461-1|AAH72461.1| 332|Homo sapiens cysteine and histidine-... 209 1e-53
AF123249-1|AAG43237.1| 313|Homo sapiens protein ( Homo sapiens ... 208 1e-53
AF192466-1|AAF18437.1| 332|Homo sapiens CHORD containing protei... 202 8e-52
BC108901-1|AAI08902.1| 329|Homo sapiens ITGB1BP2 protein protein. 186 1e-46
AF140690-1|AAF01676.1| 347|Homo sapiens melusin protein. 186 1e-46
AF110225-1|AAL36913.1| 347|Homo sapiens MSTP015 protein. 186 1e-46
BC017789-1|AAH17789.1| 116|Homo sapiens CHORDC1 protein protein. 98 4e-20
BT009798-1|AAP88800.1| 333|Homo sapiens SGT1, suppressor of G2 ... 49 2e-05
BC000911-1|AAH00911.1| 333|Homo sapiens SGT1, suppressor of G2 ... 49 2e-05
AY321358-1|AAQ76039.1| 365|Homo sapiens SUGT1B protein. 49 2e-05
AY271314-1|AAQ01749.1| 365|Homo sapiens SGT1B protein protein. 49 2e-05
AL139089-2|CAI17072.1| 333|Homo sapiens SGT1, suppressor of G2 ... 49 2e-05
AL139089-1|CAM23909.1| 365|Homo sapiens SGT1, suppressor of G2 ... 49 2e-05
AJ344097-1|CAC51433.1| 333|Homo sapiens putative 40-6-3 protein... 49 2e-05
AF132856-1|AAD30062.1| 333|Homo sapiens suppressor of G2 allele... 49 2e-05
CR457249-1|CAG33530.1| 305|Homo sapiens FBXO34 protein. 32 2.0
BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein. 32 2.0
BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein. 32 2.0
BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein. 32 2.0
AK000732-1|BAA91346.1| 305|Homo sapiens protein ( Homo sapiens ... 32 2.0
BC114338-1|AAI14339.1| 213|Homo sapiens C-type lectin domain fa... 30 8.0
BC102017-1|AAI02018.1| 213|Homo sapiens C-type lectin domain fa... 30 8.0
BC102016-1|AAI02017.1| 213|Homo sapiens C-type lectin domain fa... 30 8.0
BC102015-1|AAI02016.1| 213|Homo sapiens C-type lectin domain fa... 30 8.0
BC074968-1|AAH74968.1| 213|Homo sapiens C-type lectin domain fa... 30 8.0
BC074967-1|AAH74967.1| 213|Homo sapiens C-type lectin domain fa... 30 8.0
BC015350-1|AAH15350.1| 358|Homo sapiens QTRT1 protein protein. 30 8.0
AF325460-1|AAL37359.1| 182|Homo sapiens dendritic lectin b isof... 30 8.0
AF325459-1|AAL37358.1| 213|Homo sapiens dendritic lectin protein. 30 8.0
AF302784-1|AAG60034.1| 379|Homo sapiens tRNA-guanine transglyco... 30 8.0
AF302783-1|AAG60033.1| 403|Homo sapiens tRNA-guanine transglyco... 30 8.0
AF293615-1|AAL37036.1| 213|Homo sapiens blood dendritic cell an... 30 8.0
>BC072461-1|AAH72461.1| 332|Homo sapiens cysteine and
histidine-rich domain (CHORD)-containing 1 protein.
Length = 332
Score = 209 bits (510), Expect = 1e-53
Identities = 91/203 (44%), Positives = 133/203 (65%)
Frame = -3
Query: 755 ESLKQSQPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPGCPIFHEGL 576
+ LK S N E K D + IGTSCKNGGC+ ++G ++ E +C YH G PIFHEG+
Sbjct: 131 DKLKLSSGNEENKKEEDND-EIKIGTSCKNGGCSKTYQGLESLEEVCVYHSGVPIFHEGM 189
Query: 575 KFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTVQCRWDWHQTPEHVIVSVYAKK 396
K+WSCC+++T+DFNTFL Q GCT G H W K+ + V CR DWHQT V +SVYAK
Sbjct: 190 KYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKN 249
Query: 395 YDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINIERSSASMLGTKVEIKLKKG 216
P LS V+ N LN+ ++F +G+ F+ +++L GVI+++RS +M TK+EI ++K
Sbjct: 250 SLPELSRVEANSTLLNVHIVF--EGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKA 307
Query: 215 EPGSWSKLDFPRTEPKKVEEKST 147
EP W+ L+ P + ++ ++ +T
Sbjct: 308 EPMQWASLELPAAKKQEKQKDAT 330
Score = 86.6 bits (205), Expect = 9e-17
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -3
Query: 674 CKNGGCNTAFEGPQTN-ESLCTYHPGCPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGA 498
C N GC F+ P+TN + CTYHPG P+FH+ LK WSCC++RTTDF+ FL+ GCT G
Sbjct: 5 CYNRGCGQRFD-PETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 497 H 495
H
Sbjct: 64 H 64
>AF123249-1|AAG43237.1| 313|Homo sapiens protein ( Homo sapiens
chymotrypsin-like protein mRNA, complete cds. ).
Length = 313
Score = 208 bits (509), Expect = 1e-53
Identities = 91/203 (44%), Positives = 132/203 (65%)
Frame = -3
Query: 755 ESLKQSQPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPGCPIFHEGL 576
+ LK S N E K D + IGTSCKNGGC+ ++G ++ E +C YH G PIFHEG+
Sbjct: 112 DKLKLSSGNEENKKEEDND-EIKIGTSCKNGGCSKTYQGLESLEEVCVYHSGVPIFHEGM 170
Query: 575 KFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTVQCRWDWHQTPEHVIVSVYAKK 396
K+WSCC+++T+DFNTFL Q GCT G H W K+ + V CR DWHQT V +SVYAK
Sbjct: 171 KYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKN 230
Query: 395 YDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINIERSSASMLGTKVEIKLKKG 216
P LS V+ N LN+ ++F +G+ F+ +++L GVI+++RS +M TK+EI ++K
Sbjct: 231 SLPELSRVEANSTLLNVHIVF--EGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKA 288
Query: 215 EPGSWSKLDFPRTEPKKVEEKST 147
EP W+ L+ P + ++ ++ T
Sbjct: 289 EPMQWASLELPAAKKQEKQKDDT 311
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 674 CKNGGCNTAFEGPQTN-ESLCTYHPGCPIFHEGLK 573
C N GC F+ P+TN + CTYHPG P+FH+ LK
Sbjct: 5 CYNRGCGQRFD-PETNSDDACTYHPGVPVFHDALK 38
>AF192466-1|AAF18437.1| 332|Homo sapiens CHORD containing protein-1
protein.
Length = 332
Score = 202 bits (494), Expect = 8e-52
Identities = 90/203 (44%), Positives = 131/203 (64%)
Frame = -3
Query: 755 ESLKQSQPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPGCPIFHEGL 576
+ LK S N E K D + IGTSCKNGGC+ ++G ++ E +C YH G PIFHEG+
Sbjct: 131 DKLKLSSGNEENKKEEDND-EIKIGTSCKNGGCSKTYQGLESLEEVCVYHSGVPIFHEGM 189
Query: 575 KFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTVQCRWDWHQTPEHVIVSVYAKK 396
K+WSCC+++T+DFNTFL Q GCT G H W K+ + V CR D HQT V +SVYAK
Sbjct: 190 KYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDLHQTGGEVTISVYAKN 249
Query: 395 YDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINIERSSASMLGTKVEIKLKKG 216
P LS V+ N LN+ ++F +G+ F+ +++L GVI+++RS +M TK+EI ++K
Sbjct: 250 SLPELSRVEANSTLLNVIIVF--EGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKA 307
Query: 215 EPGSWSKLDFPRTEPKKVEEKST 147
EP W+ L+ P + ++ ++ T
Sbjct: 308 EPMQWASLELPAAKKQEKQKDDT 330
Score = 86.6 bits (205), Expect = 9e-17
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -3
Query: 674 CKNGGCNTAFEGPQTN-ESLCTYHPGCPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGA 498
C N GC F+ P+TN + CTYHPG P+FH+ LK WSCC++RTTDF+ FL+ GCT G
Sbjct: 5 CYNRGCGQRFD-PETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 497 H 495
H
Sbjct: 64 H 64
>BC108901-1|AAI08902.1| 329|Homo sapiens ITGB1BP2 protein protein.
Length = 329
Score = 186 bits (452), Expect = 1e-46
Identities = 85/223 (38%), Positives = 134/223 (60%), Gaps = 2/223 (0%)
Frame = -3
Query: 773 LETHIAESLKQS--QPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPG 600
L +I+++L+ + Q +Q+ D + G+SC+N GC+ ++GP+++ + CTYHPG
Sbjct: 96 LPLNISQALEMALEQKELDQEPGAGLDSLIRTGSSCQNPGCDAVYQGPESDATPCTYHPG 155
Query: 599 CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTVQCRWDWHQTPEHV 420
P FHEG+K WSCC +T DF FL QPGC G H W K+ CR DWHQT V
Sbjct: 156 APRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWGKQL----PASCRHDWHQTDSLV 211
Query: 419 IVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINIERSSASMLGTK 240
+V+VY + P ++VK + L++ ++F G+ F+ ++L GVIN+E+SS ++ ++
Sbjct: 212 VVTVYGQIPLPAFNWVKASQTELHVHIVF--DGNRVFQAQMKLWGVINVEQSSVFLMPSR 269
Query: 239 VEIKLKKGEPGSWSKLDFPRTEPKKVEEKSTVQVNTMEDDSVD 111
VEI L K +PGSW++L+ P KK ++++ E D D
Sbjct: 270 VEISLVKADPGSWAQLEHPDALAKKARAGVVLEMDEEESDDSD 312
Score = 71.7 bits (168), Expect = 3e-12
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = -3
Query: 617 CTYHPGCPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAH 495
C +HPG PIFH+ LK WSCC+KRT DF+ FLN GCT G H
Sbjct: 6 CCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTMGPH 46
>AF140690-1|AAF01676.1| 347|Homo sapiens melusin protein.
Length = 347
Score = 186 bits (452), Expect = 1e-46
Identities = 85/223 (38%), Positives = 134/223 (60%), Gaps = 2/223 (0%)
Frame = -3
Query: 773 LETHIAESLKQS--QPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPG 600
L +I+++L+ + Q +Q+ D + G+SC+N GC+ ++GP+++ + CTYHPG
Sbjct: 114 LPLNISQALEMALEQKELDQEPGAGLDSLIRTGSSCQNPGCDAVYQGPESDATPCTYHPG 173
Query: 599 CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTVQCRWDWHQTPEHV 420
P FHEG+K WSCC +T DF FL QPGC G H W K+ CR DWHQT V
Sbjct: 174 APRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWGKQL----PASCRHDWHQTDSLV 229
Query: 419 IVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINIERSSASMLGTK 240
+V+VY + P ++VK + L++ ++F G+ F+ ++L GVIN+E+SS ++ ++
Sbjct: 230 VVTVYGQIPLPAFNWVKASQTELHVHIVF--DGNRVFQAQMKLWGVINVEQSSVFLMPSR 287
Query: 239 VEIKLKKGEPGSWSKLDFPRTEPKKVEEKSTVQVNTMEDDSVD 111
VEI L K +PGSW++L+ P KK ++++ E D D
Sbjct: 288 VEISLVKADPGSWAQLEHPDALAKKARAGVVLEMDEEESDDSD 330
Score = 83.0 bits (196), Expect = 1e-15
Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -3
Query: 674 CKNGGCNTAFEGPQTN-ESLCTYHPGCPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGA 498
C+N GC F+ P TN C +HPG PIFH+ LK WSCC+KRT DF+ FLN GCT G
Sbjct: 5 CRNKGCGQHFD-PNTNLPDSCCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTMGP 63
Query: 497 H 495
H
Sbjct: 64 H 64
>AF110225-1|AAL36913.1| 347|Homo sapiens MSTP015 protein.
Length = 347
Score = 186 bits (452), Expect = 1e-46
Identities = 85/223 (38%), Positives = 134/223 (60%), Gaps = 2/223 (0%)
Frame = -3
Query: 773 LETHIAESLKQS--QPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPG 600
L +I+++L+ + Q +Q+ D + G+SC+N GC+ ++GP+++ + CTYHPG
Sbjct: 114 LPLNISQALEMALEQKELDQEPGAGLDSLIRTGSSCQNPGCDAVYQGPESDATPCTYHPG 173
Query: 599 CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTVQCRWDWHQTPEHV 420
P FHEG+K WSCC +T DF FL QPGC G H W K+ CR DWHQT V
Sbjct: 174 APRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWGKQL----PASCRHDWHQTDSLV 229
Query: 419 IVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINIERSSASMLGTK 240
+V+VY + P ++VK + L++ ++F G+ F+ ++L GVIN+E+SS ++ ++
Sbjct: 230 VVTVYGQIPLPAFNWVKASQTELHVHIVF--DGNRVFQAQMKLWGVINVEQSSVFLMPSR 287
Query: 239 VEIKLKKGEPGSWSKLDFPRTEPKKVEEKSTVQVNTMEDDSVD 111
VEI L K +PGSW++L+ P KK ++++ E D D
Sbjct: 288 VEISLVKADPGSWAQLEHPDALAKKARAGVVLEMDEEESDDSD 330
Score = 83.0 bits (196), Expect = 1e-15
Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -3
Query: 674 CKNGGCNTAFEGPQTN-ESLCTYHPGCPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGA 498
C+N GC F+ P TN C +HPG PIFH+ LK WSCC+KRT DF+ FLN GCT G
Sbjct: 5 CRNKGCGQHFD-PNTNLPDSCCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTMGP 63
Query: 497 H 495
H
Sbjct: 64 H 64
>BC017789-1|AAH17789.1| 116|Homo sapiens CHORDC1 protein protein.
Length = 116
Score = 97.9 bits (233), Expect = 4e-20
Identities = 44/115 (38%), Positives = 72/115 (62%)
Frame = -3
Query: 491 WVKESSNAGTVQCRWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAA 312
W K+ + V CR DWHQT V +SVYAK P LS V+ N LN+ ++F +G+
Sbjct: 2 WTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVF--EGEKE 59
Query: 311 FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKST 147
F+ +++L GVI+++RS +M TK+EI ++K EP W+ L+ P + ++ ++ +T
Sbjct: 60 FDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDAT 114
>BT009798-1|AAP88800.1| 333|Homo sapiens SGT1, suppressor of G2
allele of SKP1 (S. cerevisiae) protein.
Length = 333
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 141 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 198
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 199 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
>BC000911-1|AAH00911.1| 333|Homo sapiens SGT1, suppressor of G2
allele of SKP1 (S. cerevisiae) protein.
Length = 333
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 141 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 198
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 199 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
>AY321358-1|AAQ76039.1| 365|Homo sapiens SUGT1B protein.
Length = 365
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 173 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 230
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 231 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 258
>AY271314-1|AAQ01749.1| 365|Homo sapiens SGT1B protein protein.
Length = 365
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 173 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 230
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 231 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 258
>AL139089-2|CAI17072.1| 333|Homo sapiens SGT1, suppressor of G2
allele of SKP1 (S. cerevisiae) protein.
Length = 333
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 141 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 198
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 199 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
>AL139089-1|CAM23909.1| 365|Homo sapiens SGT1, suppressor of G2
allele of SKP1 (S. cerevisiae) protein.
Length = 365
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 173 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 230
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 231 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 258
>AJ344097-1|CAC51433.1| 333|Homo sapiens putative 40-6-3 protein
protein.
Length = 333
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 141 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 198
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 199 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
>AF132856-1|AAD30062.1| 333|Homo sapiens suppressor of G2 allele of
skp1 homolog protein.
Length = 333
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = -3
Query: 452 RWDWHQTPEHVIVSVYAKKYDPVLSYVKVNPIRLNIKLIFREQGDAAFELDLELRGVINI 273
++DW+QT V++++ K + V V + + + + L LEL I
Sbjct: 141 KYDWYQTESQVVITLMIKNVQK--NDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIP 198
Query: 272 ERSSASMLGTKVEIKLKKGEPGSWSKLD 189
E+S+ +L TK+EIKLKK E W KL+
Sbjct: 199 EQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
>CR457249-1|CAG33530.1| 305|Homo sapiens FBXO34 protein.
Length = 305
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -3
Query: 623 SLCTYHPG--CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAH--KWV 486
SLC +HP C G +W CC + F PGC G H WV
Sbjct: 239 SLCRWHPKPYCQALPYGPGYWMCCHRSQKGF------PGCKLGLHDNHWV 282
>BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -3
Query: 623 SLCTYHPG--CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAH--KWV 486
SLC +HP C G +W CC + F PGC G H WV
Sbjct: 645 SLCRWHPKPYCQALPYGPGYWMCCHRSQKGF------PGCKLGLHDNHWV 688
>BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -3
Query: 623 SLCTYHPG--CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAH--KWV 486
SLC +HP C G +W CC + F PGC G H WV
Sbjct: 645 SLCRWHPKPYCQALPYGPGYWMCCHRSQKGF------PGCKLGLHDNHWV 688
>BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -3
Query: 623 SLCTYHPG--CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAH--KWV 486
SLC +HP C G +W CC + F PGC G H WV
Sbjct: 645 SLCRWHPKPYCQALPYGPGYWMCCHRSQKGF------PGCKLGLHDNHWV 688
>AK000732-1|BAA91346.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ20725 fis, clone HEP13903. ).
Length = 305
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -3
Query: 623 SLCTYHPG--CPIFHEGLKFWSCCQKRTTDFNTFLNQPGCTTGAH--KWV 486
SLC +HP C G +W CC + F PGC G H WV
Sbjct: 239 SLCRWHPKPYCQALPYGPGYWMCCHRSQKGF------PGCKLGLHDNHWV 282
>BC114338-1|AAI14339.1| 213|Homo sapiens C-type lectin domain
family 4, member C protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>BC102017-1|AAI02018.1| 213|Homo sapiens C-type lectin domain
family 4, member C protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>BC102016-1|AAI02017.1| 213|Homo sapiens C-type lectin domain
family 4, member C protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>BC102015-1|AAI02016.1| 213|Homo sapiens C-type lectin domain
family 4, member C protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>BC074968-1|AAH74968.1| 213|Homo sapiens C-type lectin domain
family 4, member C, isoform 1 protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>BC074967-1|AAH74967.1| 213|Homo sapiens C-type lectin domain
family 4, member C protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>BC015350-1|AAH15350.1| 358|Homo sapiens QTRT1 protein protein.
Length = 358
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 10 KHSLARCHKIAFREKNQY*AMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGK 189
KHS A H + + LT+ N+ +L S +SIV DF F G++ G
Sbjct: 279 KHSRAFLHALLHSDNTAALHHLTVHNIAYQLQLMSAVRTSIVEKRFPDFVRDFMGAMYGD 338
Query: 190 SSL 198
+L
Sbjct: 339 PTL 341
>AF325460-1|AAL37359.1| 182|Homo sapiens dendritic lectin b isoform
protein.
Length = 182
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 33 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 83
>AF325459-1|AAL37358.1| 213|Homo sapiens dendritic lectin protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
>AF302784-1|AAG60034.1| 379|Homo sapiens tRNA-guanine
transglycosylase protein.
Length = 379
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 10 KHSLARCHKIAFREKNQY*AMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGK 189
KHS A H + + LT+ N+ +L S +SIV DF F G++ G
Sbjct: 300 KHSRAFLHALLHSDNTAALHHLTVHNIAYQLQLMSAVRTSIVEKRFPDFVRDFMGAMYGD 359
Query: 190 SSL 198
+L
Sbjct: 360 PTL 362
>AF302783-1|AAG60033.1| 403|Homo sapiens tRNA-guanine
transglycosylase protein.
Length = 403
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 10 KHSLARCHKIAFREKNQY*AMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGK 189
KHS A H + + LT+ N+ +L S +SIV DF F G++ G
Sbjct: 324 KHSRAFLHALLHSDNTAALHHLTVHNIAYQLQLMSAVRTSIVEKRFPDFVRDFMGAMYGD 383
Query: 190 SSL 198
+L
Sbjct: 384 PTL 386
>AF293615-1|AAL37036.1| 213|Homo sapiens blood dendritic cell
antigen 2 protein protein.
Length = 213
Score = 30.3 bits (65), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 YHPGCPIFHEG--LKFWSCCQKRTTDFNTFLNQPGCTTGAHKWVKESSNAGTV 459
YHP EG ++ WSCC T F + + +TG W K N +
Sbjct: 64 YHPSLTCVMEGKDIEDWSCCPTPWTSFQS--SCYFISTGMQSWTKSQKNCSVM 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,699,366
Number of Sequences: 237096
Number of extensions: 2642350
Number of successful extensions: 5500
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5481
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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